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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2391042..2393736+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40030-T1 ID=CAN33_40030-T1|Name=CAN33_40030-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2695bp|location=Sequence derived from alignment at NKJJ01000017.1:2391042..2393736+ (Aspergillus niger FDAARGOS_311) ATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGAGTGCCTACTCCGCC
CCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTCCCGCAAACGCTCAC
CTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCTCGCCCCCGGGTGAT
TCACTAAAAGACGGTGCGGATGCACCGCGCATCGATCCTGAACGCGCGAT
TGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCAACATGAGAAGCAGG
AGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGCAGGCTGCGGCTAAA
GCAGAATATGAGAAGCTTTTGAACATGCGATCGGGTGGTACCTATATTCC
TCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTACGGACAAGACCAGCA
AGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGAAGTCGATCAACGGT
CTCATCAACAAGGTCAACGTTTCCAACATCAAGTTTATCGTCCCGGAGCT
TTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTTTTGCAGAAGTATCA
TGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTATCTACGCCGCCATG
GCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGCGAGCTGTTGCTCAA
CCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAGAAACGACAAGGCAG
TCTGCATATCTTCCACGACCTTCATTGCCCATCTGTGCAACCAGCAGGTC
GCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTGCTGCTTCACAAGCC
CACGGATGACAGTGTCGAGATTGCTGTCGGCCTGACTCGAGAGGTTGGTC
AGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGGCGGTGTTTGATCAA
TTCCGAAATATCCTTCACGAAGCCGACATCGACAAGCGAGTACAGTATAT
GATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTATAAGGACAACCCGG
CGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAGACCAAATAACGCAT
CAGATCGGACTCGATGACGAGATTGAGACACAAGATTCCCTCAATATCTT
CAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGCCTACAAGAAATTGA
AGGCAGAGATTCTGGGTGAAGGAAGTGATGACGAGGAGGACGACGAAGAC
GAGTCAGACGAGAGCTCCGATGAAGAGTCGGAGGAAGAGCGGAAGATGGA
CATTAAAGACCAGACCAACACAGACCTCGTGAACCTGCGGAGGACGATAT
ACCTGACGATCATGTCGAGTATCGATTTCGAAGAATGCTGTCACAAGCTG
ATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAGCTCCCGTCAATGAT
CATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAAGTTCTACGGCTTGA
TCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGTCCGATCTCTTCGAA
GCTGCATTTGCCAAGTACTACGACACCATCCATCGCTACGAGACAAACCG
ACTCCGCAATATTGCCCGCTTCTTCGGCCATATGATTAGCAATGACGCGA
TTGGCTGGCATGTCATGTCGATCATCCACATGAACGAGGAGGAGACGACA
TCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAAGACCTCGGAGAACA
CCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGACGAGATCCTGCGTC
CCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCCGCAACACGCGCTTC
TCAATCAACTACTTCACCAGTATCGGCATGGGTATGCTGACGGAGGACAT
GCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGATGCCTGCATTGCCCC
AACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCGTGGTATCTCACCCA
ACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCCCGCTCCCGCTCCTA
CTCCTACTCCCGCTCTCCTTCCCCGGCCGTGGCCGCAGACGCTCCGTCAG
CCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGATCCTCACGCCGCAGCT
ACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCCCCGGCGCCCAAATCC
CGCCGACGCTCCGTCTCATACAGTCGATCCCCCGCAGAAGATCCTCCGTG
TCCCCAACACCCCCTCCTCGCCGGACACGCGATCGCTCCTACGATTCCCG
CTCTCCCAGACGCTCGCTCTCCCGGTCCGTCACCCCTCCGCCTCGCAGCA
AGCGAGATACCCACGCCCGCCGAGACAGAAGCTACTCCAGATCCGTCTCC
CGATCTGTCTCCCCTCCTCCACGTCAGGCTGCCGGAGGTGCCGCTCGGTA
CTCGGAGTCTCCTCCTCCCCGCCGGCGGGTCGAAAGGAGCGTCTCCGCGT
CTCGCTCTCCTTCCCGTTCTCGTTCTCGTACTCCGGAGCGTCGTGCCCCG
CCTGGTCGTCGTGCCCCCCGTGATGCTTCAGTCTCGCGCTCGCGCTCCCC
TACCCCGCCGCGCGGTGGTGGTCGTCGTGGCGATGCTGCCCCTCGTCGTC
GTCGCTACTCTGACTCGTTGTCTCCGTCGCGGTCTCCGCCGCCGAGACGG
CACAGGTCTCCGTCTAGAACGCCTCCCCGTCGGGTGCGCGATTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2391042..2393736+ >CAN33_40030-T1 ID=CAN33_40030-T1|Name=CAN33_40030-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7263bp|location=Sequence derived from alignment at NKJJ01000017.1:2391042..2393736+ (Aspergillus niger FDAARGOS_311) ATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGAGTGCCTACTCCGCC CCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTCCCGCAAACGCTCAC CTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCTCGCCCCCGGGTGAT TCACTAAAAGACGGTGCGGATGCACCGCGCATCGATCCTGAACGCGCGAT TGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCAACATGAGAAGCAGG AGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGCAGGCTGCGGCTAAA GCAGAATATGAGAAGCTTTTGAACATGCGATCGGGTGGTACCTATATTCC TCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTACGGACAAGACCAGCA AGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGAAGTCGATCAACGGT CTCATCAACAAGGTCAACGTTTCCAACATCAAGTTTATCGTCCCGGAGCT TTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTTTTGCAGAAGTATCA TGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTATCTACGCCGCCATG GCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGCGAGCTGTTGCTCAA CCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAGAAACGACAAGGCAG TCTGCATATCTTCCACGACCTTCATTGCCCATCTGTGCAACCAGCAGGTC GCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTGCTGCTTCACAAGCC CACGGATGACAGTGTCGAGATTGCTGTCGGCCTGACTCGAGAGGTTGGTC AGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGGCGGTGTTTGATCAA TTCCGAAATATCCTTCACGAAGCCGACATCGACAAGCGAGTACAGTATAT GATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTATAAGGACAACCCGG CGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAGACCAAATAACGCAT CAGATCGGACTCGATGACGAGATTGAGACACAAGATTCCCTCAATATCTT CAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGCCTACAAGAAATTGA AGGCAGAGATTCTGGAGTCGGAGGAAGAGCGGAAGATGGACATTAAAGAC CAGACCAACACAGACCTCGTGAACCTGCGGAGGACGATATACCTGACGAT CATGTCGAGTATCGATTTCGAAGAATGCTGTCACAAGCTGATGAAGATCT CGCTGCCCGCTGGCCTCGAGCCCGAGCTCCCGTCAATGATCATCGAGTGT TGCTCCCAGGAGCGCACGTATTCGAAGTTCTACGGCTTGATCGGAGAGCG CTTCGCAAAGATCAACCGGCTCTGGTCCGATCTCTTCGAAGCTGCATTTG CCAAGTACTACGACACCATCCATCGCTACGAGACAAACCGACTCCGCAAT ATTGCCCGCTTCTTCGGCCATATGATTAGCAATGACGCGATTGGCTGGCA TGTCATGTCGATCATCCACATGAACGAGGAGGAGACGACATCAAGCAGCC GTATCTTCATCAAGATCCTCTTCCAAGACCTCGGAGAACACCTGGGCCTG CCCAAACTGCAGGAACGCATGCGGGACGAGATCCTGCGTCCCAGCTTCGA GGGCCTCTTCCCACTGGACAATCCCCGCAACACGCGCTTCTCAATCAACT ACTTCACCAGTATCGGCATGGGTATGCTGACGGAGGACATGCGCGAGCAC CTAAAAAACCTCCCCAAGCCCACGATGCCTGCATTGCCCCAACGCGATGC CGGCGCCGACTCCGACTCCGAGTCCGTGGTATCTCACCCAACCAGCTGCT CAACCTGTACTCCTCGCTCTCGCTCCCGCTCCCGCTCCTACTCCTACTCC CGCTCTCCTTCCCCGGCCGTGGCCGCAGACGCTCCGTCAGCCGCGGCCGA TCCTACAGCCGCTCCGTGTCCGGATCCTCACGCCGCAGCTACAGCTACAC CCCTTCGCGGTCCAGGTCCCGATCCCCGGCGCCCAAATCCCGCCGACGCT CCGTCTCATACAGTCGATCCCCCGCAGAAGATCCTCCGTGTCCCCAACAC CCCCTCCTCGCCGGACACGCGATCGCTCCTACGATTCCCGCTCTCCCAGA CGCTCGCTCTCCCGCGTCGTGCCCCGCCTGGTCGTCGTGCCCCCCGTGAT GCTTCAGTCTCGCGCTCGCGCTCCCCTACCCCGCCGCGCGGTGGTGGTCG TCGTGGCGATGCTGCCCCTCGTCGTCGTCGCTACTCTGACTCGTTGTCTC CGTCGCGGTCTCCGCCGCCGAGACGGCACAGGTCTCCGTCTAGAACGCCT CCCCGTCGGGTGCGCGATTAGATGACGGACCCTGTTGTCTTGCAGTCGGC GGTGCGAGTGCCTACTCCGCCCCCAGGCACTTCCTACTCTCCTCAGGCCT CGGGTTCCCGCAAACGCTCACCTCCCTCTCGGTCTCCTTCGCCGAATCGT CGTCGCTCGCCCCCGGGTGATTCACTAAAAGACGGTGCGGATGCACCGCG CATCGATCCTGAACGCGCGATTGAAAGAGAGCGACAGCTCGCCGAGCGCC TTCGCCAACATGAGAAGCAGGAGGCTGCTCGAAAGCCAATGACGGAGGAG GAAAAGCAGGCTGCGGCTAAAGCAGAATATGAGAAGCTTTTGAACATGCG ATCGGGTGGTACCTATATTCCTCCTGCGCGACTACGGGCGCTGCAGGCGC AGATTACGGACAAGACCAGCAAGGAGTACCAGCGGATGGCATGGGAGGCT CTTAAGAAGTCGATCAACGGTCTCATCAACAAGGTCAACGTTTCCAACAT CAAGTTTATCGTCCCGGAGCTTTTTGGGGAGAACTTGGTGCGCGGTCGCG GTCTGTTTTGCAGAAGTATCATGAAAGCTCAGGCGGCCAGTTTGCCCTTC ACACCTATCTACGCCGCCATGGCGGCTATTGTGAACACCAAACTGCCCCA AGTCGGCGAGCTGTTGCTCAACCGTCTCATTGTCCAGTTCCGAAAGGCGT