You are here

Home

CAN33_39955-T1, CAN33_39955-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39955-T1
Unique NameCAN33_39955-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2350110..2351295+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39955-T1 ID=CAN33_39955-T1|Name=CAN33_39955-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1186bp|location=Sequence derived from alignment at NKJJ01000017.1:2350110..2351295+ (Aspergillus niger FDAARGOS_311)
ATGGCCAGCGACAGCAAGCCTGAAGTGTTCGAAGATGCTGGCGTGGCCGT
GCCGGCCACGGCCAAGCCCAGCTTTGGGGCTCGCGTGGCTAGACACTTCA
AGCGATGGTGGTGGGTGTATATCATTGCCTTGATCGTGATTGTTCTTGTG
GTGGTGCTTCCTGTGTAAGTTTCCTATCATGACAAAAGATGCCCCCCTCC
ACCCCCTATCTATTTCCGGTCTCCGACTTACATGACAAACGTGGGAAAAC
AGAGTTTACGTCGGATACCCCAAGATGGCTCAACACATCGTCAGTGATTC
CAACCTGACCGTCACATCGATGGTCATCAGTGACCCCTCACCTTCATCCT
TCGACCTCCACCAGCTGCAGGTCATTGGGTCCAACAGCTCTTTTCACCCA
ACCTTCTACACTTTCTCCGCAGCTATCAGCCTGCTGGGTTCCGCTGTCTT
CACACACGTTCAGGTGCCCCAGTTCAACGGCCACAATGGCGTTGTCATCG
ACGTCAACCAGCGTGCGAACCTGACGAACGAAACGGCATTCGCTGAGTTC
TGCAAGGCCGCCATAATGAACGAGAAGTTCCCTCTCAACGTCTACGGCAA
GCCCCAGCTAAAAGAGGGAAGTCTACCCAAGACCACGGTCACCTACAACA
AGACCGCCATGGTGACAGGTAAGCTCGCTCATTCCCCTCATCTGAAAATT
ACCCTTCACAACCCACTAACCCATAATTTTCGGCCTAGGCCTCAACAAGC
TCTCGGGCTTTGATCTCGTGGACATGTCAATTGGAACCAACAACACAGAC
GGCACCAACGCCAAAGGAACCGTCTACATCCCCAACCCCTCCGACATTAG
CATCGCCGTGGTATGCATATCCCCCACCTTCCCCTAATCCACCATAGTCA
GCATCCAACTAACCCCACATCCAACAGGGCAACCTGACTCTCAACCTGGA
GGTCAATAACACCGCCATCGGCCAAGCCTTCATCTACGACCTCACCATCG
GCCCAGGCAACAATACCGTCCCCATGACCGCCAACGTCAGCACCCTCACC
GTCGCCGGCATGCTAAGCAGCTACCCGGACTACATGCTCCCCATCGACAT
CACAGGCAACTCGAGCATCTACAACAACCAGCCCCTCCTCTACATTGAAG
AAGCGCTGGCGTCGCTCAAACTTCAAGTTCAATTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:2350110..2351295+

>CAN33_39955-T1 ID=CAN33_39955-T1|Name=CAN33_39955-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4035bp|location=Sequence derived from alignment at NKJJ01000017.1:2350110..2351295+ (Aspergillus niger FDAARGOS_311)
ATGGCCAGCGACAGCAAGCCTGAAGTGTTCGAAGATGCTGGCGTGGCCGT
GCCGGCCACGGCCAAGCCCAGCTTTGGGGCTCGCGTGGCTAGACACTTCA
AGCGATGGTGGTGGGTGTATATCATTGCCTTGATCGTGATTGTTCTTGTG
GTGGTGCTTCCTGTAGTTTACGTCGGATACCCCAAGATGGCTCAACACAT
CGTCAGTGATTCCAACCTGACCGTCACATCGATGGTCATCAGTGACCCCT
CACCTTCATCCTTCGACCTCCACCAGCTGCAGGTCATTGGGTCCAACAGC
TCTTTTCACCCAACCTTCTACACTTTCTCCGCAGCTATCAGCCTGCTGGG
