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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2623914..2626068+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40330-T1 ID=CAN33_40330-T1|Name=CAN33_40330-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2155bp|location=Sequence derived from alignment at NKJJ01000017.1:2623914..2626068+ (Aspergillus niger FDAARGOS_311)
ATGGATGCTGGCTCTGCACGAAACCGTGGAAAGAAGGTTCGTGGCGATTC
TGGCCGGTCGCAGGCAGCGAACAAAGCCATGGATGCGATCCAGAAGGCCA
TCTCCAGCAACTCAGACACTCAAGCGAACATCCGACAAGGAGGACGGGGA
AGTGGTCTGGAACAGGTTATTGTTCGTGGCTGGAAACAAAGCAAGGCAGC
ATCTAACCGCGACGGCGGTCTCGAATCCCTCATCGCCTTCCTCGAGAAAA
AACTCAGCCCACCCGACTCGAAAGCTGGCACACGCGCAAGGATTACAAAG
GTATGTGCAACACCAGAACTGGCGGTCACCGACATCAATTATCAGCTTCG
TCCTCTCCGATGTGCTCTCGTTTGCAGGGGTGGTGCGTTCAGAACGACGA
TCGGCACTTTCTTAGTCTCTCCTGGCGTTTGTTCTTTTGGATGAATGGCG
CGGCTCGCAAGGTCCCTTATGCCTTACTAACGTTCATTAGTCGCGGGTTG
AAGGCGACGCTCTTATCGTCTCTATTCGGCCAGAGTTGTTGGAAAGGATG
CTTCAGCTCAATGGGTTTAGTTTTGCAGGTGCCCCTCTTACCACCGAAAA
GTATGACCCGTCTACTGGTGGGTTGCTGGACCAGCCTATGCTGTCTGCTA
TGGCACAAAATGGCGGCACATCCTCTGCTGCCGAGACCAAGGCGAAAATG
ACGACAATTCTCGGCAAGCGCTACACCCAGCAGACAAAATTACTCGATCT
TTCGAAATTGGGAACCGATCCGGATCTCTTGGCTATGGGAATCTTTGGCA
GCACATCCACCGAGTCGAAATTCTTCCCGGCACTGATGAAGGTTTGGGAG
CTGAATTTCGACAATGCCACTGCGCGTCGAGAGGCAGTGGAGAGTGTCAG
TCTCGCTCATAATCAGCTTGCCAACATCACAGCTGTGACGGCACTAGCAT
CGACAATTCCAGACCTGAAAAATCTGGATCTTTCCAACAATGAATTCAAA
GATGCGCAATCCTTGATTGGATGGCGCTGGAAATTCCGCAATCTCGAGTT
TCTCGATCTCTCAAACACTCCGTTCAGCGCCGACCCTACTTTCAAGGATA
CCATGTTGAAGTGGTATCCCAAGCTCCGGTTCCTGAACAATGTCGAAGTC
CGTACCGCAGAAGAAATAGCGGCGCAGAAGAAGACGCCGATTCCTGTGCA
ACCACCGCACTTCCAGGACGACTCTCAGATCGCAGAGAACTTTGTTAGGG
CTTTCTTCGCGGGCTACGACAACGACCGAAGCGGCATTCTCAACAGTGTC
TACGACAACCACACGACGTTCACTCTCAATGTGAATACATCGGCTCCCAG
GGCCCAACAAACAGAAACAGCGCCCTGGGATGCGTATATCAAGAAAAGCA
GAAACCTTCTCAAGATCAGCCATCTTCCTGCACGCATGTCTAGGGTATAC
ACCGGTGCGGAGAAAATCCGCGAGTTGTGGACTAGTCTTCCCGCGACTAG
ACATCCTGACATTGCGACGCGCCCGGAAGAATGGCTTATCGAGTGCTACC
CTATCCCGGGTCTTCCTGATATTTCCGGGCAGAGCTCCACGGGTGTTGGT
GGACTTCTCATCATGGTGCACGGGAAGTTCGACGAGATTAATGGGGCCAA
GGTTGAAACTCGCAGTTTCGATAGGACATTCATCATCGGGCCCGGTGGTG
