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CAN33_40105-T1, CAN33_40105-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40105-T1
Unique NameCAN33_40105-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2447727..2449550-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40105-T1 ID=CAN33_40105-T1|Name=CAN33_40105-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1824bp|location=Sequence derived from alignment at NKJJ01000017.1:2447727..2449550- (Aspergillus niger FDAARGOS_311)
ATGGCAACTCAGCTAGAGATTTTCGTGAGGGCGCTTTCTCGGTATGTTTT
TTTTCCCTCTGAATCTCTCGCCTTATCTCTTTTGTACAATGTACTAACAC
ACCATGGCAATGCAGCCTACTCGGCTGGATATAGTACGTCTTTAAGCCCG
AAGTTCTCAGGGAAGATACTATCACGACAGGCGTGAGACTTCAGGAGATT
ATACATACTGATTACCTCTCTTCAGCACGTTCTGTTGGTCTGCGTCCTTC
TATCCCCAGCCGATCAACAACTTCCGGCGACGGTCGACAACGGGGCTGGC
AATCGACTTTCCTACCATCAACGTGCTGGGCTTCGTGTGCTATACCATAT
ATACTTCCGCTTTCCTTTACTCTCCCGTGATCCGTCATCAATATGCTGCT
CGTCACCCACTTGCTGAGGACCCGACCGTGCGCTTCAACGACTTTGCCTT
CGCCCTACATGCTGTCGTCCTTAGCTTCATCACGTATACACAGTTCTGGC
CATTCATCTGGGGGTTCAAGGTCTCTCGCCATCAGAAAGTTAGCAAGCCG
GTAGCAGGCCTTTTCTGGGGCTCTATAGTCGGCGTCACGATCGTGATCTT
CATCGTTCTCGGTCAGAGCCCAAATAACGGCTATGACCCATACTCCTGGG
CGTGGATCGATGTTGTAAGTAGCCCAAGGATTTGGAAATGGCTATCCCGC
ATGTGCTCTAACCCCTAACTCCTGGGTCAATCTAGATATATGCCCTTTCT
TACGTGAAACTGGTCATCACCATCGTGAAGTACGTACCTCAAGCGTGGGT
TAACTATAAGCGTAAATCCACATACGGCTGGAGTATCGGACAGATCTTAT
TTGATTTGTCTGGGGGTGTCTTATCCCTTGCCCAGTTGCTGCTGGATTCT
AGCTTCCAAGATGACTGGAGTGGAGTCACAGGAAATCCCATCAAGTTCCT
TTTGTCGAACGTTACCATCTTTTTCGATCTGATCTTTGTGGTACAGCACT
ATATCCTCTACAGAGATGCAGAGGACGATAGCGGTAAGGACCGGAACCCG
AGTGATCGGACTCCTTTGTTGTCCGTGTCCGACGGACAGCCCGGGCGCAG
TTAGTGTTTAGACTTCCGTCTCTCGTGGTGGTCAAATGTCAGAAATTTGG
AACGCTTCGGCGGCCCCGACCCGTCGGCGGTCCCGGTTTCTTGGATGGAT
TGAATATAAGCACGTTGTTTTTGTTTGGAGGGTCTTGTGTGTCATGTGAA
GAGCATCGAGCTGGTTGACATAAATTTTCGCTTTTACGATTTTCGGTCGG
ATGATGACTGAGGCTGAGATTCTGTGACATGTATGACCTCATAGACCTCT
CCGCCAACACAGCCGAACGGAGCAACCGTCTGGGAAAATGGCTGTAGCTC
GTATACAGTGTCTACGGCCTGGATGACCATGCGAAGCTCAAAATAGTCAT
GTGTGTTGGTTGGGGAGGAATGATAGAACGGCTTATCAATTGCGACAATG
TATTTTTGGAACAATGTCTTTGGCTCTCTCCGCGAAAGTGTATCTACACA
TCCACACCGCGATGTAACATGGCAGTGACACGCGATCTAACCCGGCCTAG
GCCAGATCTGCAAACTCGATGGAGGTCAGTCCAAGAAGACTCAAAGACTA
CTGGACCTGGCGACACCGCTCTTTGGCACCCGGTCCATGCTGACAGCGAC
