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CAN33_39960-T1, CAN33_39960-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39960-T1
Unique NameCAN33_39960-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2352136..2353523-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39960-T1 ID=CAN33_39960-T1|Name=CAN33_39960-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1388bp|location=Sequence derived from alignment at NKJJ01000017.1:2352136..2353523- (Aspergillus niger FDAARGOS_311)
ATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGA
ACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCT
ATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGA
TTGGGCTTCATTTCTCATATCTTCTACGCGTTTGCATGGTACTAGTAACC
TCAAGTCGGCACCATGCTGATGGTCCCAGTCCATACCCAGAGACAGTTGT
TAACCAGCCTGCTTTTCTCGTTCATAGGGTCAAAGAAGATGGTACCGTTT
ATGTAACCAGTCCTCTCTCCCCATTGTGAGGGGCTGCTCTGGCTGACAAG
ACATGACTTCAAAACCAGCTTAGTGACGAATGGGCCGATGCGCAAATGCC
CGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGC
AGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGC
AGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTT
TGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCG
ACGGTACGTGTAATGGAGCCGAGCCCCTCTCCCCTTATCATCATGGATGC
GTCATGTCGGTATAGTGAACAGAAAATAAGGTAAAATTGTGTGCATGCCC
TAAGGCTAACCAACCTTGTGCTGGCCCAACAGTGGATTGGGAATACCCCT
CCGACCCACAAGAAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGC
GAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGG
ACCATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTG
ACCTGATCAATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAG
TCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATG
CCAAAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGC
TCCTTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGA
GTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTA
TAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGG
GGGCAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACA
CCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGG
CGGGTTATTCTACTGGCATATTGGAGGCGACGCACGGGGACCGCGAAGTC
TGATTGAAACAGGGTATAACACATTGCATGATATGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2352136..2353523-

>CAN33_39960-T1 ID=CAN33_39960-T1|Name=CAN33_39960-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4572bp|location=Sequence derived from alignment at NKJJ01000017.1:2352136..2353523- (Aspergillus niger FDAARGOS_311)
TGGATTGGGAATACCCCTCCGACCCACAAGAAGGATCGGACTATATCCGT
CTGCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTATGTTCTGGC
CTCTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATCGATCTTTCCA
AGGCGCAACTCTATCTTGACCTGATCAATATCATGGCGTATGATTTCTCG
GGCCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTCAGCAAGCA
TCCCGCAGCCATTTCATGCCAAAACTCTATCTCGTACGTGCTCAACCAGG
GCGTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACGGCCGCTCG
TTCCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGTGGCGGTGA
AGACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGCCAAGGAGC
ATCACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAGATGGCGGC
TTCGTCACATATGACACACCCCAGACAGTGCAGCAGAAGGCGAAATTCGT
CACAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATATTGGAGGCGACG
CACGGGGACCGCGAAGTCTGATTGAAACAGGGTATAACACATTGCATGAT
ATGTAACTTAGTGACGAATGGGCCGATGCGCAAATGCCCGTCGACGGCAC
CAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGCAGTATTCCAAGA
TGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGCAGTGAGAACTTC
GCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTTTGTTCGGAGCGC
GAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCGACGTCCATACCC
AGAGACAGTTGTTAACCAGCCTGCTTTTCTCGTTCATAGGGTCAAAGAAG
ATGGTACCGTTTATATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGG
CGCAAAGCAGCCGAACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTT
CCTGAACGCTGCCTATTATCCCAATTGGAGGATATACCGGAAACAGCCTC
CGTCGGCCCTTCGATTGGGCTTCATTTCTCATATCTTCTACGCTGGATTG
GGAATACCCCTCCGACCCACAAGAAGGATCGGACTATATCCGTCTGCTGG
CGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGT
CTCCCGGCCGGACCATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCA
ACTCTATCTTGACCTGATCAATATCATGGCGTATGATTTCTCGGGCCCTT
GGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCA
GCCATTTCATGCCAAAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGA
CCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGG
GTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGC
GTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGA
CAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCA
CATATGACACACCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAG
ATGAAGCTGGGCGGGTTATTCTACTGGCATATTGGAGGCGACGCACGGGG
ACCGCGAAGTCTGATTGAAACAGGGTATAACACATTGCATGATATGTAAC
TTAGTGACGAATGGGCCGATGCGCAAATGCCCGTCGACGGCACCAACGGC
TGCCTGCGGGCCTTCGCGCAACTGAAGCCGCAGTATTCCAAGATGAAACT
CATTCTCTCAGTCGGAGGAGGCGGCAAGGGCAGTGAGAACTTCGCCCAAG
TGGCCCGCAGTCAATCCCGCACCGAGACGTTTGTTCGGAGCGCGAGAGCA
CTGGTGGATCAATTTGGTCTGGACGGCATCGACGTCCATACCCAGAGACA
GTTGTTAACCAGCCTGCTTTTCTCGTTCATAGGGTCAAAGAAGATGGTAC
CGTTTATATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAG
CAGCCGAACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAAC
GCTGCCTATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGC
CCTTCGATTGGGCTTCATTTCTCATATCTTCTACGCTGGATTGGGAATAC
CCCTCCGACCCACAAGAAGGATCGGACTATATCCGTCTGCTGGCGCGACT
GCGCGAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGG
CCGGACCATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTAT
CTTGACCTGATCAATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAA
CCAGTCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTT
CATGCCAAAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAG
AAGCTCCTTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCAC
TGGAGTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCG
ACTATAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGT
CTGGGGGCAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGA
CACACCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGC
TGGGCGGGTTATTCTACTGGCATATTGGAGGCGACGCACGGGGACCGCGA
AGTCTGATTGAAACAGGGTATAACACATTGCATGATATGTAACTTAGTGA
CGAATGGGCCGATGCGCAAATGCCCGTCGACGGCACCAACGGCTGCCTGC
GGGCCTTCGCGCAACTGAAGCCGCAGTATTCCAAGATGAAACTCATTCTC
TCAGTCGGAGGAGGCGGCAAGGGCAGTGAGAACTTCGCCCAAGTGGCCCG
CAGTCAATCCCGCACCGAGACGTTTGTTCGGAGCGCGAGAGCACTGGTGG
ATCAATTTGGTCTGGACGGCATCGACGTCCATACCCAGAGACAGTTGTTA
ACCAGCCTGCTTTTCTCGTTCATAGGGTCAAAGAAGATGGTACCGTTTAT
ATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGA
ACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCT
ATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGA
TTGGGCTTCATTTCTCATATCTTCTACGCTGGATTGGGAATACCCCTCCG
ACCCACAAGAAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGCGAA
GTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGGACC
ATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTGACC
TGATCAATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAGTCG
GGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATGCCA
AAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGCTCC
TTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGAGTT
GGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTATAG
CCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGGGGG
CAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACACCC
CAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGGCGG
GTTATTCTACTGGCATATTGGAGGCGACGCACGGGGACCGCGAAGTCTGA
TTGAAACAGGGTATAACACATTGCATGATATGTAACTTAGTGACGAATGG
GCCGATGCGCAAATGCCCGTCGACGGCACCAACGGCTGCCTGCGGGCCTT
CGCGCAACTGAAGCCGCAGTATTCCAAGATGAAACTCATTCTCTCAGTCG
GAGGAGGCGGCAAGGGCAGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAA
TCCCGCACCGAGACGTTTGTTCGGAGCGCGAGAGCACTGGTGGATCAATT
TGGTCTGGACGGCATCGACGTCCATACCCAGAGACAGTTGTTAACCAGCC
TGCTTTTCTCGTTCATAGGGTCAAAGAAGATGGTACCGTTTATATGTTCT
CCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGAACGCTCC
AGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCTATTATCC
CAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGATTGGGCT
TCATTTCTCATATCTTCTACGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39960CAN33_39960Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39960-T1CAN33_39960-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39960-T1.cdsCAN33_39960-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39960-T1.exon4CAN33_39960-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_39960-T1.exon3CAN33_39960-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_39960-T1.exon2CAN33_39960-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39960-T1.exon1CAN33_39960-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR029070
DBxrefInterPro:IPR011583
DBxrefPFAM:PF00704
ProductGlycosyl hydrolases family 18 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2352136..2353523 -
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