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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2421578..2423369- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40065-T1 ID=CAN33_40065-T1|Name=CAN33_40065-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1792bp|location=Sequence derived from alignment at NKJJ01000017.1:2421578..2423369- (Aspergillus niger FDAARGOS_311)
ATGGCGCCCTCCGAATCCTCTTCTTCTCCCTCGTCCTTCCATCCCACCCA
GGCCCAGCTTAATCTCGCTGCTCTGGCTGGGTCACCTTCACCGCGGACCA
TGCGAGGCTTGCGCAAGATCCAGTCTCACCAAATCCTCTCATCTCACCCA
CCTTCCTCAGCTCATCCGCCGTCGGGGCGCTTGTCTGCTGGCGCCGGGGA
GCTCGCCCAACCTCCTCAGCTGGACTCGCCCGTGCGACTGCGCTCGCAAC
GCCGGGCGCGCTCCAACAGCGATGCCTCGTCTCGGGAGGCCCCTGCGATA
GGAACTCAAAAGCGATCGGCCAGAAAGACAGGTTCTGGGTTTGGAGTCAA
GCGCTCGGTCTTGGAGACTCTCCTCCGGGACGGTCCGCACCAGGGCAACC
TTCAGGAGGGTCTCCAGGAGCTCCGGTACCTCGTTCTCTCGACACGAGTC
GAAGCAGACGCGGATGGCATGGTATAATAGCCCGACCCCCCTCCCCCTCG
TGCTCATTCTGCCCCTCGTGGAATGAAGAGCAACACGTCCACTAACACTA
TCGCGACAGTCCACCTACCGAATCTACCTTTGGCTCGTCCTTCTCGATGT
TTCTCCTGTTCCAACCGACGAATACCTCTCCCTCATCCACCGTGGTCGCT
CGCCAGCCTACACGAAAATCCGCAATGATACATTCCGCACCATGGCCACA
GACCCCCTATTCAAACGCCGCGTCACAGAAGCCAGCTTGATCCGGCTTCT
CAACGCTGTCGCATGGAAACTTCACGACGCGAAGAACAAATACCGGTCGC
GATCGCGTCCGTCGTCCCGTCTTCGAGAGATTGAGCTCTTAATCAACACA
CCCCGAGCATTGAAGAAGAACCCTCCCCATCCGGAACACCAGGTAGCGTT
GCCAGCAGTCGCGGCGGCGGCAGCGGGATTACAAACGAATCTGCGATCTA
CGTCCAAGGCATGAACGTGCTCTGCGCTCCGTTCCTCTACGCCGCCCGCA
GCGAAGTCGAGGCCTTTGCTCTGTTCCACTCGTTCATTACACGCGAATGT
CCTGGTTACATCCGCGGCGCCATGGATGGGGTCCATCGAGGTCTGCGCTT
GGTCGACCAATGTTTAGAGATCGTCGAACCCAAATTAGCGGCGTACCTCT
TCTCCAAGGGCCTACAGGCGAAATTGTATGCATTTCCGTCGGTGTTGACC
CTCTGTGCGTGCACGCCTCCTCTTCCGGAGGTGCTTCATCTTTGGGACTT
TTTGTTCGCATACGGAACGCACCTAAATATCTTGTGTATTGTGGCGCAAT
TGATTCGAATGAGGGACACGATCCTGGAAAGTCCGAAGTATGTTTACTTT
TTGTTTTTTCTTAACATTTTCCCTTGCCTTTTACCTTTCCTACTCTGGTT
CATTCCCCTTTTCATGTTTTCTTTTGTTTTTCTCGTCCGCCTCATCCTCT
CGAAAAAGCAATACCATACCACCAAAAACAAAACAAAAGACGGGGAAAAA
TAAGACAAATCACATCCCTCAGAGCACAGCCCCGACACACAAGTCCCTCT
GAGAGAATAATTCTCCTGGGCATGATATGATACCCCCCAAACCCAAAACA
AAGCCCGCAGCAGATATCCCAGAGACATTGTGATGTGAGGTAACAGCGCT