TCAAGAGAAACGACAAGGCAGTCTGCATATCTTCCACGACCTTCATTGCC CATCTGTGCAACCAGCAGGTCGCGCACGAGATGCTGGCCGCGCAGATTCT TCTTTTGCTGCTTCACAAGCCCACGGATGACAGTGTCGAGATTGCTGTCG GCCTGACTCGAGAGGTTGGTCAGCATCTGGAGGAGATGAGCGGTCCTATT GCCCTGGCGGTGTTTGATCAATTCCGAAATATCCTTCACGAAGCCGACAT CGACAAGCGAGTACAGTATATGATTGAGGTGTTGTTCCAGGTCCGGAAAG ATAGGTATAAGGACAACCCGGCGATCAAGGAAGAATTGGACCTGATCGAG GAGGAAGACCAAATAACGCATCAGATCGGACTCGATGACGAGATTGAGAC ACAAGATTCCCTCAATATCTTCAAGTACGATGCCGAATGGGAGGAGCACG AAGAGGCCTACAAGAAATTGAAGGCAGAGATTCTGGAGTCGGAGGAAGAG CGGAAGATGGACATTAAAGACCAGACCAACACAGACCTCGTGAACCTGCG GAGGACGATATACCTGACGATCATGTCGAGTATCGATTTCGAAGAATGCT GTCACAAGCTGATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAGCTC CCGTCAATGATCATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAAGTT CTACGGCTTGATCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGTCCG ATCTCTTCGAAGCTGCATTTGCCAAGTACTACGACACCATCCATCGCTAC GAGACAAACCGACTCCGCAATATTGCCCGCTTCTTCGGCCATATGATTAG CAATGACGCGATTGGCTGGCATGTCATGTCGATCATCCACATGAACGAGG AGGAGACGACATCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAAGAC CTCGGAGAACACCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGACGA GATCCTGCGTCCCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCCGCA ACACGCGCTTCTCAATCAACTACTTCACCAGTATCGGCATGGGTATGCTG ACGGAGGACATGCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGATGCC TGCATTGCCCCAACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCGTGG TATCTCACCCAACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCCCGC TCCCGCTCCTACTCCTACTCCCGCTCTCCTTCCCCGGCCGTGGCCGCAGA CGCTCCGTCAGCCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGATCCTC ACGCCGCAGCTACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCCCCGG CGCCCAAATCCCGCCGACGCTCCGTCTCATACAGTCGATCCCCCGCAGAA GATCCTCCGTGTCCCCAACACCCCCTCCTCGCCGGACACGCGATCGCTCC TACGATTCCCGCTCTCCCAGACGCTCGCTCTCCCGCGTCGTGCCCCGCCT GGTCGTCGTGCCCCCCGTGATGCTTCAGTCTCGCGCTCGCGCTCCCCTAC CCCGCCGCGCGGTGGTGGTCGTCGTGGCGATGCTGCCCCTCGTCGTCGTC GCTACTCTGACTCGTTGTCTCCGTCGCGGTCTCCGCCGCCGAGACGGCAC AGGTCTCCGTCTAGAACGCCTCCCCGTCGGGTGCGCGATTAGATGACGGA CCCTGTTGTCTTGCAGTCGGCGGTGCGAGTGCCTACTCCGCCCCCAGGCA CTTCCTACTCTCCTCAGGCCTCGGGTTCCCGCAAACGCTCACCTCCCTCT CGGTCTCCTTCGCCGAATCGTCGTCGCTCGCCCCCGGGTGATTCACTAAA AGACGGTGCGGATGCACCGCGCATCGATCCTGAACGCGCGATTGAAAGAG AGCGACAGCTCGCCGAGCGCCTTCGCCAACATGAGAAGCAGGAGGCTGCT CGAAAGCCAATGACGGAGGAGGAAAAGCAGGCTGCGGCTAAAGCAGAATA TGAGAAGCTTTTGAACATGCGATCGGGTGGTACCTATATTCCTCCTGCGC GACTACGGGCGCTGCAGGCGCAGATTACGGACAAGACCAGCAAGGAGTAC CAGCGGATGGCATGGGAGGCTCTTAAGAAGTCGATCAACGGTCTCATCAA