You are here

Home

CAN33_40015-T1, CAN33_40015-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40015-T1
Unique NameCAN33_40015-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2382800..2383591+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40015-T1 ID=CAN33_40015-T1|Name=CAN33_40015-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=792bp|location=Sequence derived from alignment at NKJJ01000017.1:2382800..2383591+ (Aspergillus niger FDAARGOS_311)
ATGAAGTTCAACAGCGCTATCGCTCTCTCCTCCCTCCTGGCTCTCGCCGT
CGCCCAGGACTCTTCCTCCACTACCAGTGCCGCGACGACCACTGCTAGCT
TGTCTCCTCAGGCTTCCTGCGCCACCAAGTGTAAGTTTCTTTCTACTCTA
TTGCTGTTCCTATCTATATCATTTCGGCATCCTGAGCTCTCCTCTTCGAT
TCCGTCCGCATACCCCAACCACCTGTGTCTTCTACACTCCATCCATCAGC
CACAACAAACAATTCGACCATAAGCAAATTGACTAACATTTTCCAGGCGC
TGAGACCGACATCTGCTGCATCGCCAACTGCTACAGCGTTCCTTGCCCCG
ACAACGCCATGGCCAACGACACCACCAGCTGCGTTGCTGCCTGCCCCAGG
GCTCCGGCTCCCCCAGCGACCAGCGCTCCTACGCCAGTTGCCAGAGCAGC
TGCTACAGCAGCTACTTCTTTCCCGCCAGTGCCACGGGAGCGTCGGGCTC
TTCCGCTACCACTGCCGGCTCCAACGACGCCAGCACCACGAAGAGTGGAA
GCTCCTCTTCGTCGACCGGCTCCAGTACGTCCACTTCTACCTCCTCTTAT
ATTGCCCATGCTCTATGACTAACCCCACCTTTAACAACAGACTCTAACTC
CAAGTCTGGCTCCTCCGGAACTAGCACCGCAACTGGCGCTCATGCCAGCA
GCACCGAGAACGCCGCTGCTGTTGCGCAGCTCAAGCTGGGCGTTTCCGCT
GCTGGTGTACTTGGATTCGTCCTGGCTGCTTGGGCTCTGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:2382800..2383591+

>CAN33_40015-T1 ID=CAN33_40015-T1|Name=CAN33_40015-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1992bp|location=Sequence derived from alignment at NKJJ01000017.1:2382800..2383591+ (Aspergillus niger FDAARGOS_311)
ATGAAGTTCAACAGCGCTATCGCTCTCTCCTCCCTCCTGGCTCTCGCCGT
CGCCCAGGACTCTTCCTCCACTACCAGTGCCGCGACGACCACTGCTAGCT
TGTCTCCTCAGGCTTCCTGCGCCACCAAGTGCGCTGAGACCGACATCTGC
TGCATCGCCAACTGCTACAGCGGCTCCGGCTCCCCCAGCGACCAGCGCTC
CTACGCCAGTTGCCAGAGCAGCTGCTACAGCAGCTACTTCTTTCCCGCCA
GTGCCACGGGAGCGTCGGGCTCTTCCGCTACCACTGCCGGCTCCAACGAC
GCCAGCACCACGAAGAGTGGAAGCTCCTCTTCGTCGACCGGCTCCAACTC
TAACTCCAAGTCTGGCTCCTCCGGAACTAGCACCGCAACTGGCGCTCATG
CCAGCAGCACCGAGAACGCCGCTGCTGTTGCGCAGCTCAAGCTGGGCGTT
TCCGCTGCTGGTGTACTTGGATTCGTCCTGGCTGCTTGGGCTCTGTAAAT
GAAGTTCAACAGCGCTATCGCTCTCTCCTCCCTCCTGGCTCTCGCCGTCG
CCCAGGACTCTTCCTCCACTACCAGTGCCGCGACGACCACTGCTAGCTTG
TCTCCTCAGGCTTCCTGCGCCACCAAGTGCGCTGAGACCGACATCTGCTG
CATCGCCAACTGCTACAGCGGCTCCGGCTCCCCCAGCGACCAGCGCTCCT
ACGCCAGTTGCCAGAGCAGCTGCTACAGCAGCTACTTCTTTCCCGCCAGT
GCCACGGGAGCGTCGGGCTCTTCCGCTACCACTGCCGGCTCCAACGACGC
CAGCACCACGAAGAGTGGAAGCTCCTCTTCGTCGACCGGCTCCAACTCTA
ACTCCAAGTCTGGCTCCTCCGGAACTAGCACCGCAACTGGCGCTCATGCC
AGCAGCACCGAGAACGCCGCTGCTGTTGCGCAGCTCAAGCTGGGCGTTTC
CGCTGCTGGTGTACTTGGATTCGTCCTGGCTGCTTGGGCTCTGTAAATGA
AGTTCAACAGCGCTATCGCTCTCTCCTCCCTCCTGGCTCTCGCCGTCGCC
CAGGACTCTTCCTCCACTACCAGTGCCGCGACGACCACTGCTAGCTTGTC
TCCTCAGGCTTCCTGCGCCACCAAGTGCGCTGAGACCGACATCTGCTGCA
TCGCCAACTGCTACAGCGGCTCCGGCTCCCCCAGCGACCAGCGCTCCTAC
GCCAGTTGCCAGAGCAGCTGCTACAGCAGCTACTTCTTTCCCGCCAGTGC
CACGGGAGCGTCGGGCTCTTCCGCTACCACTGCCGGCTCCAACGACGCCA
GCACCACGAAGAGTGGAAGCTCCTCTTCGTCGACCGGCTCCAACTCTAAC
TCCAAGTCTGGCTCCTCCGGAACTAGCACCGCAACTGGCGCTCATGCCAG
CAGCACCGAGAACGCCGCTGCTGTTGCGCAGCTCAAGCTGGGCGTTTCCG
CTGCTGGTGTACTTGGATTCGTCCTGGCTGCTTGGGCTCTGTAAATGAAG
TTCAACAGCGCTATCGCTCTCTCCTCCCTCCTGGCTCTCGCCGTCGCCCA
GGACTCTTCCTCCACTACCAGTGCCGCGACGACCACTGCTAGCTTGTCTC
CTCAGGCTTCCTGCGCCACCAAGTGCGCTGAGACCGACATCTGCTGCATC
GCCAACTGCTACAGCGGCTCCGGCTCCCCCAGCGACCAGCGCTCCTACGC
CAGTTGCCAGAGCAGCTGCTACAGCAGCTACTTCTTTCCCGCCAGTGCCA
CGGGAGCGTCGGGCTCTTCCGCTACCACTGCCGGCTCCAACGACGCCAGC
ACCACGAAGAGTGGAAGCTCCTCTTCGTCGACCGGCTCCAACTCTAACTC
CAAGTCTGGCTCCTCCGGAACTAGCACCGCAACTGGCGCTCATGCCAGCA
GCACCGAGAACGCCGCTGCTGTTGCGCAGCTCAAGCTGGGCGTTTCCGCT
GCTGGTGTACTTGGATTCGTCCTGGCTGCTTGGGCTCTGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40015CAN33_40015Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40015-T1.exon1CAN33_40015-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_40015-T1.exon2CAN33_40015-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40015-T1.exon3CAN33_40015-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40015-T1.exon4CAN33_40015-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40015-T1.cdsCAN33_40015-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40015-T1CAN33_40015-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2382800..2383591 +
Powered by Drupal