|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:157369..159537- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4035-T1 ID=CAN33_4035-T1|Name=CAN33_4035-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2169bp|location=Sequence derived from alignment at NKJJ01000019.1:157369..159537- (Aspergillus niger FDAARGOS_311)
ATGAGTTCCCCTGAAGCCAGCGAGATCAAGGGCAGCGTTGCCCCTGAGTC
CAACATGGAAGTACAAACCGACAAGCCAGCACAGGAGACACCGGCCTCCA
ACCAGCCTAGGAGGGAGCTTTTCATCCGATCGCTTCCCGCCTCTACGACG
ACCGAGAGCCTGACAGAATATTTCTCGCAATCCTACGTTATCAAGCATGC
CGTTGCTGTCACAGACCCTGAGACGAAGCAATCGAAGGGATACGGTTTCG
TGACATTCGCGGATATCGAAGACGCAAAGGCTGCGCTAGAAGAATTTAAT
GGCTCCGTGTTTGAAGGCAAGAAGATCAAGGTTGAATACGCGCAACCGCG
TCATCGTGTTGTTGATGAGAACCTCGGAAAGAGCAAGCCTTCGGCTGAAG
CTCTTGAGCAGAAGAAGAAGAGAGAGGAACAGAGGGCGGCTGCTCAGCCG
CCTAAGCTGATCGTTCGAAACTTGCCGTGGAGCATCAAGGAACCTGATGA
TTTGGCGGTGCTCTTCCGCAGCTTTGGAAAGGTCAAATATGTTACCCTTC
CTAAGAAGGGAAGTCAACTGGCCGGTTTCGGTTTCGTTGTTTTGCGCGGA
AAGAAAAACGCCGAGAAGGCGTTGCAGGCAGTGAACGGAAAGGAGGTGGA
CGGAAGAACATTGGCTGTCGATTGGGCTGTTGAGAAGAACGTCTGGGAGG
ATTTACAAAAGGATCAGGAGGAACAGGAGGAGAATGTAAAGGAGGAGTCA
GAAGACGCTGATATGGAGGATGCTATCGAAGCAGAAGTTGGCATTGATGA
AGAAGCCCAGTCTGACGAGGACGACGACATGGAAGATGGCAGCGACGTTG
ATGAGGATGAAGATGTCGAGGAGGACGAGGACGAGGATGAGGAAGAGGGA
GATAAGGAAGACGAAAGGAACGCTTCGACTATCTTCATCAGAAACCTCCC
CTTCACCTGTGACGATGATATGCTCTACGAACACTTCACCCAGTTCGGTC
CCCTTCGCTATGCCCGAATCGTCGTCGATCACGAAACCGAGCGTCCTCGT
GGTACTGGTTTTGCTTGCTTCTGGAAGCCCGACGATGCAGCAGCCTGCGT
GCGCGACGCCCCCAAACAACAAGATACCTTTGTCGCAGAGAAAGATAAGG
CTAAGAAAGCCTCTACCGCCTACAAGCATTCCATTCTACAGAACGAAAAC
GCCGACCCCACCGGACGGTATACCTTGGAGGGTCGTGTACTACAAGTTGC
CCGCGCAGTGAGCAAATCTCGCGCTTCACAGCTGGAGGAAGAGGGAGTGT
CTCGCCGACTCGTCCGCGATACCGACAAGCGCCGCCTGTACCTTCTTTCC
GAGGGTACCATCCCGCAGAACTCCGCGCTCTACAAGAAGCTTTCGCCATC
GGAGATCAAGATGAGAGAGGACAGCTACAAGCAACGACAGAACTTCATCA
AGAAGAACCCGGCCCTCCATCTCAGTTTGACGCGTTTGTCGATCCGTAAT
ATTCCCCGTCATGTCACCACAAAAGATCTGAAACAGCTCGCTCGTCAAGC
GATCGCCGGATTTGCAGAGGATGCGAAGAAGGGTCTGCGGCAGCCTTTGT
CTAAGGAGGAGTTGAACCGCGCGGCCGACATCATGAGAGAGGCAGAGCAG
TTGCGGAAGAAGAAGGGTGTTGGTGTTGTGAGACAAGCGAAGATCGTCTT
CGAAACCCGTGACGGCCACAAGGTTGGCGAGGACAAGGCTGCGGGAAGAA
GCAGAGGTTACGGTTTCATTGAATACTACACCCACCGCCACGCCCTGATG
GCTCTCAGATGGCTCAATGGCCATGCTGTTGAGGCACCTGCGACTGGTTC
