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CAN33_40310-T1, CAN33_40310-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40310-T1
Unique NameCAN33_40310-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2606731..2608613+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40310-T1 ID=CAN33_40310-T1|Name=CAN33_40310-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1883bp|location=Sequence derived from alignment at NKJJ01000017.1:2606731..2608613+ (Aspergillus niger FDAARGOS_311)
ATGTCGTCGTGCAGCCATCACTTTTTCCTTCAATCTTCTTTCCTTCCTGT
CGCCAGTCCAGTGCTCATTAGTCAGGCTTGGATGGTCTGAAGGACCGCGG
AGCTATGGCTCAGAAGCGAAAAGCCTCGGGGACCTCCCCAACCCGAAGCG
GGTACAAAGCCGGACAACGCTGGACGATGTCGGTAAGATATGCCTAGAGA
CCGAGTCTAGATTCCGGCTGATACTAAATGTCTTTCATATACTCCAGACC
CAATATATGAAGAAAAGCACTCCGACCCCGAGTATGACTTTTCGGATGAC
TCCAGTGTCGCTAGCGGTAGTCTTCATGAGACTCCAGCTACTCCGATGTC
GACTATCTCCGCTAGATATCCTTCAGAGCTGAAAACTCACCGCTGCCCTT
TCGACGGTTGCACGAAGGCCTTCAACCGTCCAGCACGCTTACAGGAACAC
TTGCGCTCACACAACAATGAACGACTATTCCGTTGTACCCACGACGATTG
CGATAAGACGTTTCTCCGAGCATCGCATCTGAGCCATCACATCAAGAGCG
CCCATACCGGAATCAGAGATTACGTATGCGACCGTCCGGGATGTGGGAAG
AGCTTTGTAACTGGCTCACGGCTTCGTCGACATATAGCTGCTCATGATGG
AAGAGACAAGTACCGCTGCACAGAGTTTCCGCCTTGTGATGAGACCTTCC
GAAAACACTCAACGCTCCAAAAACACATCATGAGCGTGCATCTGAAACAG
AAACCCTTCTCTTGCCCGCACATCGACGCAACTACCGGCCAGAAATGTCC
AATGGCATTTGATACCGCAGGACACCTTCGAGCTCATGAGAGTCGCATCC
ACACCGAGAAACGATTCACCTGCACGGAGTGTACTCAGCAGGCCGAGCAG
GCCAACCCATCATCATCCGAGACTCCCGCTCTCACTACAGTAACATTCCC
GACTTACGCCCTCCTCCAAGCTCACATCCGAACTGTCCACCCCCACAATG
TCCCAATTGCAACCTGACCTGTTCCACGGCCCGAGAGCTCCGCCGTCATC
TGGAGGTCAGCCACGGTAACGTGAGTCTGGAAGAGCGAAAAGTCTTCCCC
TGCACCATACCAGGTTGCGATAGCAGCTTCACCAAAAAGGGAAACCTAAC
TGTGCACATCCGCACCGTCCACCAAGGCGAGAAGCGCTTCGTCTGCGGCG
AGACCGACCTTTCCATGTCCAAGCGAGTCGTCGGCTGGACGGGAGCCGAC
GGCTGCGGAAAACGCTACGGGAGTAAACTCGCCCTGGAGGAGCACATTCG
CACCGCGCACCTCGGCTTTCCCAACGCCAAGGCTGAGCGTCGACAGCGTC
TTGGTCTGAACAAGACACCGAACCCTCAGCAAACCGCTCCTTCCGCATTG
GCCGCTCTCACAGGTGAGGGTTATGCCGAAGAAACCGGCCGACAGATCAC
CTGCTTCATCGAAGGCTGTCCGCACCGGTTCCACCGGAATTACGATCTGT
GGGTCCATATGGGGAGTAAGCACGGATGCACCGAGGACGAGATTCGCGAT
