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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2515979..2516892- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40185-T1 ID=CAN33_40185-T1|Name=CAN33_40185-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=914bp|location=Sequence derived from alignment at NKJJ01000017.1:2515979..2516892- (Aspergillus niger FDAARGOS_311)
ATGCGATGGCCGCCATGGGCTTCCAACACGCAAGCCTCCAACAATGACCA
CCCTACCACCACGAACAACAATGACCCCAAGAACCTACTCGACTGGAGCG
CCTTCACCGAACTCCGCACCCTCATCCCAACTCTAGTCCTCACAACCGGC
ATCCTCAGCGCCTTCACCCTGCACCGGAACTACCTCCGCCGGTTCCCCAC
AGCAGTCAACATCACGCCCGCATATTACCGTCGCCGCAGCATCCTGGGAA
AAGTAACCAGCGTCGGTGACGGCGACAACTTTCGCATCTATCATACACCC
GGCGGAAGACTCGCGGGTTGGGGCTGGGTACCCTGGAAGAAGGTTCCCAC
GACGCGGAAGGAATTGAGAGATCAGACTGTATGTATACCTCCCCACTTTT
TTTTTTTCATCTACGTTTATGCTACCGGAGACTATATTTCTAACATCAGA
ATGAAATTAAATAGATCCATGTCCGGATAGCTGGTGTCGACGCCCCCGAA
CAAGCGCACTTCGGACGCCCCGCGCAACCCTTCGGCAAAGAAGCACACGA
GTGGCTAACGGGGTACTTGATAAACCGGCGCGTGCGGATATATGTGCATC
GACAGGACCAGTATCAGCGTGTGGTGGCGACGGTGTTTGTGCGGCGGGCG
CTGGATTTCCCGGTTCCGTTTCGCAGGCGCGATGTCGGGTATGAGATGTT
GAGGAAGGGGTTGGCAACAGTGTATGAGGCGAAGGTTGGGGCGGAGTTTG
GGGGTGAGGTGATGGAGAAGAAGTATCGGAGTGCGGAGTGGTGGGCGAAG
GCGAGGGGGTTGGGGCTGTGGAAGGGGTTCAAGAAGAATAGGGATGCGTG
GGAGAGTCCGAGGGAGTTTAAGACTAGGACGGGGATGGAAGATGTGGGGG
ATGGGAAGAAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2515979..2516892- >CAN33_40185-T1 ID=CAN33_40185-T1|Name=CAN33_40185-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1656bp|location=Sequence derived from alignment at NKJJ01000017.1:2515979..2516892- (Aspergillus niger FDAARGOS_311)
ATCCATGTCCGGATAGCTGGTGTCGACGCCCCCGAACAAGCGCACTTCGG
ACGCCCCGCGCAACCCTTCGGCAAAGAAGCACACGAGTGGCTAACGGGGT
ACTTGATAAACCGGCGCGTGCGGATATATGTGCATCGACAGGACCAGTAT
CAGCGTGTGGTGGCGACGGTGTTTGTGCGGCGGGCGCTGGATTTCCCGGT
TCCGTTTCGCAGGCGCGATGTCGGGTATGAGATGTTGAGGAAGGGGTTGG
CAACAGTGTATGAGGCGAAGGTTGGGGCGGAGTTTGGGGGTGAGGTGATG
GAGAAGAAGTATCGGAGTGCGGAGTGGTGGGCGAAGGCGAGGGGGTTGGG
GCTGTGGAAGGGGTTCAAGAAGAATAGGGATGCGTGGGAGAGTCCGAGGG
AGTTTAAGACTAGGACGGGGATGGAAGATGTGGGGGATGGGAAGAAGTAG
ATGCGATGGCCGCCATGGGCTTCCAACACGCAAGCCTCCAACAATGACCA
CCCTACCACCACGAACAACAATGACCCCAAGAACCTACTCGACTGGAGCG
CCTTCACCGAACTCCGCACCCTCATCCCAACTCTAGTCCTCACAACCGGC
ATCCTCAGCGCCTTCACCCTGCACCGGAACTACCTCCGCCGGTTCCCCAC
AGCAGTCAACATCACGCCCGCATATTACCGTCGCCGCAGCATCCTGGGAA
AAGTAACCAGCGTCGGTGACGGCGACAACTTTCGCATCTATCATACACCC
GGCGGAAGACTCGCGGGTTGGGGCTGGGTACCCTGGAAGAAGGTTCCCAC
GACGCGGAAGGAATTGAGAGATCAGACTATCCATGTCCGGATAGCTGGTG
TCGACGCCCCCGAACAAGCGCACTTCGGACGCCCCGCGCAACCCTTCGGC
AAAGAAGCACACGAGTGGCTAACGGGGTACTTGATAAACCGGCGCGTGCG
GATATATGTGCATCGACAGGACCAGTATCAGCGTGTGGTGGCGACGGTGT
TTGTGCGGCGGGCGCTGGATTTCCCGGTTCCGTTTCGCAGGCGCGATGTC
GGGTATGAGATGTTGAGGAAGGGGTTGGCAACAGTGTATGAGGCGAAGGT
TGGGGCGGAGTTTGGGGGTGAGGTGATGGAGAAGAAGTATCGGAGTGCGG
AGTGGTGGGCGAAGGCGAGGGGGTTGGGGCTGTGGAAGGGGTTCAAGAAG
AATAGGGATGCGTGGGAGAGTCCGAGGGAGTTTAAGACTAGGACGGGGAT
GGAAGATGTGGGGGATGGGAAGAAGTAGATGCGATGGCCGCCATGGGCTT
CCAACACGCAAGCCTCCAACAATGACCACCCTACCACCACGAACAACAAT
GACCCCAAGAACCTACTCGACTGGAGCGCCTTCACCGAACTCCGCACCCT
CATCCCAACTCTAGTCCTCACAACCGGCATCCTCAGCGCCTTCACCCTGC
ACCGGAACTACCTCCGCCGGTTCCCCACAGCAGTCAACATCACGCCCGCA
TATTACCGTCGCCGCAGCATCCTGGGAAAAGTAACCAGCGTCGGTGACGG
CGACAACTTTCGCATCTATCATACACCCGGCGGAAGACTCGCGGGTTGGG
GCTGGGTACCCTGGAAGAAGGTTCCCACGACGCGGAAGGAATTGAGAGAT
CAGACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG092644K0 |
| DBxref | InterPro:IPR035437 |
| DBxref | InterPro:IPR016071 |
| DBxref | PFAM:PF00565 |
| Product | putative endonuclease lcl3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2515979..2516892 - |
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