GGAGGACGCCAAGGACAAGAAGAAGCGTTTGATCGTTGAGTTCGCCATTG
AGAACGCCCAGGTCGTCAAGCGCCGACAAGAACAGCAGGCTAAGGCCCGT
ACTTTCAAGAAAGGAAAGCAGGATGGTGAACGTTCTGCGGAGAAGGACGA
AGCAAAGAACAACAAGGGAGGTCCCAATGGAAAGAAGAGGAAGCGCTCTG
ACAACAACGACAAGGGCGCAAATGGAGAGGATGATGAGGAACAGAATAAG
CTTGCAAAGCGGAATCGTATCATCGCAAAGAAGCGCATGCAGCGAAGATC
TCGGAAAGGAAAGGCCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:157369..159537- >CAN33_4035-T1 ID=CAN33_4035-T1|Name=CAN33_4035-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4074bp|location=Sequence derived from alignment at NKJJ01000019.1:157369..159537- (Aspergillus niger FDAARGOS_311)
AAACCTCCCCTTCACCTGTGACGATGATATGCTCTACGAACACTTCACCC
AGTTCGGTCCCCTTCGCTATGCCCGAATCGTCGTCGATCACGAAACCGAG
CGTCCTCGTGGTACTGGTTTTGCTTGCTTCTGGAAGCCCGACGATGCAGC
AGCCTGCGTGCGCGACGCCCCCAAACAACAAGATACCTTTGTCGCAGAGA
AAGATAAGGCTAAGAAAGCCTCTACCGCCTACAAGCATTCCATTCTACAG
AACGAAAACGCCGACCCCACCGGACGGTATACCTTGGAGGGTCGTGTACT
ACAAGTTGCCCGCGCAGTGAGCAAATCTCGCGCTTCACAGCTGGAGGAAG
AGGGAGTGTCTCGCCGACTCGTCCGCGATACCGACAAGCGCCGCCTGTAC
CTTCTTTCCGAGGGTACCATCCCGCAGAACTCCGCGCTCTACAAGAAGCT
TTCGCCATCGGAGATCAAGATGAGAGAGGACAGCTACAAGCAACGACAGA
ACTTCATCAAGAAGAACCCGGCCCTCCATCTCAGTTTGACGCGTTTGTCG
ATCCGTAATATTCCCCGTCATGTCACCACAAAAGATCTGAAACAGCTCGC
TCGTCAAGCGATCGCCGGATTTGCAGAGGATGCGAAGAAGGGTCTGCGGC
AGCCTTTGTCTAAGGAGGAGTTGAACCGCGCGGCCGACATCATGAGAGAG
GCAGAGCAGTTGCGGAAGAAGAAGGGTGTTGGTGTTGTGAGACAAGCGAA
GATCGTCTTCGAAACCCGTGACGGCCACAAGGTTGGCGAGGACAAGGCTG
CGGGAAGAAGCAGAGGTTACGGTTTCATTGAATACTACACCCACCGCCAC
GCCCTGATGGCTCTCAGATGGCTCAATGGCCATGCTGTTGAGGCACCTGC
GACTGGTTCGGAGGACGCCAAGGACAAGAAGAAGCGTTTGATCGTTGAGT
TCGCCATTGAGAACGCCCAGGTCGTCAAGCGCCGACAAGAACAGCAGGCT
AAGGCCCGTACTTTCAAGAAAGGAAAGCAGGATGGTGAACGTTCTGCGGA
GAAGGACGAAGCAAAGAACAACAAGGGAGGTCCCAATGGAAAGAAGAGGA
AGCGCTCTGACAACAACGACAAGGGCGCAAATGGAGAGGATGATGAGGAA
CAGAATAAGCTTGCAAAGCGGAATCGTATCATCGCAAAGAAGCGCATGCA
GCGAAGATCTCGGAAAGGAAAGGCCTAAATGAGTTCCCCTGAAGCCAGCG
AGATCAAGGGCAGCGTTGCCCCTGAGTCCAACATGGAAGTACAAACCGAC
AAGCCAGCACAGGAGACACCGGCCTCCAACCAGCCTAGGAGGGAGCTTTT
CATCCGATCGCTTCCCGCCTCTACGACGACCGAGAGCCTGACAGAATATT
TCTCGCAATCCTACGTTATCAAGCATGCCGTTGCTGTCACAGACCCTGAG
ACGAAGCAATCGAAGGGATACGGTTTCGTGACATTCGCGGATATCGAAGA
CGCAAAGGCTGCGCTAGAAGAATTTAATGGCTCCGTGTTTGAAGGCAAGA
AGATCAAGGTTGAATACGCGCAACCGCGTCATCGTGTTGTTGATGAGAAC