CAAGGTCAACGTTTCCAACATCAAGTTTATCGTCCCGGAGCTTTTTGGGG AGAACTTGGTGCGCGGTCGCGGTCTGTTTTGCAGAAGTATCATGAAAGCT CAGGCGGCCAGTTTGCCCTTCACACCTATCTACGCCGCCATGGCGGCTAT TGTGAACACCAAACTGCCCCAAGTCGGCGAGCTGTTGCTCAACCGTCTCA TTGTCCAGTTCCGAAAGGCGTTCAAGAGAAACGACAAGGCAGTCTGCATA TCTTCCACGACCTTCATTGCCCATCTGTGCAACCAGCAGGTCGCGCACGA GATGCTGGCCGCGCAGATTCTTCTTTTGCTGCTTCACAAGCCCACGGATG ACAGTGTCGAGATTGCTGTCGGCCTGACTCGAGAGGTTGGTCAGCATCTG GAGGAGATGAGCGGTCCTATTGCCCTGGCGGTGTTTGATCAATTCCGAAA TATCCTTCACGAAGCCGACATCGACAAGCGAGTACAGTATATGATTGAGG TGTTGTTCCAGGTCCGGAAAGATAGGTATAAGGACAACCCGGCGATCAAG GAAGAATTGGACCTGATCGAGGAGGAAGACCAAATAACGCATCAGATCGG ACTCGATGACGAGATTGAGACACAAGATTCCCTCAATATCTTCAAGTACG ATGCCGAATGGGAGGAGCACGAAGAGGCCTACAAGAAATTGAAGGCAGAG ATTCTGGAGTCGGAGGAAGAGCGGAAGATGGACATTAAAGACCAGACCAA CACAGACCTCGTGAACCTGCGGAGGACGATATACCTGACGATCATGTCGA GTATCGATTTCGAAGAATGCTGTCACAAGCTGATGAAGATCTCGCTGCCC GCTGGCCTCGAGCCCGAGCTCCCGTCAATGATCATCGAGTGTTGCTCCCA GGAGCGCACGTATTCGAAGTTCTACGGCTTGATCGGAGAGCGCTTCGCAA AGATCAACCGGCTCTGGTCCGATCTCTTCGAAGCTGCATTTGCCAAGTAC TACGACACCATCCATCGCTACGAGACAAACCGACTCCGCAATATTGCCCG CTTCTTCGGCCATATGATTAGCAATGACGCGATTGGCTGGCATGTCATGT CGATCATCCACATGAACGAGGAGGAGACGACATCAAGCAGCCGTATCTTC ATCAAGATCCTCTTCCAAGACCTCGGAGAACACCTGGGCCTGCCCAAACT GCAGGAACGCATGCGGGACGAGATCCTGCGTCCCAGCTTCGAGGGCCTCT TCCCACTGGACAATCCCCGCAACACGCGCTTCTCAATCAACTACTTCACC AGTATCGGCATGGGTATGCTGACGGAGGACATGCGCGAGCACCTAAAAAA CCTCCCCAAGCCCACGATGCCTGCATTGCCCCAACGCGATGCCGGCGCCG ACTCCGACTCCGAGTCCGTGGTATCTCACCCAACCAGCTGCTCAACCTGT ACTCCTCGCTCTCGCTCCCGCTCCCGCTCCTACTCCTACTCCCGCTCTCC TTCCCCGGCCGTGGCCGCAGACGCTCCGTCAGCCGCGGCCGATCCTACAG CCGCTCCGTGTCCGGATCCTCACGCCGCAGCTACAGCTACACCCCTTCGC GGTCCAGGTCCCGATCCCCGGCGCCCAAATCCCGCCGACGCTCCGTCTCA TACAGTCGATCCCCCGCAGAAGATCCTCCGTGTCCCCAACACCCCCTCCT CGCCGGACACGCGATCGCTCCTACGATTCCCGCTCTCCCAGACGCTCGCT CTCCCGCGTCGTGCCCCGCCTGGTCGTCGTGCCCCCCGTGATGCTTCAGT CTCGCGCTCGCGCTCCCCTACCCCGCCGCGCGGTGGTGGTCGTCGTGGCG ATGCTGCCCCTCGTCGTCGTCGCTACTCTGACTCGTTGTCTCCGTCGCGG TCTCCGCCGCCGAGACGGCACAGGTCTCCGTCTAGAACGCCTCCCCGTCG GGTGCGCGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
| GO:0005515 | protein binding |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
| Note | BUSCO:EOG09263WM5 |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR016021 |
| DBxref | InterPro:IPR003891 |
| DBxref | InterPro:IPR003890 |
| DBxref | PFAM:PF02847 |
| Product | pre-mRNA-splicing factor cwc22 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2391042..2393736 + |
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