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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2460738..2462237- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40130-T1 ID=CAN33_40130-T1|Name=CAN33_40130-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1500bp|location=Sequence derived from alignment at NKJJ01000017.1:2460738..2462237- (Aspergillus niger FDAARGOS_311)
ATGGAGGTAGCTAGCGCGCAACAGCCTTCTCTTCAACTAGACGCCTCCAA
CGCTGCCCCGGTTGCTGACACAATGGACGCCTCCATGGATATTGACATGG
ACATTGATCTTGGACCCCTTCCAGAAGCAGAACCAATTGAGACTGTGAGT
ATTACTATTGTCTGATCTATTACAGGTTCCAGTCGTCCACTCCTAACGTC
TTCGTCGACTGTCCAGGAACAAACTCTCGTGGCAACGACTGCTGTTCAAG
ATGGATCCATCGACCCTCTTAATGAGGAGGCACAGTATGAAAAGGTTCAT
ATACGCGGTGTAGATGAGTTGACGACAGACAACATCAAACAATTCGCTGT
CGAACACTTCGCCCTTGAGGAGCCAAGCCGCGTTGAATGGATCGATGACA
CATCAGCGAACATCCTATACTCTTCGCCGGAGGTTGGTCTTCAAGCTCTG
TCAGCATTTACGCAGGTTAGCGAGGAGGAGGATGCATCCGCGTTGCCTGC
TCTACGGTTGCGATCCGCGAAGCTCCTCTCTACCCACCCCGACTCTGTGC
TCCAGGTTAGGTCAGCTGTCAAGGCGGATCGCAAAAAGCCTCGTGCGCAC
GAAGCCAGTCGGTTTTACCTCATGCACCCTGAACATGACCCTCGGGAACG
CTTGCGACGAGAATTTGCAGATAGGCGACGCTCGGGAGGTGGAGACGTCA
GTGACGGGGATTATAGACGAAGACGGTTTGATGGTCGAGAACTGCAACGT
CGGAGAGACCGTGATGCAGGCGAGAGCTTCAGTGCCAATATGTATGATGA
CACGGTGCCTGCCAGCCGCGACCGCTCGTCGGACCGCAGTCGCGAAAGGC
GGGGAAGACGAGGGGGGCGCGATCTATTCCCACAGGAAGAAGGACGATTG
TCTGGTCGCCTTCGCAACCGTAGCGCGTCACCCGGTCGAGATACACTGAT
GGAAGGCGGGTATGCTGAGGACGATCGGCAGGATCGCAGACGGTTCCGCG
ACCGGTCGCCCCAGCTCGGTCGCCGCAATGAAGGCAAGGAGCTCTTCCCA
TCCTCGGGAGCCAAAAGCAGCGATGCAAATGCGCGGGAGCTCTTCCCGAA
CCGAACAGCCAAGGAACTCTTTCCTCAAAAAGTTAGCAATCATCGCCGTT
CAGACGCGATCGATGGCGCAGATGAGACGGCAGATCTCTTCTCGCGGAGG
ATTTCAGTGCCTCTTGTTGATGGCAGCCAAGACCAACAACCTGCGCGCCG
AAAGCGCGACATTGAGCTTTTCCCTGAGACGACCGAGACAAGCGGTCTCA
ACATCCGCGGGGCAGCAAGGCAGGATCAGGGAATGTCGATTCGTGGTGCG
GCAAATGGCATCTCAATCAAAGGACGGGGCGCGTCTGTTCGTGAACTGTT
CCCTAATAAATACGGTTCCAACGCAGGCAAGGAGTTGTTTTCCGATAAGA
TTGAGGGGCGAGGAGGACCACGACGCAGGGCGGAGGACATGTTTAGCTGA
back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2460738..2462237- >CAN33_40130-T1 ID=CAN33_40130-T1|Name=CAN33_40130-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2856bp|location=Sequence derived from alignment at NKJJ01000017.1:2460738..2462237- (Aspergillus niger FDAARGOS_311)
GAACAAACTCTCGTGGCAACGACTGCTGTTCAAGATGGATCCATCGACCC
TCTTAATGAGGAGGCACAGTATGAAAAGGTTCATATACGCGGTGTAGATG
AGTTGACGACAGACAACATCAAACAATTCGCTGTCGAACACTTCGCCCTT
GAGGAGCCAAGCCGCGTTGAATGGATCGATGACACATCAGCGAACATCCT
ATACTCTTCGCCGGAGGTTGGTCTTCAAGCTCTGTCAGCATTTACGCAGG
TTAGCGAGGAGGAGGATGCATCCGCGTTGCCTGCTCTACGGTTGCGATCC
GCGAAGCTCCTCTCTACCCACCCCGACTCTGTGCTCCAGGTTAGGTCAGC
TGTCAAGGCGGATCGCAAAAAGCCTCGTGCGCACGAAGCCAGTCGGTTTT
ACCTCATGCACCCTGAACATGACCCTCGGGAACGCTTGCGACGAGAATTT
GCAGATAGGCGACGCTCGGGAGGTGGAGACGTCAGTGACGGGGATTATAG
ACGAAGACGGTTTGATGGTCGAGAACTGCAACGTCGGAGAGACCGTGATG