AACGTGATCCATCCACAGTCCCAACAAAATCCTCCGATCCTTCCCACCAC
TCGACGCCAAAGAGATCATCGCCCTGACGGTCCTGATCGTCCGCAAGATC
CCCGAGCCGCTGTACGCTGAATTAATCGACCATGCCAAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2421578..2423369- >CAN33_40065-T1 ID=CAN33_40065-T1|Name=CAN33_40065-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5256bp|location=Sequence derived from alignment at NKJJ01000017.1:2421578..2423369- (Aspergillus niger FDAARGOS_311)
TCCCAACAAAATCCTCCGATCCTTCCCACCACTCGACGCCAAAGAGATCA
TCGCCCTGACGGTCCTGATCGTCCGCAAGATCCCCGAGCCGCTGTACGCT
GAATTAATCGACCATGCCAAATGAAAGAACCCTCCCCATCCGGAACACCA
GGTAGCGTTGCCAGCAGTCGCGGCGGCGGCAGCGGGATTACAAACGAATC
TGCGATCTACGTCCAAGGCATGAACGTGCTCTGCGCTCCGTTCCTCTACG
CCGCCCGCAGCGAAGTCGAGGCCTTTGCTCTGTTCCACTCGTTCATTACA
CGCGAATGTCCTGGTTACATCCGCGGCGCCATGGATGGGGTCCATCGAGG
TCTGCGCTTGGTCGACCAATGTTTAGAGATCGTCGAACCCAAATTAGCGG
CGTACCTCTTCTCCAAGGGCCTACAGGCGAAATTGTATGCATTTCCGTCG
GTGTTGACCCTCTGTGCGTGCACGCCTCCTCTTCCGGAGGTGCTTCATCT
TTGGGACTTTTTGTTCGCATACGGAACGCACCTAAATATCTTGTGTATTG
TGGCGCAATTGATTCGAATGAGGGACACGATCCTGGAAAGTCCGAATCCA
CCTACCGAATCTACCTTTGGCTCGTCCTTCTCGATGTTTCTCCTGTTCCA
ACCGACGAATACCTCTCCCTCATCCACCGTGGTCGCTCGCCAGCCTACAC
GAAAATCCGCAATGATACATTCCGCACCATGGCCACAGACCCCCTATTCA
AACGCCGCGTCACAGAAGCCAGCTTGATCCGGCTTCTCAACGCTGTCGCA
TGGAAACTTCACGACGCGAAGAACAAATACCGGTCGCGATCGCATGGCGC
CCTCCGAATCCTCTTCTTCTCCCTCGTCCTTCCATCCCACCCAGGCCCAG
CTTAATCTCGCTGCTCTGGCTGGGTCACCTTCACCGCGGACCATGCGAGG
CTTGCGCAAGATCCAGTCTCACCAAATCCTCTCATCTCACCCACCTTCCT
CAGCTCATCCGCCGTCGGGGCGCTTGTCTGCTGGCGCCGGGGAGCTCGCC
CAACCTCCTCAGCTGGACTCGCCCGTGCGACTGCGCTCGCAACGCCGGGC
GCGCTCCAACAGCGATGCCTCGTCTCGGGAGGCCCCTGCGATAGGAACTC
AAAAGCGATCGGCCAGAAAGACAGGTTCTGGGTTTGGAGTCAAGCGCTCG
GTCTTGGAGACTCTCCTCCGGGACGGTCCGCACCAGGGCAACCTTCAGGA
GGGTCTCCAGGAGCTCCGGTACCTCGTTCTCTCGACACGAGTCGAAGCAG
ACGCGGATGGCATGTCCCAACAAAATCCTCCGATCCTTCCCACCACTCGA
CGCCAAAGAGATCATCGCCCTGACGGTCCTGATCGTCCGCAAGATCCCCG
AGCCGCTGTACGCTGAATTAATCGACCATGCCAAATGAAAGAACCCTCCC
CATCCGGAACACCAGGTAGCGTTGCCAGCAGTCGCGGCGGCGGCAGCGGG
ATTACAAACGAATCTGCGATCTACGTCCAAGGCATGAACGTGCTCTGCGC