ATGTTCATGCAGCGCGCGCTATTGGCGGACAGCAATGAGCCCGTTACCGG
CGATATGTTTGGTATCTATGGACTCGAGTTCGATAACGATGACTCCTCCG
CCCCATATGAACCGTATATCATACATGCAGATTCAAAAGCTGGTCTATAT
ACGATGGGCAGTGGTGGTGACCCCACAAATAATGAAAACAACCCCGGCGA
CTTCCCCAGCAACTTTGCTGATGCCATGATTCAAGATGTCGATGTCGATG
TTTCTTCTTCTTCTAAGATACCCAGTGCTGATGATATGGCGATGATTGAT
CCTTTGTTGGCGTATAATATGGCGGATTCATAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2606731..2608613+

>CAN33_40310-T1 ID=CAN33_40310-T1|Name=CAN33_40310-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6780bp|location=Sequence derived from alignment at NKJJ01000017.1:2606731..2608613+ (Aspergillus niger FDAARGOS_311)
ATGTCGTCGCTTGGATGGTCTGAAGGACCGCGGAGCTATGGCTCAGAAGC
GAAAAGCCTCGGGGACCTCCCCAACCCGAAGCGGGTACAAAGCCGGACAA
CGCTGGACGATGTCGACCCAATATATGAAGAAAAGCACTCCGACCCCGAG
TATGACTTTTCGGATGACTCCAGTGTCGCTAGCGGTAGTCTTCATGAGAC
TCCAGCTACTCCGATGTCGACTATCTCCGCTAGATATCCTTCAGAGCTGA
AAACTCACCGCTGCCCTTTCGACGGTTGCACGAAGGCCTTCAACCGTCCA
GCACGCTTACAGGAACACTTGCGCTCACACAACAATGAACGACTATTCCG
TTGTACCCACGACGATTGCGATAAGACGTTTCTCCGAGCATCGCATCTGA
GCCATCACATCAAGAGCGCCCATACCGGAATCAGAGATTACGTATGCGAC
CGTCCGGGATGTGGGAAGAGCTTTGTAACTGGCTCACGGCTTCGTCGACA
TATAGCTGCTCATGATGGAAGAGACAAGTACCGCTGCACAGAGTTTCCGC
CTTGTGATGAGACCTTCCGAAAACACTCAACGCTCCAAAAACACATCATG
AGCGTGCATCTGAAACAGAAACCCTTCTCTTGCCCGCACATCGACGCAAC
TACCGGCCAGAAATGTCCAATGGCATTTGATACCGCAGGACACCTTCGAG
CTCATGAGAGTCGCATCCACACCGAGAAACGATTCACCTGCACGGAGTGT
ACTCAGCAGGCCGAGCAGGCCAACCCATCATCATCCGAGACTCCCGCTCT
CACTACAGTAACATTCCCGACTTACGCCCTCCTCCAAGCTCACATCCGAA
CTGTCCACCCCCACAATGTCAGCCACGGTAACGTGAGTCTGGAAGAGCGA
AAAGTCTTCCCCTGCACCATACCAGGTTGCGATAGCAGCTTCACCAAAAA
GGGAAACCTAACTGTGCACATCCGCACCGTCCACCAAGGCGAGAAGCGCT
TCGTCTGCGGCGAGACCGACCTTTCCATGTCCAAGCGAGTCGTCGGCTGG
ACGGGAGCCGACGGCTGCGGAAAACGCTACGGGAGTAAACTCGCCCTGGA
GGAGCACATTCGCACCGCGCACCTCGGCTTTCCCAACGCCAAGGCTGAGC
GTCGACAGCGTCTTGGTCTGAACAAGACACCGAACCCTCAGCAAACCGCT
CCTTCCGCATTGGCCGCTCTCACAGGTGAGGGTTATGCCGAAGAAACCGG
CCGACAGATCACCTGCTTCATCGAAGGCTGTCCGCACCGGTTCCACCGGA
ATTACGATCTGTGGGTCCATATGGGGAGTAAGCACGGATGCACCGAGGAC
GAGATTCGCGATATGTTCATGCAGCGCGCGCTATTGGCGGACAGCAATGA