TTCCGCTGTCTTCACACACGTTCAGGTGCCCCAGTTCAACGGCCACAATG
GCGTTGTCATCGACGTCAACCAGCGTGCGAACCTGACGAACGAAACGGCA
TTCGCTGAGTTCTGCAAGGCCGCCATAATGAACGAGAAGTTCCCTCTCAA
CGTCTACGGCAAGCCCCAGCTAAAAGAGGGAAGTCTACCCAAGACCACGG
TCACCTACAACAAGACCGCCATGGTGACAGGCCTCAACAAGCTCTCGGGC
TTTGATCTCGTGGACATGTCAATTGGAACCAACAACACAGACGGCACCAA
CGCCAAAGGAACCGTCTACATCCCCAACCCCTCCGACATTAGCATCGCCG
TGGGCAACCTGACTCTCAACCTGGAGGCAACTCGAGCATCTACAACAACC
AGCCCCTCCTCTACATTGAAGAAGCGCTGGCGTCGCTCAAACTTCAAGTT
CAATTGAATGGCCAGCGACAGCAAGCCTGAAGTGTTCGAAGATGCTGGCG
TGGCCGTGCCGGCCACGGCCAAGCCCAGCTTTGGGGCTCGCGTGGCTAGA
CACTTCAAGCGATGGTGGTGGGTGTATATCATTGCCTTGATCGTGATTGT
TCTTGTGGTGGTGCTTCCTGTAGTTTACGTCGGATACCCCAAGATGGCTC
AACACATCGTCAGTGATTCCAACCTGACCGTCACATCGATGGTCATCAGT
GACCCCTCACCTTCATCCTTCGACCTCCACCAGCTGCAGGTCATTGGGTC
CAACAGCTCTTTTCACCCAACCTTCTACACTTTCTCCGCAGCTATCAGCC
TGCTGGGTTCCGCTGTCTTCACACACGTTCAGGTGCCCCAGTTCAACGGC
CACAATGGCGTTGTCATCGACGTCAACCAGCGTGCGAACCTGACGAACGA
AACGGCATTCGCTGAGTTCTGCAAGGCCGCCATAATGAACGAGAAGTTCC
CTCTCAACGTCTACGGCAAGCCCCAGCTAAAAGAGGGAAGTCTACCCAAG
ACCACGGTCACCTACAACAAGACCGCCATGGTGACAGGCCTCAACAAGCT
CTCGGGCTTTGATCTCGTGGACATGTCAATTGGAACCAACAACACAGACG
GCACCAACGCCAAAGGAACCGTCTACATCCCCAACCCCTCCGACATTAGC
ATCGCCGTGGGCAACCTGACTCTCAACCTGGAGGCAACTCGAGCATCTAC
AACAACCAGCCCCTCCTCTACATTGAAGAAGCGCTGGCGTCGCTCAAACT
TCAAGTTCAATTGAATGGCCAGCGACAGCAAGCCTGAAGTGTTCGAAGAT
GCTGGCGTGGCCGTGCCGGCCACGGCCAAGCCCAGCTTTGGGGCTCGCGT
GGCTAGACACTTCAAGCGATGGTGGTGGGTGTATATCATTGCCTTGATCG
TGATTGTTCTTGTGGTGGTGCTTCCTGTAGTTTACGTCGGATACCCCAAG
ATGGCTCAACACATCGTCAGTGATTCCAACCTGACCGTCACATCGATGGT
CATCAGTGACCCCTCACCTTCATCCTTCGACCTCCACCAGCTGCAGGTCA
TTGGGTCCAACAGCTCTTTTCACCCAACCTTCTACACTTTCTCCGCAGCT
ATCAGCCTGCTGGGTTCCGCTGTCTTCACACACGTTCAGGTGCCCCAGTT
CAACGGCCACAATGGCGTTGTCATCGACGTCAACCAGCGTGCGAACCTGA
CGAACGAAACGGCATTCGCTGAGTTCTGCAAGGCCGCCATAATGAACGAG
AAGTTCCCTCTCAACGTCTACGGCAAGCCCCAGCTAAAAGAGGGAAGTCT
ACCCAAGACCACGGTCACCTACAACAAGACCGCCATGGTGACAGGCCTCA
ACAAGCTCTCGGGCTTTGATCTCGTGGACATGTCAATTGGAACCAACAAC
ACAGACGGCACCAACGCCAAAGGAACCGTCTACATCCCCAACCCCTCCGA
CATTAGCATCGCCGTGGGCAACCTGACTCTCAACCTGGAGGCAACTCGAG
CATCTACAACAACCAGCCCCTCCTCTACATTGAAGAAGCGCTGGCGTCGC
TCAAACTTCAAGTTCAATTGAATGGCCAGCGACAGCAAGCCTGAAGTGTT
CGAAGATGCTGGCGTGGCCGTGCCGGCCACGGCCAAGCCCAGCTTTGGGG
CTCGCGTGGCTAGACACTTCAAGCGATGGTGGTGGGTGTATATCATTGCC
TTGATCGTGATTGTTCTTGTGGTGGTGCTTCCTGTAGTTTACGTCGGATA