TCCGTTCCTCTACGCCGCCCGCAGCGAAGTCGAGGCCTTTGCTCTGTTCC
ACTCGTTCATTACACGCGAATGTCCTGGTTACATCCGCGGCGCCATGGAT
GGGGTCCATCGAGGTCTGCGCTTGGTCGACCAATGTTTAGAGATCGTCGA
ACCCAAATTAGCGGCGTACCTCTTCTCCAAGGGCCTACAGGCGAAATTGT
ATGCATTTCCGTCGGTGTTGACCCTCTGTGCGTGCACGCCTCCTCTTCCG
GAGGTGCTTCATCTTTGGGACTTTTTGTTCGCATACGGAACGCACCTAAA
TATCTTGTGTATTGTGGCGCAATTGATTCGAATGAGGGACACGATCCTGG
AAAGTCCGAATCCACCTACCGAATCTACCTTTGGCTCGTCCTTCTCGATG
TTTCTCCTGTTCCAACCGACGAATACCTCTCCCTCATCCACCGTGGTCGC
TCGCCAGCCTACACGAAAATCCGCAATGATACATTCCGCACCATGGCCAC
AGACCCCCTATTCAAACGCCGCGTCACAGAAGCCAGCTTGATCCGGCTTC
TCAACGCTGTCGCATGGAAACTTCACGACGCGAAGAACAAATACCGGTCG
CGATCGCATGGCGCCCTCCGAATCCTCTTCTTCTCCCTCGTCCTTCCATC
CCACCCAGGCCCAGCTTAATCTCGCTGCTCTGGCTGGGTCACCTTCACCG
CGGACCATGCGAGGCTTGCGCAAGATCCAGTCTCACCAAATCCTCTCATC
TCACCCACCTTCCTCAGCTCATCCGCCGTCGGGGCGCTTGTCTGCTGGCG
CCGGGGAGCTCGCCCAACCTCCTCAGCTGGACTCGCCCGTGCGACTGCGC
TCGCAACGCCGGGCGCGCTCCAACAGCGATGCCTCGTCTCGGGAGGCCCC
TGCGATAGGAACTCAAAAGCGATCGGCCAGAAAGACAGGTTCTGGGTTTG
GAGTCAAGCGCTCGGTCTTGGAGACTCTCCTCCGGGACGGTCCGCACCAG
GGCAACCTTCAGGAGGGTCTCCAGGAGCTCCGGTACCTCGTTCTCTCGAC
ACGAGTCGAAGCAGACGCGGATGGCATGTCCCAACAAAATCCTCCGATCC
TTCCCACCACTCGACGCCAAAGAGATCATCGCCCTGACGGTCCTGATCGT
CCGCAAGATCCCCGAGCCGCTGTACGCTGAATTAATCGACCATGCCAAAT
GAAAGAACCCTCCCCATCCGGAACACCAGGTAGCGTTGCCAGCAGTCGCG
GCGGCGGCAGCGGGATTACAAACGAATCTGCGATCTACGTCCAAGGCATG
AACGTGCTCTGCGCTCCGTTCCTCTACGCCGCCCGCAGCGAAGTCGAGGC
CTTTGCTCTGTTCCACTCGTTCATTACACGCGAATGTCCTGGTTACATCC
GCGGCGCCATGGATGGGGTCCATCGAGGTCTGCGCTTGGTCGACCAATGT
TTAGAGATCGTCGAACCCAAATTAGCGGCGTACCTCTTCTCCAAGGGCCT
ACAGGCGAAATTGTATGCATTTCCGTCGGTGTTGACCCTCTGTGCGTGCA
CGCCTCCTCTTCCGGAGGTGCTTCATCTTTGGGACTTTTTGTTCGCATAC
GGAACGCACCTAAATATCTTGTGTATTGTGGCGCAATTGATTCGAATGAG
GGACACGATCCTGGAAAGTCCGAATCCACCTACCGAATCTACCTTTGGCT
CGTCCTTCTCGATGTTTCTCCTGTTCCAACCGACGAATACCTCTCCCTCA
TCCACCGTGGTCGCTCGCCAGCCTACACGAAAATCCGCAATGATACATTC
CGCACCATGGCCACAGACCCCCTATTCAAACGCCGCGTCACAGAAGCCAG
CTTGATCCGGCTTCTCAACGCTGTCGCATGGAAACTTCACGACGCGAAGA
ACAAATACCGGTCGCGATCGCATGGCGCCCTCCGAATCCTCTTCTTCTCC
CTCGTCCTTCCATCCCACCCAGGCCCAGCTTAATCTCGCTGCTCTGGCTG