GCCCGTTACCGGCGATATGTTTGGTATCTATGGACTCGAGTTCGATAACG
ATGACTCCTCCGCCCCATATGAACCGTATATCATACATGCAGATTCAAAA
GCTGGTCTATATACGATGGGCAGTGGTGGTGACCCCACAAATAATGAAAA
CAACCCCGGCGACTTCCCCAGCAACTTTGCTGATGCCATGATTCAAGATG
TCGATGTCGATGTTTCTTCTTCTTCTAAGATACCCAGTGCTGATGATATG
GCGATGATTGATCCTTTGTTGGCGTATAATATGGCGGATTCATAGATGTC
GTCGCTTGGATGGTCTGAAGGACCGCGGAGCTATGGCTCAGAAGCGAAAA
GCCTCGGGGACCTCCCCAACCCGAAGCGGGTACAAAGCCGGACAACGCTG
GACGATGTCGACCCAATATATGAAGAAAAGCACTCCGACCCCGAGTATGA
CTTTTCGGATGACTCCAGTGTCGCTAGCGGTAGTCTTCATGAGACTCCAG
CTACTCCGATGTCGACTATCTCCGCTAGATATCCTTCAGAGCTGAAAACT
CACCGCTGCCCTTTCGACGGTTGCACGAAGGCCTTCAACCGTCCAGCACG
CTTACAGGAACACTTGCGCTCACACAACAATGAACGACTATTCCGTTGTA
CCCACGACGATTGCGATAAGACGTTTCTCCGAGCATCGCATCTGAGCCAT
CACATCAAGAGCGCCCATACCGGAATCAGAGATTACGTATGCGACCGTCC
GGGATGTGGGAAGAGCTTTGTAACTGGCTCACGGCTTCGTCGACATATAG
CTGCTCATGATGGAAGAGACAAGTACCGCTGCACAGAGTTTCCGCCTTGT
GATGAGACCTTCCGAAAACACTCAACGCTCCAAAAACACATCATGAGCGT
GCATCTGAAACAGAAACCCTTCTCTTGCCCGCACATCGACGCAACTACCG
GCCAGAAATGTCCAATGGCATTTGATACCGCAGGACACCTTCGAGCTCAT
GAGAGTCGCATCCACACCGAGAAACGATTCACCTGCACGGAGTGTACTCA
GCAGGCCGAGCAGGCCAACCCATCATCATCCGAGACTCCCGCTCTCACTA
CAGTAACATTCCCGACTTACGCCCTCCTCCAAGCTCACATCCGAACTGTC
CACCCCCACAATGTCAGCCACGGTAACGTGAGTCTGGAAGAGCGAAAAGT
CTTCCCCTGCACCATACCAGGTTGCGATAGCAGCTTCACCAAAAAGGGAA
ACCTAACTGTGCACATCCGCACCGTCCACCAAGGCGAGAAGCGCTTCGTC
TGCGGCGAGACCGACCTTTCCATGTCCAAGCGAGTCGTCGGCTGGACGGG
AGCCGACGGCTGCGGAAAACGCTACGGGAGTAAACTCGCCCTGGAGGAGC
ACATTCGCACCGCGCACCTCGGCTTTCCCAACGCCAAGGCTGAGCGTCGA
CAGCGTCTTGGTCTGAACAAGACACCGAACCCTCAGCAAACCGCTCCTTC
CGCATTGGCCGCTCTCACAGGTGAGGGTTATGCCGAAGAAACCGGCCGAC
AGATCACCTGCTTCATCGAAGGCTGTCCGCACCGGTTCCACCGGAATTAC
GATCTGTGGGTCCATATGGGGAGTAAGCACGGATGCACCGAGGACGAGAT
TCGCGATATGTTCATGCAGCGCGCGCTATTGGCGGACAGCAATGAGCCCG
TTACCGGCGATATGTTTGGTATCTATGGACTCGAGTTCGATAACGATGAC
TCCTCCGCCCCATATGAACCGTATATCATACATGCAGATTCAAAAGCTGG
TCTATATACGATGGGCAGTGGTGGTGACCCCACAAATAATGAAAACAACC
CCGGCGACTTCCCCAGCAACTTTGCTGATGCCATGATTCAAGATGTCGAT
GTCGATGTTTCTTCTTCTTCTAAGATACCCAGTGCTGATGATATGGCGAT
GATTGATCCTTTGTTGGCGTATAATATGGCGGATTCATAGATGTCGTCGC
TTGGATGGTCTGAAGGACCGCGGAGCTATGGCTCAGAAGCGAAAAGCCTC