CAGGCGAGAGCTTCAGTGCCAATATGTATGATGACACGGTGCCTGCCAGC
CGCGACCGCTCGTCGGACCGCAGTCGCGAAAGGCGGGGAAGACGAGGGGG
GCGCGATCTATTCCCACAGGAAGAAGGACGATTGTCTGGTCGCCTTCGCA
ACCGTAGCGCGTCACCCGGTCGAGATACACTGATGGAAGGCGGGTATGCT
GAGGACGATCGGCAGGATCGCAGACGGTTCCGCGACCGGTCGCCCCAGCT
CGGTCGCCGCAATGAAGGCAAGGAGCTCTTCCCATCCTCGGGAGCCAAAA
GCAGCGATGCAAATGCGCGGGAGCTCTTCCCGAACCGAACAGCCAAGGAA
CTCTTTCCTCAAAAAGTTAGCAATCATCGCCGTTCAGACGCGATCGATGG
CGCAGATGAGACGGCAGATCTCTTCTCGCGGAGGATTTCAGTGCCTCTTG
TTGATGGCAGCCAAGACCAACAACCTGCGCGCCGAAAGCGCGACATTGAG
CTTTTCCCTGAGACGACCGAGACAAGCGGTCTCAACATCCGCGGGGCAGC
AAGGCAGGATCAGGGAATGTCGATTCGTGGTGCGGCAAATGGCATCTCAA
TCAAAGGACGGGGCGCGTCTGTTCGTGAACTGTTCCCTAATAAATACGGT
TCCAACGCAGGCAAGGAGTTGTTTTCCGATAAGATTGAGGGGCGAGGAGG
ACCACGACGCAGGGCGGAGGACATGTTTAGCTGAATGGAGGTAGCTAGCG
CGCAACAGCCTTCTCTTCAACTAGACGCCTCCAACGCTGCCCCGGTTGCT
GACACAATGGACGCCTCCATGGATATTGACATGGACATTGATCTTGGACC
CCTTCCAGAAGCAGAACCAATTGAGACTGAACAAACTCTCGTGGCAACGA
CTGCTGTTCAAGATGGATCCATCGACCCTCTTAATGAGGAGGCACAGTAT
GAAAAGGTTCATATACGCGGTGTAGATGAGTTGACGACAGACAACATCAA
ACAATTCGCTGTCGAACACTTCGCCCTTGAGGAGCCAAGCCGCGTTGAAT
GGATCGATGACACATCAGCGAACATCCTATACTCTTCGCCGGAGGTTGGT
CTTCAAGCTCTGTCAGCATTTACGCAGGTTAGCGAGGAGGAGGATGCATC
CGCGTTGCCTGCTCTACGGTTGCGATCCGCGAAGCTCCTCTCTACCCACC
CCGACTCTGTGCTCCAGGTTAGGTCAGCTGTCAAGGCGGATCGCAAAAAG
CCTCGTGCGCACGAAGCCAGTCGGTTTTACCTCATGCACCCTGAACATGA
CCCTCGGGAACGCTTGCGACGAGAATTTGCAGATAGGCGACGCTCGGGAG
GTGGAGACGTCAGTGACGGGGATTATAGACGAAGACGGTTTGATGGTCGA
GAACTGCAACGTCGGAGAGACCGTGATGCAGGCGAGAGCTTCAGTGCCAA
TATGTATGATGACACGGTGCCTGCCAGCCGCGACCGCTCGTCGGACCGCA
GTCGCGAAAGGCGGGGAAGACGAGGGGGGCGCGATCTATTCCCACAGGAA
GAAGGACGATTGTCTGGTCGCCTTCGCAACCGTAGCGCGTCACCCGGTCG
AGATACACTGATGGAAGGCGGGTATGCTGAGGACGATCGGCAGGATCGCA
GACGGTTCCGCGACCGGTCGCCCCAGCTCGGTCGCCGCAATGAAGGCAAG
GAGCTCTTCCCATCCTCGGGAGCCAAAAGCAGCGATGCAAATGCGCGGGA
GCTCTTCCCGAACCGAACAGCCAAGGAACTCTTTCCTCAAAAAGTTAGCA
ATCATCGCCGTTCAGACGCGATCGATGGCGCAGATGAGACGGCAGATCTC
TTCTCGCGGAGGATTTCAGTGCCTCTTGTTGATGGCAGCCAAGACCAACA
ACCTGCGCGCCGAAAGCGCGACATTGAGCTTTTCCCTGAGACGACCGAGA
CAAGCGGTCTCAACATCCGCGGGGCAGCAAGGCAGGATCAGGGAATGTCG
ATTCGTGGTGCGGCAAATGGCATCTCAATCAAAGGACGGGGCGCGTCTGT
TCGTGAACTGTTCCCTAATAAATACGGTTCCAACGCAGGCAAGGAGTTGT
TTTCCGATAAGATTGAGGGGCGAGGAGGACCACGACGCAGGGCGGAGGAC
ATGTTTAGCTGAATGGAGGTAGCTAGCGCGCAACAGCCTTCTCTTCAACT
AGACGCCTCCAACGCTGCCCCGGTTGCTGACACAATGGACGCCTCCATGG
ATATTGACATGGACATTGATCTTGGACCCCTTCCAGAAGCAGAACCAATT
GAGACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000340 | RNA 7-methylguanosine cap binding |
| GO:0003729 | mRNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR019416 |
| DBxref | PFAM:PF10309 |
| Product | Protein of unknown function (DUF2414) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2460738..2462237 - |
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