GGTCACCTTCACCGCGGACCATGCGAGGCTTGCGCAAGATCCAGTCTCAC
CAAATCCTCTCATCTCACCCACCTTCCTCAGCTCATCCGCCGTCGGGGCG
CTTGTCTGCTGGCGCCGGGGAGCTCGCCCAACCTCCTCAGCTGGACTCGC
CCGTGCGACTGCGCTCGCAACGCCGGGCGCGCTCCAACAGCGATGCCTCG
TCTCGGGAGGCCCCTGCGATAGGAACTCAAAAGCGATCGGCCAGAAAGAC
AGGTTCTGGGTTTGGAGTCAAGCGCTCGGTCTTGGAGACTCTCCTCCGGG
ACGGTCCGCACCAGGGCAACCTTCAGGAGGGTCTCCAGGAGCTCCGGTAC
CTCGTTCTCTCGACACGAGTCGAAGCAGACGCGGATGGCATGTCCCAACA
AAATCCTCCGATCCTTCCCACCACTCGACGCCAAAGAGATCATCGCCCTG
ACGGTCCTGATCGTCCGCAAGATCCCCGAGCCGCTGTACGCTGAATTAAT
CGACCATGCCAAATGAAAGAACCCTCCCCATCCGGAACACCAGGTAGCGT
TGCCAGCAGTCGCGGCGGCGGCAGCGGGATTACAAACGAATCTGCGATCT
ACGTCCAAGGCATGAACGTGCTCTGCGCTCCGTTCCTCTACGCCGCCCGC
AGCGAAGTCGAGGCCTTTGCTCTGTTCCACTCGTTCATTACACGCGAATG
TCCTGGTTACATCCGCGGCGCCATGGATGGGGTCCATCGAGGTCTGCGCT
TGGTCGACCAATGTTTAGAGATCGTCGAACCCAAATTAGCGGCGTACCTC
TTCTCCAAGGGCCTACAGGCGAAATTGTATGCATTTCCGTCGGTGTTGAC
CCTCTGTGCGTGCACGCCTCCTCTTCCGGAGGTGCTTCATCTTTGGGACT
TTTTGTTCGCATACGGAACGCACCTAAATATCTTGTGTATTGTGGCGCAA
TTGATTCGAATGAGGGACACGATCCTGGAAAGTCCGAATCCACCTACCGA
ATCTACCTTTGGCTCGTCCTTCTCGATGTTTCTCCTGTTCCAACCGACGA
ATACCTCTCCCTCATCCACCGTGGTCGCTCGCCAGCCTACACGAAAATCC
GCAATGATACATTCCGCACCATGGCCACAGACCCCCTATTCAAACGCCGC
GTCACAGAAGCCAGCTTGATCCGGCTTCTCAACGCTGTCGCATGGAAACT
TCACGACGCGAAGAACAAATACCGGTCGCGATCGCATGGCGCCCTCCGAA
TCCTCTTCTTCTCCCTCGTCCTTCCATCCCACCCAGGCCCAGCTTAATCT
CGCTGCTCTGGCTGGGTCACCTTCACCGCGGACCATGCGAGGCTTGCGCA
AGATCCAGTCTCACCAAATCCTCTCATCTCACCCACCTTCCTCAGCTCAT
CCGCCGTCGGGGCGCTTGTCTGCTGGCGCCGGGGAGCTCGCCCAACCTCC
TCAGCTGGACTCGCCCGTGCGACTGCGCTCGCAACGCCGGGCGCGCTCCA
ACAGCGATGCCTCGTCTCGGGAGGCCCCTGCGATAGGAACTCAAAAGCGA
TCGGCCAGAAAGACAGGTTCTGGGTTTGGAGTCAAGCGCTCGGTCTTGGA
GACTCTCCTCCGGGACGGTCCGCACCAGGGCAACCTTCAGGAGGGTCTCC
AGGAGCTCCGGTACCTCGTTCTCTCGACACGAGTCGAAGCAGACGCGGAT
GGCATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| Note | BUSCO:EOG09263KVG |
| DBxref | InterPro:IPR035969 |
| DBxref | InterPro:IPR000195 |
| DBxref | PFAM:PF00566 |
| Product | Rab-GTPase-TBC domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2421578..2423369 - |
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