CCCCAAGATGGCTCAACACATCGTCAGTGATTCCAACCTGACCGTCACAT
CGATGGTCATCAGTGACCCCTCACCTTCATCCTTCGACCTCCACCAGCTG
CAGGTCATTGGGTCCAACAGCTCTTTTCACCCAACCTTCTACACTTTCTC
CGCAGCTATCAGCCTGCTGGGTTCCGCTGTCTTCACACACGTTCAGGTGC
CCCAGTTCAACGGCCACAATGGCGTTGTCATCGACGTCAACCAGCGTGCG
AACCTGACGAACGAAACGGCATTCGCTGAGTTCTGCAAGGCCGCCATAAT
GAACGAGAAGTTCCCTCTCAACGTCTACGGCAAGCCCCAGCTAAAAGAGG
GAAGTCTACCCAAGACCACGGTCACCTACAACAAGACCGCCATGGTGACA
GGCCTCAACAAGCTCTCGGGCTTTGATCTCGTGGACATGTCAATTGGAAC
CAACAACACAGACGGCACCAACGCCAAAGGAACCGTCTACATCCCCAACC
CCTCCGACATTAGCATCGCCGTGGGCAACCTGACTCTCAACCTGGAGGCA
ACTCGAGCATCTACAACAACCAGCCCCTCCTCTACATTGAAGAAGCGCTG
GCGTCGCTCAAACTTCAAGTTCAATTGAATGGCCAGCGACAGCAAGCCTG
AAGTGTTCGAAGATGCTGGCGTGGCCGTGCCGGCCACGGCCAAGCCCAGC
TTTGGGGCTCGCGTGGCTAGACACTTCAAGCGATGGTGGTGGGTGTATAT
CATTGCCTTGATCGTGATTGTTCTTGTGGTGGTGCTTCCTGTAGTTTACG
TCGGATACCCCAAGATGGCTCAACACATCGTCAGTGATTCCAACCTGACC
GTCACATCGATGGTCATCAGTGACCCCTCACCTTCATCCTTCGACCTCCA
CCAGCTGCAGGTCATTGGGTCCAACAGCTCTTTTCACCCAACCTTCTACA
CTTTCTCCGCAGCTATCAGCCTGCTGGGTTCCGCTGTCTTCACACACGTT
CAGGTGCCCCAGTTCAACGGCCACAATGGCGTTGTCATCGACGTCAACCA
GCGTGCGAACCTGACGAACGAAACGGCATTCGCTGAGTTCTGCAAGGCCG
CCATAATGAACGAGAAGTTCCCTCTCAACGTCTACGGCAAGCCCCAGCTA
AAAGAGGGAAGTCTACCCAAGACCACGGTCACCTACAACAAGACCGCCAT
GGTGACAGGCCTCAACAAGCTCTCGGGCTTTGATCTCGTGGACATGTCAA
TTGGAACCAACAACACAGACGGCACCAACGCCAAAGGAACCGTCTACATC
CCCAACCCCTCCGACATTAGCATCGCCGTGGGCAACCTGACTCTCAACCT
GGAGGCAACTCGAGCATCTACAACAACCAGCCCCTCCTCTACATTGAAGA
AGCGCTGGCGTCGCTCAAACTTCAAGTTCAATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39955CAN33_39955Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39955-T1CAN33_39955-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39955-T1.exon1CAN33_39955-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_39955-T1.exon2CAN33_39955-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39955-T1.exon3CAN33_39955-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_39955-T1.exon4CAN33_39955-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_39955-T1.exon5CAN33_39955-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39955-T1.cdsCAN33_39955-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR022185
DBxrefPFAM:PF12505
ProductProtein of unknown function (DUF3712) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2350110..2351295 +
Powered by Drupal