GTATGGGCGGAATCAGGGTCGTCAGTGATATTCTCTGCTTGCGAGCCTAT
GGTGGACACGAGGCATGGATTCCTGAGGTTCCACCAGCCGTACCCCAAGC
TGCACCTCCAGCTGCACCAGCACCAGCACCCGCAGCCCCTGCAGCCCCTG
CGGCACTACCAGTAGCCATTCCGGGTGCTCCCGAAGGCTACGGCATGCCA
GCGCCTGGAAAAGCAGACGCACAAGTCCAGCAAGAGCAGCTAGTACTTCA
GATGAGCTCTAATACTCGAATGACCCTCCAGTACTCTGAGATGGCTTTGT
CTGGAAACGGCTGGAATATGGAGGCTGCACTGAAGAACTTTGAGGAACTT
AAGGTAAGTTCGAAGTGTATTCTCCGTCTACGATCATGCGCTAACAAGCT
TTTGCAGGCGCAGGGAACATTGCCTCCGGAGGCTTTTCTACCCGCAGCAG
TGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2623914..2626068+ >CAN33_40330-T1 ID=CAN33_40330-T1|Name=CAN33_40330-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7188bp|location=Sequence derived from alignment at NKJJ01000017.1:2623914..2626068+ (Aspergillus niger FDAARGOS_311)
ATGGATGCTGGCTCTGCACGAAACCGTGGAAAGAAGGTTCGTGGCGATTC
TGGCCGGTCGCAGGCAGCGAACAAAGCCATGGATGCGATCCAGAAGGCCA
TCTCCAGCAACTCAGACACTCAAGCGAACATCCGACAAGGAGGACGGGGA
AGTGGTCTGGAACAGGTTATTGTTCGTGGCTGGAAACAAAGCAAGGCAGC
ATCTAACCGCGACGGCGGTCTCGAATCCCTCATCGCCTTCCTCGAGAAAA
AACTCAGCCCACCCGACTCGAAAGCTGGCACACGCGCAAGGATTACAAAG
TCGCGGGTTGAAGGCGACGCTCTTATCGTCTCTATTCGGCCAGAGTTGTT
GGAAAGGATGCTTCAGCTCAATGGGTTTAGTTTTGCAGGTGCCCCTCTTA
CCACCGAAAAGTATGACCCGTCTACTGGTGGGTTGCTGGACCAGCCTATG
CTGTCTGCTATGGCACAAAATGGCGGCACATCCTCTGCTGCCGAGACCAA
GGCGAAAATGACGACAATTCTCGGCAAGCGCTACACCCAGCAGACAAAAT
TACTCGATCTTTCGAAATTGGGAACCGATCCGGATCTCTTGGCTATGGGA
ATCTTTGGCAGCACATCCACCGAGTCGAAATTCTTCCCGGCACTGATGAA
GGTTTGGGAGCTGAATTTCGACAATGCCACTGCGCGTCGAGAGGCAGTGG
AGAGTGTCAGTCTCGCTCATAATCAGCTTGCCAACATCACAGCTGTGACG
GCACTAGCATCGACAATTCCAGACCTGAAAAATCTGGATCTTTCCAACAA
TGAATTCAAAGATGCGCAATCCTTGATTGGATGGCGCTGGAAATTCCGCA
ATCTCGAGTTTCTCGATCTCTCAAACACTCCGTTCAGCGCCGACCCTACT
TTCAAGGATACCATGTTGAAGTGGTATCCCAAGCTCCGGTTCCTGAACAA
TGTCGAAGTCCGTACCGCAGAAGAAATAGCGGCGCAGAAGAAGACGCCGA
TTCCTGTGCAACCACCGCACTTCCAGGACGACTCTCAGATCGCAGAGAAC
TTTGTTAGGGCTTTCTTCGCGGGCTACGACAACGACCGAAGCGGCATTCT
CAACAGTGTCTACGACAACCACACGACGTTCACTCTCAATGTGAATACAT
CGGCTCCCAGGGCCCAACAAACAGAAACAGCGCCCTGGGATGCGTATATC
AAGAAAAGCAGAAACCTTCTCAAGATCAGCCATCTTCCTGCACGCATGTC
TAGGGTATACACCGGTGCGGAGAAAATCCGCGAGTTGTGGACTAGTCTTC
CCGCGACTAGACATCCTGACATTGCGACGCGCCCGGAAGAATGGCTTATC
GAGTGCTACCCTATCCCGGGTCTTCCTGATATTTCCGGGCAGAGCTCCAC
