You are here

Home

CAN33_40050-T1, CAN33_40050-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40050-T1
Unique NameCAN33_40050-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2405483..2406283-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40050-T1 ID=CAN33_40050-T1|Name=CAN33_40050-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=801bp|location=Sequence derived from alignment at NKJJ01000017.1:2405483..2406283- (Aspergillus niger FDAARGOS_311)
ATGGCCGGATCTGCCCCCAACCTCTACAGCTTCCTCAGCAACGACGCTTT
GGCCCAGCAATTGAGGCCCTACGTCCTGCGGTGTCAGAACTCGGCCCTCA
GCCGTCACAGCACATTCCGCGTCGCAGTCTCTGGTGGCTCCCTTCCGAAA
GTTCTCGCCCAAGCTCTATTGGCCCCTGGAAATGGATCCCCCGAAGATAC
CGCTCAGTTCTCCAAGTGGGACATCTTCTTTGCCGATGAGCGCGCCGTGC
CCCTCGATCACGAAGACAGCAACTACCGCCTGCTGAAGGAAGAGCTGCTG
AACAAGATTCCCTCGGAGCTGGGTGCCCCGACCGTGCACACGATCGACGC
CGATCACGTCAACGATGAAGACCCGCAGGAGCTGGCGGATTTGTACCAGG
AAGAGCTGATGCGCTCCTTTGCCGCCAAGGATAGCGTCAAGCTGCCCGTT
TTCGATCTAATCCTTCTGGGATGCGGCCCCGACGGCCACACTTGCAGTCT
CTTCCCCGGACACGAATTGCTGCGGGAGAAGGATGCCTGGGTGGCTGCCA
TCAGCGACTCTCCTAAGCCGCCCCCGAAGCGCATTACCTTGACTTTGCCC
GTGGTGACGCATGCCCTCAACATCGCCTTTGTTGCTACTGGCGGTGGAAA
GAAGGATATCATGAAGCAGATTTTCGACGCCGAGGAGGGGAGAGACCTGC
CCTCCACTCTCGTCAACCAGGGTGGTGGCGAGAAGGTGAGCTGGTTCACC
GATAATGCGGCTGTGGAGGGAGTCGCTTTCCCCCGACGTGGAAGCCTGTA
A
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:2405483..2406283-

>CAN33_40050-T1 ID=CAN33_40050-T1|Name=CAN33_40050-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=801bp|location=Sequence derived from alignment at NKJJ01000017.1:2405483..2406283- (Aspergillus niger FDAARGOS_311)
ATGGCCGGATCTGCCCCCAACCTCTACAGCTTCCTCAGCAACGACGCTTT
GGCCCAGCAATTGAGGCCCTACGTCCTGCGGTGTCAGAACTCGGCCCTCA
GCCGTCACAGCACATTCCGCGTCGCAGTCTCTGGTGGCTCCCTTCCGAAA
GTTCTCGCCCAAGCTCTATTGGCCCCTGGAAATGGATCCCCCGAAGATAC
CGCTCAGTTCTCCAAGTGGGACATCTTCTTTGCCGATGAGCGCGCCGTGC
CCCTCGATCACGAAGACAGCAACTACCGCCTGCTGAAGGAAGAGCTGCTG
AACAAGATTCCCTCGGAGCTGGGTGCCCCGACCGTGCACACGATCGACGC
CGATCACGTCAACGATGAAGACCCGCAGGAGCTGGCGGATTTGTACCAGG
AAGAGCTGATGCGCTCCTTTGCCGCCAAGGATAGCGTCAAGCTGCCCGTT
TTCGATCTAATCCTTCTGGGATGCGGCCCCGACGGCCACACTTGCAGTCT
CTTCCCCGGACACGAATTGCTGCGGGAGAAGGATGCCTGGGTGGCTGCCA
TCAGCGACTCTCCTAAGCCGCCCCCGAAGCGCATTACCTTGACTTTGCCC
GTGGTGACGCATGCCCTCAACATCGCCTTTGTTGCTACTGGCGGTGGAAA
GAAGGATATCATGAAGCAGATTTTCGACGCCGAGGAGGGGAGAGACCTGC
CCTCCACTCTCGTCAACCAGGGTGGTGGCGAGAAGGTGAGCTGGTTCACC
GATAATGCGGCTGTGGAGGGAGTCGCTTTCCCCCGACGTGGAAGCCTGTA
A
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00170576-phosphogluconolactonase activity
Vocabulary: Biological Process
TermDefinition
GO:0006098pentose-phosphate shunt
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40050CAN33_40050Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40050-T1.cdsCAN33_40050-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40050-T1.exon1CAN33_40050-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40050-T1CAN33_40050-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037171
DBxrefInterPro:IPR005900
DBxrefInterPro:IPR006148
DBxrefPFAM:PF01182
Product6-phosphogluconolactonase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2405483..2406283 -
Powered by Drupal