CCTCTTTCCGGGCCTTCCTGCGTGCAATCCTCCAGTCCCGGGGCCCCGTC
ACCTAGAAATACTGGCAACCAAGGCCCGACGGCAGGGATCGTGGGCACAA
AGGCTTAAGTCCATCTGGCGGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2447727..2449550-

>CAN33_40105-T1 ID=CAN33_40105-T1|Name=CAN33_40105-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5430bp|location=Sequence derived from alignment at NKJJ01000017.1:2447727..2449550- (Aspergillus niger FDAARGOS_311)
GCCAGATCTGCAAACTCGATGGAGGTCAGTCCAAGAAGACTCAAAGACTA
CTGGACCTGGCGACACCGCTCTTTGGCACCCGGTCCATGCTGACAGCGAC
CCTCTTTCCGGGCCTTCCTGCGTGCAATCCTCCAGTCCCGGGGCCCCGTC
ACCTAGAAATACTGGCAACCAAGGCCCGACGGCAGGGATCGTGGGCACAA
AGGCTTAAGTCCATCTGGCGGTAAATATATGCCCTTTCTTACGTGAAACT
GGTCATCACCATCGTGAAGTACGTACCTCAAGCGTGGGTTAACTATAAGC
GTAAATCCACATACGGCTGGAGTATCGGACAGATCTTATTTGATTTGTCT
GGGGGTGTCTTATCCCTTGCCCAGTTGCTGCTGGATTCTAGCTTCCAAGA
TGACTGGAGTGGAGTCACAGGAAATCCCATCAAGTTCCTTTTGTCGAACG
TTACCATCTTTTTCGATCTGATCTTTGTGGTACAGCACTATATCCTCTAC
AGAGATGCAGAGGACGATAGCGGTAAGGACCGGAACCCGAGTGATCGGAC
TCCTTTGTTGTCCGTGTCCGACGGACAGCCCGGGCGCACACGTTCTGTTG
GTCTGCGTCCTTCTATCCCCAGCCGATCAACAACTTCCGGCGACGGTCGA
CAACGGGGCTGGCAATCGACTTTCCTACCATCAACGTGCTGGGCTTCGTG
TGCTATACCATATATACTTCCGCTTTCCTTTACTCTCCCGTGATCCGTCA
TCAATATGCTGCTCGTCACCCACTTGCTGAGGACCCGACCGTGCGCTTCA
ACGACTTTGCCTTCGCCCTACATGCTGTCGTCCTTAGCTTCATCACGTAT
ACACAGTTCTGGCCATTCATCTGGGGGTTCAAGGTCTCTCGCCATCAGAA
AGTTAGCAAGCCGGTAGCAGGCCTTTTCTGGGGCTCTATAGTCGGCGTCA
CGATCGTGATCTTCATCGTTCTCGGTCAGAGCCCAAATAACGGCTATGAC
CCATACTCCTGGGCGTGGATCGATGTTCCTACTCGGCTGGATATAATGGC
AACTCAGCTAGAGATTTTCGTGAGGGCGCTTTCTCGGCCAGATCTGCAAA
CTCGATGGAGGTCAGTCCAAGAAGACTCAAAGACTACTGGACCTGGCGAC
ACCGCTCTTTGGCACCCGGTCCATGCTGACAGCGACCCTCTTTCCGGGCC
TTCCTGCGTGCAATCCTCCAGTCCCGGGGCCCCGTCACCTAGAAATACTG
GCAACCAAGGCCCGACGGCAGGGATCGTGGGCACAAAGGCTTAAGTCCAT
CTGGCGGTAAATATATGCCCTTTCTTACGTGAAACTGGTCATCACCATCG
TGAAGTACGTACCTCAAGCGTGGGTTAACTATAAGCGTAAATCCACATAC
GGCTGGAGTATCGGACAGATCTTATTTGATTTGTCTGGGGGTGTCTTATC
CCTTGCCCAGTTGCTGCTGGATTCTAGCTTCCAAGATGACTGGAGTGGAG
TCACAGGAAATCCCATCAAGTTCCTTTTGTCGAACGTTACCATCTTTTTC
GATCTGATCTTTGTGGTACAGCACTATATCCTCTACAGAGATGCAGAGGA
CGATAGCGGTAAGGACCGGAACCCGAGTGATCGGACTCCTTTGTTGTCCG
TGTCCGACGGACAGCCCGGGCGCACACGTTCTGTTGGTCTGCGTCCTTCT
ATCCCCAGCCGATCAACAACTTCCGGCGACGGTCGACAACGGGGCTGGCA
ATCGACTTTCCTACCATCAACGTGCTGGGCTTCGTGTGCTATACCATATA