GGGTGTTGGTGGACTTCTCATCATGGTGCACGGGAAGTTCGACGAGATTA
ATGGGGCCAAGGTTGAAACTCGCAGTTTCGATAGGACATTCATCATCGGG
CCCGGTGGTGGTATGGGCGGAATCAGGGTCGTCAGTGATATTCTCTGCTT
GCGAGCCTATGCCATTCCGGGTGCTCCCGAAGGCTACGGCATGCCAGCGC
CTGGAAAAGCAGACGCACAAGTCCAGCAAGAGCAGCTAGTACTTCAGATG
AGCTCTAATACTCGAATGACCCTCCAGTACTCTGAGATGGCTTTGTCTGG
AAACGGCTGGAATATGGAGGCTGCACTGAAGAACTTTGAGGAACTTAAGG
CGCAGGGAACATTGCCTCCGGAGGCTTTTCTACCCGCAGCAGTGTAGATG
GATGCTGGCTCTGCACGAAACCGTGGAAAGAAGGTTCGTGGCGATTCTGG
CCGGTCGCAGGCAGCGAACAAAGCCATGGATGCGATCCAGAAGGCCATCT
CCAGCAACTCAGACACTCAAGCGAACATCCGACAAGGAGGACGGGGAAGT
GGTCTGGAACAGGTTATTGTTCGTGGCTGGAAACAAAGCAAGGCAGCATC
TAACCGCGACGGCGGTCTCGAATCCCTCATCGCCTTCCTCGAGAAAAAAC
TCAGCCCACCCGACTCGAAAGCTGGCACACGCGCAAGGATTACAAAGTCG
CGGGTTGAAGGCGACGCTCTTATCGTCTCTATTCGGCCAGAGTTGTTGGA
AAGGATGCTTCAGCTCAATGGGTTTAGTTTTGCAGGTGCCCCTCTTACCA
CCGAAAAGTATGACCCGTCTACTGGTGGGTTGCTGGACCAGCCTATGCTG
TCTGCTATGGCACAAAATGGCGGCACATCCTCTGCTGCCGAGACCAAGGC
GAAAATGACGACAATTCTCGGCAAGCGCTACACCCAGCAGACAAAATTAC
TCGATCTTTCGAAATTGGGAACCGATCCGGATCTCTTGGCTATGGGAATC
TTTGGCAGCACATCCACCGAGTCGAAATTCTTCCCGGCACTGATGAAGGT
TTGGGAGCTGAATTTCGACAATGCCACTGCGCGTCGAGAGGCAGTGGAGA
GTGTCAGTCTCGCTCATAATCAGCTTGCCAACATCACAGCTGTGACGGCA
CTAGCATCGACAATTCCAGACCTGAAAAATCTGGATCTTTCCAACAATGA
ATTCAAAGATGCGCAATCCTTGATTGGATGGCGCTGGAAATTCCGCAATC
TCGAGTTTCTCGATCTCTCAAACACTCCGTTCAGCGCCGACCCTACTTTC
AAGGATACCATGTTGAAGTGGTATCCCAAGCTCCGGTTCCTGAACAATGT
CGAAGTCCGTACCGCAGAAGAAATAGCGGCGCAGAAGAAGACGCCGATTC
CTGTGCAACCACCGCACTTCCAGGACGACTCTCAGATCGCAGAGAACTTT
GTTAGGGCTTTCTTCGCGGGCTACGACAACGACCGAAGCGGCATTCTCAA
CAGTGTCTACGACAACCACACGACGTTCACTCTCAATGTGAATACATCGG
CTCCCAGGGCCCAACAAACAGAAACAGCGCCCTGGGATGCGTATATCAAG
AAAAGCAGAAACCTTCTCAAGATCAGCCATCTTCCTGCACGCATGTCTAG
GGTATACACCGGTGCGGAGAAAATCCGCGAGTTGTGGACTAGTCTTCCCG
CGACTAGACATCCTGACATTGCGACGCGCCCGGAAGAATGGCTTATCGAG
TGCTACCCTATCCCGGGTCTTCCTGATATTTCCGGGCAGAGCTCCACGGG
TGTTGGTGGACTTCTCATCATGGTGCACGGGAAGTTCGACGAGATTAATG
GGGCCAAGGTTGAAACTCGCAGTTTCGATAGGACATTCATCATCGGGCCC
GGTGGTGGTATGGGCGGAATCAGGGTCGTCAGTGATATTCTCTGCTTGCG
AGCCTATGCCATTCCGGGTGCTCCCGAAGGCTACGGCATGCCAGCGCCTG
GAAAAGCAGACGCACAAGTCCAGCAAGAGCAGCTAGTACTTCAGATGAGC
TCTAATACTCGAATGACCCTCCAGTACTCTGAGATGGCTTTGTCTGGAAA
