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CAN33_40305-T1, CAN33_40305-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40305-T1
Unique NameCAN33_40305-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2605734..2606487-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40305-T1 ID=CAN33_40305-T1|Name=CAN33_40305-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=754bp|location=Sequence derived from alignment at NKJJ01000017.1:2605734..2606487- (Aspergillus niger FDAARGOS_311)
ATGTCTGACTACGGAGACCACGACGCTGAGGAAACGTAAGAGACCGGTAC
CCCATGAGAGCTTGAGCTTGCGCAGGTCAATGCTGCGCGTCTGCGTTACA
TATCGATGGCCGTCATTTTTGCTAGGTGGAAATTCCGATGTTCTGACTAG
GATTGTCTTATAGTTACGACTACGAGCCGGAGCAGGAGTACGATGACAAC
GAGCCCGAGGACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGG
AGCCGATGAATATGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACC
ACATTGTCGCTTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATG
GAACAGACACGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCC
ATACATGACCAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGC
AGATCAGGTTCGTCTCGGCAATCGATGCAGCATCAAGCATGGGCTGAGGA
GCGCAATCGGATGCTGACCATGTTTTTAGTATGAACGCCCCGGTGCTCGT
CGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGA
ACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGG
TAAGCGGACCTTCTCCATGTGTGTTTAACGATTTGACGTATTCGATCTAA
TCACTATTTCTGTGGTACAGGTACGAGGACTGGACTTGCGAAGAATTACT
CTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2605734..2606487-

>CAN33_40305-T1 ID=CAN33_40305-T1|Name=CAN33_40305-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1932bp|location=Sequence derived from alignment at NKJJ01000017.1:2605734..2606487- (Aspergillus niger FDAARGOS_311)
GTACGAGGACTGGACTTGCGAAGAATTACTCTAGTATGAACGCCCCGGTG
CTCGTCGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGA
GTTGAACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACG
GATGTTACGACTACGAGCCGGAGCAGGAGTACGATGACAACGAGCCCGAG
GACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGGAGCCGATGA
ATATGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACCACATTGTCG
CTTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATGGAACAGACA
CGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCCATACATGAC
CAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGCAGATCAGAT
GTCTGACTACGGAGACCACGACGCTGAGGAAACGTACGAGGACTGGACTT
GCGAAGAATTACTCTAGTATGAACGCCCCGGTGCTCGTCGATCTTGAGGG
CGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGAACCAGAAGAAGA
TCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGTTACGACTACGAG
CCGGAGCAGGAGTACGATGACAACGAGCCCGAGGACTTCTTAAACCCCGA
GGATGTCGACGTCGCAGAAGGAGGAGCCGATGAATATGGCGAAGGCTCAT
ACGCGCCTGCTGTCAACGGAAACCACATTGTCGCTTCAGGCGACCCGAAT
GCGGGGTATGCGGGCAAGGTCATGGAACAGACACGGGAGAAGAAGGTCCC
GAACGACCAGCGCCAGACAACTCCATACATGACCAAGTACGAGCGCGCGC
GTGTCCTGGGTACTCGGGCGCTGCAGATCAGATGTCTGACTACGGAGACC
ACGACGCTGAGGAAACGTACGAGGACTGGACTTGCGAAGAATTACTCTAG
TATGAACGCCCCGGTGCTCGTCGATCTTGAGGGCGAGACGGATCCTCTAC
AGATCGCCATCAAGGAGTTGAACCAGAAGAAGATCCCACTGATTGTGCGG
AGATATCTTCCCGACGGATGTTACGACTACGAGCCGGAGCAGGAGTACGA
TGACAACGAGCCCGAGGACTTCTTAAACCCCGAGGATGTCGACGTCGCAG
AAGGAGGAGCCGATGAATATGGCGAAGGCTCATACGCGCCTGCTGTCAAC
GGAAACCACATTGTCGCTTCAGGCGACCCGAATGCGGGGTATGCGGGCAA
GGTCATGGAACAGACACGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGA
CAACTCCATACATGACCAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGG
GCGCTGCAGATCAGATGTCTGACTACGGAGACCACGACGCTGAGGAAACG
TACGAGGACTGGACTTGCGAAGAATTACTCTAGTATGAACGCCCCGGTGC
TCGTCGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAG
TTGAACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGG
ATGTTACGACTACGAGCCGGAGCAGGAGTACGATGACAACGAGCCCGAGG
ACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGGAGCCGATGAA
TATGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACCACATTGTCGC
TTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATGGAACAGACAC
GGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCCATACATGACC
AAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGCAGATCAGATG
TCTGACTACGGAGACCACGACGCTGAGGAAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPO26CAN33_40305Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40305-T1CAN33_40305-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40305-T1.cdsCAN33_40305-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40305-T1.exon4CAN33_40305-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_40305-T1.exon3CAN33_40305-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40305-T1.exon2CAN33_40305-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40305-T1.exon1CAN33_40305-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09265552
DBxrefInterPro:IPR036161
DBxrefInterPro:IPR006111
DBxrefInterPro:IPR020708
DBxrefInterPro:IPR012293
DBxrefInterPro:IPR006110
DBxrefPFAM:PF01192
Product and III
Product II
Productsubunit common to RNA polymerases I
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2605734..2606487 -
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