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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2540339..2541886- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40230-T1 ID=CAN33_40230-T1|Name=CAN33_40230-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1548bp|location=Sequence derived from alignment at NKJJ01000017.1:2540339..2541886- (Aspergillus niger FDAARGOS_311)
ATGTCCATTGCATCCCCATCTGAAGGCAAGGGCATGGCCCTTCTGCCCAG
GGAGATCTTCTGGCTTGTACTGAAGCATCTCGAACCCGGCGATGTCCTCC
GTTGCCGACGAGTGTGTCAGTCCTGGAACGTCGCCTTTCGAATTGGCGCC
AATCTGCTTCCAATGTTAAAGAAACGATACCCATTAGCCAGAGAGGTGCG
GCAATTAGACTCTGAAAGCGCAGAATCACTCGAAACGCCAGAATACGACG
TTCGCATATCCCAGATCTTCGATAAGGTCACGGCGAAATACGACTATCTA
AGCCGAGTAACGCCCCAAACAATGCACAGGCTTAAGCTCTGCGATGACTT
CGGAATCACAGGCGAGAGGAACTGGTTCCCCGTCCAGCCCTGGGAGTATC
ACGCCAGCCATCTCATGCAGCGCATCGATCGACCCTTCGGCGAGACCTTC
TGGTCCTACGACGACGGGCTCCTAGTGTACCCAAGTGCAGACCATTCATG
TCTCGTCCTGATGGACATGGAAACCGACAGGAAATTCATGGTCCCTTTCA
TGATCGTCGGGAGAGTAATACGCCGAGTCCGGCTTCAGAAACGAGTGCTT
GTCATCGAATGGGCAGAAAACAAAGCCTACCACTGGCTCAACGACAGCGA
CGGTGTCCACCGACACTTTGCTACCTCGTTCGACGTAAACCAGAAGGAAG
ATGGCTGGCGCGTTAATTTTCGTAACGAATGGAAAATCATGTTCCTCGGG
CATCCTCTGAGCGAGCGAGATCGGTTCTACTCCACCCATACCCAGACCCA
TTATGCCATCTACATCTGGCAACCCAACCGCAGCCTCTACACTGCAGACG
AGGACGCCCCTATTGAGTCCCTCTCTGTATGGGACATTTCCAAACCCTCC
GATTACCGACCTTCTCTAGACCCAACAGGTCGCTTGCGAGTCGAGTCCGG
AGGTGGAGAAGAAGATCTCGGACCAACCATTATCACTCGCTTCGGGTTCA
GAGAACTAGGCTTCTACGGCGTCCGTCAGCGAGGACTCCCAGCAATACAA
TCCCTCAACATCACCGACGACGATCAATCTATAGAGATCCTCGAAGGCAC
ATGCGCGGGCCGCTCACCGCAGGTTCTTGTTCCTGATGAATGGGAATCTG
AGGTGTGGGTTACGACTATCCCAATCGTTGGCGAGGGCCCGTGCCGACGA
CGGCGCGCTGACTTTCCGCTGCCACCGTATCGAGGAAATTGTAGCTTGCA
GACTAATCCTATCACCTTTGCTATCTGCGATGAGCCGTGGTATTCTATTG
TTTGTGAGTCGTATGATGAGCAGTCTCAGGTGGGTTATTGTCTTTACTTG
GAAGAACAAATATGGCCGGTCGAGACAGCTATGTTCTTGGCTGTTGGCTC
ACCTGAGTATGCACCCGAGCCGGCAAACGTCTTGCCTGAGAGCCTTGTAA
TGGAGCTCACGGCGATGGGGAAGGTTTGTGGGACAGAGGACTATCTGATA
GGTCAGAGCCACAATCGTGAGCTTGTTATTTTCAGGTTTGATAGATGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2540339..2541886- >CAN33_40230-T1 ID=CAN33_40230-T1|Name=CAN33_40230-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1548bp|location=Sequence derived from alignment at NKJJ01000017.1:2540339..2541886- (Aspergillus niger FDAARGOS_311)
ATGTCCATTGCATCCCCATCTGAAGGCAAGGGCATGGCCCTTCTGCCCAG
GGAGATCTTCTGGCTTGTACTGAAGCATCTCGAACCCGGCGATGTCCTCC
GTTGCCGACGAGTGTGTCAGTCCTGGAACGTCGCCTTTCGAATTGGCGCC
AATCTGCTTCCAATGTTAAAGAAACGATACCCATTAGCCAGAGAGGTGCG
GCAATTAGACTCTGAAAGCGCAGAATCACTCGAAACGCCAGAATACGACG
TTCGCATATCCCAGATCTTCGATAAGGTCACGGCGAAATACGACTATCTA
AGCCGAGTAACGCCCCAAACAATGCACAGGCTTAAGCTCTGCGATGACTT
CGGAATCACAGGCGAGAGGAACTGGTTCCCCGTCCAGCCCTGGGAGTATC
ACGCCAGCCATCTCATGCAGCGCATCGATCGACCCTTCGGCGAGACCTTC
TGGTCCTACGACGACGGGCTCCTAGTGTACCCAAGTGCAGACCATTCATG
TCTCGTCCTGATGGACATGGAAACCGACAGGAAATTCATGGTCCCTTTCA
TGATCGTCGGGAGAGTAATACGCCGAGTCCGGCTTCAGAAACGAGTGCTT
GTCATCGAATGGGCAGAAAACAAAGCCTACCACTGGCTCAACGACAGCGA
CGGTGTCCACCGACACTTTGCTACCTCGTTCGACGTAAACCAGAAGGAAG
ATGGCTGGCGCGTTAATTTTCGTAACGAATGGAAAATCATGTTCCTCGGG
CATCCTCTGAGCGAGCGAGATCGGTTCTACTCCACCCATACCCAGACCCA
TTATGCCATCTACATCTGGCAACCCAACCGCAGCCTCTACACTGCAGACG
AGGACGCCCCTATTGAGTCCCTCTCTGTATGGGACATTTCCAAACCCTCC
GATTACCGACCTTCTCTAGACCCAACAGGTCGCTTGCGAGTCGAGTCCGG
AGGTGGAGAAGAAGATCTCGGACCAACCATTATCACTCGCTTCGGGTTCA
GAGAACTAGGCTTCTACGGCGTCCGTCAGCGAGGACTCCCAGCAATACAA
TCCCTCAACATCACCGACGACGATCAATCTATAGAGATCCTCGAAGGCAC
ATGCGCGGGCCGCTCACCGCAGGTTCTTGTTCCTGATGAATGGGAATCTG
AGGTGTGGGTTACGACTATCCCAATCGTTGGCGAGGGCCCGTGCCGACGA
CGGCGCGCTGACTTTCCGCTGCCACCGTATCGAGGAAATTGTAGCTTGCA
GACTAATCCTATCACCTTTGCTATCTGCGATGAGCCGTGGTATTCTATTG
TTTGTGAGTCGTATGATGAGCAGTCTCAGGTGGGTTATTGTCTTTACTTG
GAAGAACAAATATGGCCGGTCGAGACAGCTATGTTCTTGGCTGTTGGCTC
ACCTGAGTATGCACCCGAGCCGGCAAACGTCTTGCCTGAGAGCCTTGTAA
TGGAGCTCACGGCGATGGGGAAGGTTTGTGGGACAGAGGACTATCTGATA
GGTCAGAGCCACAATCGTGAGCTTGTTATTTTCAGGTTTGATAGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF00646 |
| Product | F-box domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2540339..2541886 - |
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