CGGCTGGAATATGGAGGCTGCACTGAAGAACTTTGAGGAACTTAAGGCGC
AGGGAACATTGCCTCCGGAGGCTTTTCTACCCGCAGCAGTGTAGATGGAT
GCTGGCTCTGCACGAAACCGTGGAAAGAAGGTTCGTGGCGATTCTGGCCG
GTCGCAGGCAGCGAACAAAGCCATGGATGCGATCCAGAAGGCCATCTCCA
GCAACTCAGACACTCAAGCGAACATCCGACAAGGAGGACGGGGAAGTGGT
CTGGAACAGGTTATTGTTCGTGGCTGGAAACAAAGCAAGGCAGCATCTAA
CCGCGACGGCGGTCTCGAATCCCTCATCGCCTTCCTCGAGAAAAAACTCA
GCCCACCCGACTCGAAAGCTGGCACACGCGCAAGGATTACAAAGTCGCGG
GTTGAAGGCGACGCTCTTATCGTCTCTATTCGGCCAGAGTTGTTGGAAAG
GATGCTTCAGCTCAATGGGTTTAGTTTTGCAGGTGCCCCTCTTACCACCG
AAAAGTATGACCCGTCTACTGGTGGGTTGCTGGACCAGCCTATGCTGTCT
GCTATGGCACAAAATGGCGGCACATCCTCTGCTGCCGAGACCAAGGCGAA
AATGACGACAATTCTCGGCAAGCGCTACACCCAGCAGACAAAATTACTCG
ATCTTTCGAAATTGGGAACCGATCCGGATCTCTTGGCTATGGGAATCTTT
GGCAGCACATCCACCGAGTCGAAATTCTTCCCGGCACTGATGAAGGTTTG
GGAGCTGAATTTCGACAATGCCACTGCGCGTCGAGAGGCAGTGGAGAGTG
TCAGTCTCGCTCATAATCAGCTTGCCAACATCACAGCTGTGACGGCACTA
GCATCGACAATTCCAGACCTGAAAAATCTGGATCTTTCCAACAATGAATT
CAAAGATGCGCAATCCTTGATTGGATGGCGCTGGAAATTCCGCAATCTCG
AGTTTCTCGATCTCTCAAACACTCCGTTCAGCGCCGACCCTACTTTCAAG
GATACCATGTTGAAGTGGTATCCCAAGCTCCGGTTCCTGAACAATGTCGA
AGTCCGTACCGCAGAAGAAATAGCGGCGCAGAAGAAGACGCCGATTCCTG
TGCAACCACCGCACTTCCAGGACGACTCTCAGATCGCAGAGAACTTTGTT
AGGGCTTTCTTCGCGGGCTACGACAACGACCGAAGCGGCATTCTCAACAG
TGTCTACGACAACCACACGACGTTCACTCTCAATGTGAATACATCGGCTC
CCAGGGCCCAACAAACAGAAACAGCGCCCTGGGATGCGTATATCAAGAAA
AGCAGAAACCTTCTCAAGATCAGCCATCTTCCTGCACGCATGTCTAGGGT
ATACACCGGTGCGGAGAAAATCCGCGAGTTGTGGACTAGTCTTCCCGCGA
CTAGACATCCTGACATTGCGACGCGCCCGGAAGAATGGCTTATCGAGTGC
TACCCTATCCCGGGTCTTCCTGATATTTCCGGGCAGAGCTCCACGGGTGT
TGGTGGACTTCTCATCATGGTGCACGGGAAGTTCGACGAGATTAATGGGG
CCAAGGTTGAAACTCGCAGTTTCGATAGGACATTCATCATCGGGCCCGGT
GGTGGTATGGGCGGAATCAGGGTCGTCAGTGATATTCTCTGCTTGCGAGC
CTATGCCATTCCGGGTGCTCCCGAAGGCTACGGCATGCCAGCGCCTGGAA
AAGCAGACGCACAAGTCCAGCAAGAGCAGCTAGTACTTCAGATGAGCTCT
AATACTCGAATGACCCTCCAGTACTCTGAGATGGCTTTGTCTGGAAACGG
CTGGAATATGGAGGCTGCACTGAAGAACTTTGAGGAACTTAAGGCGCAGG
GAACATTGCCTCCGGAGGCTTTTCTACCCGCAGCAGTGTAGATGGATGCT
GGCTCTGCACGAAACCGTGGAAAGAAGGTTCGTGGCGATTCTGGCCGGTC
GCAGGCAGCGAACAAAGCCATGGATGCGATCCAGAAGGCCATCTCCAGCA
ACTCAGACACTCAAGCGAACATCCGACAAGGAGGACGGGGAAGTGGTCTG
GAACAGGTTATTGTTCGTGGCTGGAAACAAAGCAAGGCAGCATCTAACCG