GGGGACCTCCCCAACCCGAAGCGGGTACAAAGCCGGACAACGCTGGACGA
TGTCGACCCAATATATGAAGAAAAGCACTCCGACCCCGAGTATGACTTTT
CGGATGACTCCAGTGTCGCTAGCGGTAGTCTTCATGAGACTCCAGCTACT
CCGATGTCGACTATCTCCGCTAGATATCCTTCAGAGCTGAAAACTCACCG
CTGCCCTTTCGACGGTTGCACGAAGGCCTTCAACCGTCCAGCACGCTTAC
AGGAACACTTGCGCTCACACAACAATGAACGACTATTCCGTTGTACCCAC
GACGATTGCGATAAGACGTTTCTCCGAGCATCGCATCTGAGCCATCACAT
CAAGAGCGCCCATACCGGAATCAGAGATTACGTATGCGACCGTCCGGGAT
GTGGGAAGAGCTTTGTAACTGGCTCACGGCTTCGTCGACATATAGCTGCT
CATGATGGAAGAGACAAGTACCGCTGCACAGAGTTTCCGCCTTGTGATGA
GACCTTCCGAAAACACTCAACGCTCCAAAAACACATCATGAGCGTGCATC
TGAAACAGAAACCCTTCTCTTGCCCGCACATCGACGCAACTACCGGCCAG
AAATGTCCAATGGCATTTGATACCGCAGGACACCTTCGAGCTCATGAGAG
TCGCATCCACACCGAGAAACGATTCACCTGCACGGAGTGTACTCAGCAGG
CCGAGCAGGCCAACCCATCATCATCCGAGACTCCCGCTCTCACTACAGTA
ACATTCCCGACTTACGCCCTCCTCCAAGCTCACATCCGAACTGTCCACCC
CCACAATGTCAGCCACGGTAACGTGAGTCTGGAAGAGCGAAAAGTCTTCC
CCTGCACCATACCAGGTTGCGATAGCAGCTTCACCAAAAAGGGAAACCTA
ACTGTGCACATCCGCACCGTCCACCAAGGCGAGAAGCGCTTCGTCTGCGG
CGAGACCGACCTTTCCATGTCCAAGCGAGTCGTCGGCTGGACGGGAGCCG
ACGGCTGCGGAAAACGCTACGGGAGTAAACTCGCCCTGGAGGAGCACATT
CGCACCGCGCACCTCGGCTTTCCCAACGCCAAGGCTGAGCGTCGACAGCG
TCTTGGTCTGAACAAGACACCGAACCCTCAGCAAACCGCTCCTTCCGCAT
TGGCCGCTCTCACAGGTGAGGGTTATGCCGAAGAAACCGGCCGACAGATC
ACCTGCTTCATCGAAGGCTGTCCGCACCGGTTCCACCGGAATTACGATCT
GTGGGTCCATATGGGGAGTAAGCACGGATGCACCGAGGACGAGATTCGCG
ATATGTTCATGCAGCGCGCGCTATTGGCGGACAGCAATGAGCCCGTTACC
GGCGATATGTTTGGTATCTATGGACTCGAGTTCGATAACGATGACTCCTC
CGCCCCATATGAACCGTATATCATACATGCAGATTCAAAAGCTGGTCTAT
ATACGATGGGCAGTGGTGGTGACCCCACAAATAATGAAAACAACCCCGGC
GACTTCCCCAGCAACTTTGCTGATGCCATGATTCAAGATGTCGATGTCGA
TGTTTCTTCTTCTTCTAAGATACCCAGTGCTGATGATATGGCGATGATTG
ATCCTTTGTTGGCGTATAATATGGCGGATTCATAGATGTCGTCGCTTGGA
TGGTCTGAAGGACCGCGGAGCTATGGCTCAGAAGCGAAAAGCCTCGGGGA
CCTCCCCAACCCGAAGCGGGTACAAAGCCGGACAACGCTGGACGATGTCG
ACCCAATATATGAAGAAAAGCACTCCGACCCCGAGTATGACTTTTCGGAT
GACTCCAGTGTCGCTAGCGGTAGTCTTCATGAGACTCCAGCTACTCCGAT
GTCGACTATCTCCGCTAGATATCCTTCAGAGCTGAAAACTCACCGCTGCC
CTTTCGACGGTTGCACGAAGGCCTTCAACCGTCCAGCACGCTTACAGGAA
CACTTGCGCTCACACAACAATGAACGACTATTCCGTTGTACCCACGACGA
TTGCGATAAGACGTTTCTCCGAGCATCGCATCTGAGCCATCACATCAAGA