TACTTCCGCTTTCCTTTACTCTCCCGTGATCCGTCATCAATATGCTGCTC
GTCACCCACTTGCTGAGGACCCGACCGTGCGCTTCAACGACTTTGCCTTC
GCCCTACATGCTGTCGTCCTTAGCTTCATCACGTATACACAGTTCTGGCC
ATTCATCTGGGGGTTCAAGGTCTCTCGCCATCAGAAAGTTAGCAAGCCGG
TAGCAGGCCTTTTCTGGGGCTCTATAGTCGGCGTCACGATCGTGATCTTC
ATCGTTCTCGGTCAGAGCCCAAATAACGGCTATGACCCATACTCCTGGGC
GTGGATCGATGTTCCTACTCGGCTGGATATAATGGCAACTCAGCTAGAGA
TTTTCGTGAGGGCGCTTTCTCGGCCAGATCTGCAAACTCGATGGAGGTCA
GTCCAAGAAGACTCAAAGACTACTGGACCTGGCGACACCGCTCTTTGGCA
CCCGGTCCATGCTGACAGCGACCCTCTTTCCGGGCCTTCCTGCGTGCAAT
CCTCCAGTCCCGGGGCCCCGTCACCTAGAAATACTGGCAACCAAGGCCCG
ACGGCAGGGATCGTGGGCACAAAGGCTTAAGTCCATCTGGCGGTAAATAT
ATGCCCTTTCTTACGTGAAACTGGTCATCACCATCGTGAAGTACGTACCT
CAAGCGTGGGTTAACTATAAGCGTAAATCCACATACGGCTGGAGTATCGG
ACAGATCTTATTTGATTTGTCTGGGGGTGTCTTATCCCTTGCCCAGTTGC
TGCTGGATTCTAGCTTCCAAGATGACTGGAGTGGAGTCACAGGAAATCCC
ATCAAGTTCCTTTTGTCGAACGTTACCATCTTTTTCGATCTGATCTTTGT
GGTACAGCACTATATCCTCTACAGAGATGCAGAGGACGATAGCGGTAAGG
ACCGGAACCCGAGTGATCGGACTCCTTTGTTGTCCGTGTCCGACGGACAG
CCCGGGCGCACACGTTCTGTTGGTCTGCGTCCTTCTATCCCCAGCCGATC
AACAACTTCCGGCGACGGTCGACAACGGGGCTGGCAATCGACTTTCCTAC
CATCAACGTGCTGGGCTTCGTGTGCTATACCATATATACTTCCGCTTTCC
TTTACTCTCCCGTGATCCGTCATCAATATGCTGCTCGTCACCCACTTGCT
GAGGACCCGACCGTGCGCTTCAACGACTTTGCCTTCGCCCTACATGCTGT
CGTCCTTAGCTTCATCACGTATACACAGTTCTGGCCATTCATCTGGGGGT
TCAAGGTCTCTCGCCATCAGAAAGTTAGCAAGCCGGTAGCAGGCCTTTTC
TGGGGCTCTATAGTCGGCGTCACGATCGTGATCTTCATCGTTCTCGGTCA
GAGCCCAAATAACGGCTATGACCCATACTCCTGGGCGTGGATCGATGTTC
CTACTCGGCTGGATATAATGGCAACTCAGCTAGAGATTTTCGTGAGGGCG
CTTTCTCGGCCAGATCTGCAAACTCGATGGAGGTCAGTCCAAGAAGACTC
AAAGACTACTGGACCTGGCGACACCGCTCTTTGGCACCCGGTCCATGCTG
ACAGCGACCCTCTTTCCGGGCCTTCCTGCGTGCAATCCTCCAGTCCCGGG
GCCCCGTCACCTAGAAATACTGGCAACCAAGGCCCGACGGCAGGGATCGT
GGGCACAAAGGCTTAAGTCCATCTGGCGGTAAATATATGCCCTTTCTTAC
GTGAAACTGGTCATCACCATCGTGAAGTACGTACCTCAAGCGTGGGTTAA
CTATAAGCGTAAATCCACATACGGCTGGAGTATCGGACAGATCTTATTTG
ATTTGTCTGGGGGTGTCTTATCCCTTGCCCAGTTGCTGCTGGATTCTAGC
TTCCAAGATGACTGGAGTGGAGTCACAGGAAATCCCATCAAGTTCCTTTT
GTCGAACGTTACCATCTTTTTCGATCTGATCTTTGTGGTACAGCACTATA
TCCTCTACAGAGATGCAGAGGACGATAGCGGTAAGGACCGGAACCCGAGT
GATCGGACTCCTTTGTTGTCCGTGTCCGACGGACAGCCCGGGCGCACACG
TTCTGTTGGTCTGCGTCCTTCTATCCCCAGCCGATCAACAACTTCCGGCG
ACGGTCGACAACGGGGCTGGCAATCGACTTTCCTACCATCAACGTGCTGG
GCTTCGTGTGCTATACCATATATACTTCCGCTTTCCTTTACTCTCCCGTG
ATCCGTCATCAATATGCTGCTCGTCACCCACTTGCTGAGGACCCGACCGT