CGACGGCGGTCTCGAATCCCTCATCGCCTTCCTCGAGAAAAAACTCAGCC
CACCCGACTCGAAAGCTGGCACACGCGCAAGGATTACAAAGTCGCGGGTT
GAAGGCGACGCTCTTATCGTCTCTATTCGGCCAGAGTTGTTGGAAAGGAT
GCTTCAGCTCAATGGGTTTAGTTTTGCAGGTGCCCCTCTTACCACCGAAA
AGTATGACCCGTCTACTGGTGGGTTGCTGGACCAGCCTATGCTGTCTGCT
ATGGCACAAAATGGCGGCACATCCTCTGCTGCCGAGACCAAGGCGAAAAT
GACGACAATTCTCGGCAAGCGCTACACCCAGCAGACAAAATTACTCGATC
TTTCGAAATTGGGAACCGATCCGGATCTCTTGGCTATGGGAATCTTTGGC
AGCACATCCACCGAGTCGAAATTCTTCCCGGCACTGATGAAGGTTTGGGA
GCTGAATTTCGACAATGCCACTGCGCGTCGAGAGGCAGTGGAGAGTGTCA
GTCTCGCTCATAATCAGCTTGCCAACATCACAGCTGTGACGGCACTAGCA
TCGACAATTCCAGACCTGAAAAATCTGGATCTTTCCAACAATGAATTCAA
AGATGCGCAATCCTTGATTGGATGGCGCTGGAAATTCCGCAATCTCGAGT
TTCTCGATCTCTCAAACACTCCGTTCAGCGCCGACCCTACTTTCAAGGAT
ACCATGTTGAAGTGGTATCCCAAGCTCCGGTTCCTGAACAATGTCGAAGT
CCGTACCGCAGAAGAAATAGCGGCGCAGAAGAAGACGCCGATTCCTGTGC
AACCACCGCACTTCCAGGACGACTCTCAGATCGCAGAGAACTTTGTTAGG
GCTTTCTTCGCGGGCTACGACAACGACCGAAGCGGCATTCTCAACAGTGT
CTACGACAACCACACGACGTTCACTCTCAATGTGAATACATCGGCTCCCA
GGGCCCAACAAACAGAAACAGCGCCCTGGGATGCGTATATCAAGAAAAGC
AGAAACCTTCTCAAGATCAGCCATCTTCCTGCACGCATGTCTAGGGTATA
CACCGGTGCGGAGAAAATCCGCGAGTTGTGGACTAGTCTTCCCGCGACTA
GACATCCTGACATTGCGACGCGCCCGGAAGAATGGCTTATCGAGTGCTAC
CCTATCCCGGGTCTTCCTGATATTTCCGGGCAGAGCTCCACGGGTGTTGG
TGGACTTCTCATCATGGTGCACGGGAAGTTCGACGAGATTAATGGGGCCA
AGGTTGAAACTCGCAGTTTCGATAGGACATTCATCATCGGGCCCGGTGGT
GGTATGGGCGGAATCAGGGTCGTCAGTGATATTCTCTGCTTGCGAGCCTA
TGCCATTCCGGGTGCTCCCGAAGGCTACGGCATGCCAGCGCCTGGAAAAG
CAGACGCACAAGTCCAGCAAGAGCAGCTAGTACTTCAGATGAGCTCTAAT
ACTCGAATGACCCTCCAGTACTCTGAGATGGCTTTGTCTGGAAACGGCTG
GAATATGGAGGCTGCACTGAAGAACTTTGAGGAACTTAAGGCGCAGGGAA
CATTGCCTCCGGAGGCTTTTCTACCCGCAGCAGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051028 | mRNA transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263MNN |
| DBxref | InterPro:IPR009060 |
| DBxref | InterPro:IPR032710 |
| DBxref | InterPro:IPR018222 |
| DBxref | InterPro:IPR032675 |
| DBxref | InterPro:IPR002075 |
| DBxref | InterPro:IPR005637 |
| DBxref | PFAM:PF03943 |
| DBxref | PFAM:PF02136 |
| Product | TAP C-terminal domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2623914..2626068 + |
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