GCGCCCATACCGGAATCAGAGATTACGTATGCGACCGTCCGGGATGTGGG
AAGAGCTTTGTAACTGGCTCACGGCTTCGTCGACATATAGCTGCTCATGA
TGGAAGAGACAAGTACCGCTGCACAGAGTTTCCGCCTTGTGATGAGACCT
TCCGAAAACACTCAACGCTCCAAAAACACATCATGAGCGTGCATCTGAAA
CAGAAACCCTTCTCTTGCCCGCACATCGACGCAACTACCGGCCAGAAATG
TCCAATGGCATTTGATACCGCAGGACACCTTCGAGCTCATGAGAGTCGCA
TCCACACCGAGAAACGATTCACCTGCACGGAGTGTACTCAGCAGGCCGAG
CAGGCCAACCCATCATCATCCGAGACTCCCGCTCTCACTACAGTAACATT
CCCGACTTACGCCCTCCTCCAAGCTCACATCCGAACTGTCCACCCCCACA
ATGTCAGCCACGGTAACGTGAGTCTGGAAGAGCGAAAAGTCTTCCCCTGC
ACCATACCAGGTTGCGATAGCAGCTTCACCAAAAAGGGAAACCTAACTGT
GCACATCCGCACCGTCCACCAAGGCGAGAAGCGCTTCGTCTGCGGCGAGA
CCGACCTTTCCATGTCCAAGCGAGTCGTCGGCTGGACGGGAGCCGACGGC
TGCGGAAAACGCTACGGGAGTAAACTCGCCCTGGAGGAGCACATTCGCAC
CGCGCACCTCGGCTTTCCCAACGCCAAGGCTGAGCGTCGACAGCGTCTTG
GTCTGAACAAGACACCGAACCCTCAGCAAACCGCTCCTTCCGCATTGGCC
GCTCTCACAGGTGAGGGTTATGCCGAAGAAACCGGCCGACAGATCACCTG
CTTCATCGAAGGCTGTCCGCACCGGTTCCACCGGAATTACGATCTGTGGG
TCCATATGGGGAGTAAGCACGGATGCACCGAGGACGAGATTCGCGATATG
TTCATGCAGCGCGCGCTATTGGCGGACAGCAATGAGCCCGTTACCGGCGA
TATGTTTGGTATCTATGGACTCGAGTTCGATAACGATGACTCCTCCGCCC
CATATGAACCGTATATCATACATGCAGATTCAAAAGCTGGTCTATATACG
ATGGGCAGTGGTGGTGACCCCACAAATAATGAAAACAACCCCGGCGACTT
CCCCAGCAACTTTGCTGATGCCATGATTCAAGATGTCGATGTCGATGTTT
CTTCTTCTTCTAAGATACCCAGTGCTGATGATATGGCGATGATTGATCCT
TTGTTGGCGTATAATATGGCGGATTCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40310CAN33_40310Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40310-T1.exon1CAN33_40310-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_40310-T1.exon2CAN33_40310-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40310-T1.exon3CAN33_40310-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40310-T1.exon4CAN33_40310-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40310-T1.cdsCAN33_40310-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40310-T1CAN33_40310-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
ProductZinc finger C2H2 type family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2606731..2608613 +
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