GCGCTTCAACGACTTTGCCTTCGCCCTACATGCTGTCGTCCTTAGCTTCA
TCACGTATACACAGTTCTGGCCATTCATCTGGGGGTTCAAGGTCTCTCGC
CATCAGAAAGTTAGCAAGCCGGTAGCAGGCCTTTTCTGGGGCTCTATAGT
CGGCGTCACGATCGTGATCTTCATCGTTCTCGGTCAGAGCCCAAATAACG
GCTATGACCCATACTCCTGGGCGTGGATCGATGTTCCTACTCGGCTGGAT
ATAATGGCAACTCAGCTAGAGATTTTCGTGAGGGCGCTTTCTCGGCCAGA
TCTGCAAACTCGATGGAGGTCAGTCCAAGAAGACTCAAAGACTACTGGAC
CTGGCGACACCGCTCTTTGGCACCCGGTCCATGCTGACAGCGACCCTCTT
TCCGGGCCTTCCTGCGTGCAATCCTCCAGTCCCGGGGCCCCGTCACCTAG
AAATACTGGCAACCAAGGCCCGACGGCAGGGATCGTGGGCACAAAGGCTT
AAGTCCATCTGGCGGTAAATATATGCCCTTTCTTACGTGAAACTGGTCAT
CACCATCGTGAAGTACGTACCTCAAGCGTGGGTTAACTATAAGCGTAAAT
CCACATACGGCTGGAGTATCGGACAGATCTTATTTGATTTGTCTGGGGGT
GTCTTATCCCTTGCCCAGTTGCTGCTGGATTCTAGCTTCCAAGATGACTG
GAGTGGAGTCACAGGAAATCCCATCAAGTTCCTTTTGTCGAACGTTACCA
TCTTTTTCGATCTGATCTTTGTGGTACAGCACTATATCCTCTACAGAGAT
GCAGAGGACGATAGCGGTAAGGACCGGAACCCGAGTGATCGGACTCCTTT
GTTGTCCGTGTCCGACGGACAGCCCGGGCGCACACGTTCTGTTGGTCTGC
GTCCTTCTATCCCCAGCCGATCAACAACTTCCGGCGACGGTCGACAACGG
GGCTGGCAATCGACTTTCCTACCATCAACGTGCTGGGCTTCGTGTGCTAT
ACCATATATACTTCCGCTTTCCTTTACTCTCCCGTGATCCGTCATCAATA
TGCTGCTCGTCACCCACTTGCTGAGGACCCGACCGTGCGCTTCAACGACT
TTGCCTTCGCCCTACATGCTGTCGTCCTTAGCTTCATCACGTATACACAG
TTCTGGCCATTCATCTGGGGGTTCAAGGTCTCTCGCCATCAGAAAGTTAG
CAAGCCGGTAGCAGGCCTTTTCTGGGGCTCTATAGTCGGCGTCACGATCG
TGATCTTCATCGTTCTCGGTCAGAGCCCAAATAACGGCTATGACCCATAC
TCCTGGGCGTGGATCGATGTTCCTACTCGGCTGGATATAATGGCAACTCA
GCTAGAGATTTTCGTGAGGGCGCTTTCTCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40105CAN33_40105Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40105-T1CAN33_40105-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40105-T1.cdsCAN33_40105-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40105-T1.exon5CAN33_40105-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_40105-T1.exon4CAN33_40105-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_40105-T1.exon3CAN33_40105-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40105-T1.exon2CAN33_40105-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40105-T1.exon1CAN33_40105-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR006603
DBxrefPFAM:PF04193
ProductPQ loop repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2447727..2449550 -
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