CTCGGAAAGAGCAAGCCTTCGGCTGAAGCTCTTGAGCAGAAGAAGAAGAG
AGAGGAACAGAGGGCGGCTGCTCAGCCGCCTAAGCTGATCGTTCGAAACT
TGCCGTGGAGCATCAAGGAACCTGATGATTTGGCGGTGCTCTTCCGCAGC
TTTGGAAAGGTCAAATATGTTACCCTTCCTAAGAAGGGAAGTCAACTGGC
CGGTTTCGGTTTCGTTGTTTTGCGCGGAAAGAAAAACGCCGAGAAGGCGT
TGCAGGCAGTGAACGGAAAGGAGGTGGACGGAAGAACATTGGCTGTCGAT
TGGGCTGTTGAGAAGAACGTCTGGGAGGATTTACAAAAGGATCAGGAGGA
ACAGGAGGAGAATGTAAAGGAGGAGTCAGAAGACGCTGATATGGAGGATG
CTATCGAAGCAGAAGTTGGCATTGATGAAGAAGCCCAAAACCTCCCCTTC
ACCTGTGACGATGATATGCTCTACGAACACTTCACCCAGTTCGGTCCCCT
TCGCTATGCCCGAATCGTCGTCGATCACGAAACCGAGCGTCCTCGTGGTA
CTGGTTTTGCTTGCTTCTGGAAGCCCGACGATGCAGCAGCCTGCGTGCGC
GACGCCCCCAAACAACAAGATACCTTTGTCGCAGAGAAAGATAAGGCTAA
GAAAGCCTCTACCGCCTACAAGCATTCCATTCTACAGAACGAAAACGCCG
ACCCCACCGGACGGTATACCTTGGAGGGTCGTGTACTACAAGTTGCCCGC
GCAGTGAGCAAATCTCGCGCTTCACAGCTGGAGGAAGAGGGAGTGTCTCG
CCGACTCGTCCGCGATACCGACAAGCGCCGCCTGTACCTTCTTTCCGAGG
GTACCATCCCGCAGAACTCCGCGCTCTACAAGAAGCTTTCGCCATCGGAG
ATCAAGATGAGAGAGGACAGCTACAAGCAACGACAGAACTTCATCAAGAA
GAACCCGGCCCTCCATCTCAGTTTGACGCGTTTGTCGATCCGTAATATTC
CCCGTCATGTCACCACAAAAGATCTGAAACAGCTCGCTCGTCAAGCGATC
GCCGGATTTGCAGAGGATGCGAAGAAGGGTCTGCGGCAGCCTTTGTCTAA
GGAGGAGTTGAACCGCGCGGCCGACATCATGAGAGAGGCAGAGCAGTTGC
GGAAGAAGAAGGGTGTTGGTGTTGTGAGACAAGCGAAGATCGTCTTCGAA
ACCCGTGACGGCCACAAGGTTGGCGAGGACAAGGCTGCGGGAAGAAGCAG
AGGTTACGGTTTCATTGAATACTACACCCACCGCCACGCCCTGATGGCTC
TCAGATGGCTCAATGGCCATGCTGTTGAGGCACCTGCGACTGGTTCGGAG
GACGCCAAGGACAAGAAGAAGCGTTTGATCGTTGAGTTCGCCATTGAGAA
CGCCCAGGTCGTCAAGCGCCGACAAGAACAGCAGGCTAAGGCCCGTACTT
TCAAGAAAGGAAAGCAGGATGGTGAACGTTCTGCGGAGAAGGACGAAGCA
AAGAACAACAAGGGAGGTCCCAATGGAAAGAAGAGGAAGCGCTCTGACAA
CAACGACAAGGGCGCAAATGGAGAGGATGATGAGGAACAGAATAAGCTTG
CAAAGCGGAATCGTATCATCGCAAAGAAGCGCATGCAGCGAAGATCTCGG
AAAGGAAAGGCCTAAATGAGTTCCCCTGAAGCCAGCGAGATCAAGGGCAG
CGTTGCCCCTGAGTCCAACATGGAAGTACAAACCGACAAGCCAGCACAGG
AGACACCGGCCTCCAACCAGCCTAGGAGGGAGCTTTTCATCCGATCGCTT
CCCGCCTCTACGACGACCGAGAGCCTGACAGAATATTTCTCGCAATCCTA
CGTTATCAAGCATGCCGTTGCTGTCACAGACCCTGAGACGAAGCAATCGA
AGGGATACGGTTTCGTGACATTCGCGGATATCGAAGACGCAAAGGCTGCG
CTAGAAGAATTTAATGGCTCCGTGTTTGAAGGCAAGAAGATCAAGGTTGA
ATACGCGCAACCGCGTCATCGTGTTGTTGATGAGAACCTCGGAAAGAGCA
AGCCTTCGGCTGAAGCTCTTGAGCAGAAGAAGAAGAGAGAGGAACAGAGG
GCGGCTGCTCAGCCGCCTAAGCTGATCGTTCGAAACTTGCCGTGGAGCAT
CAAGGAACCTGATGATTTGGCGGTGCTCTTCCGCAGCTTTGGAAAGGTCA
AATATGTTACCCTTCCTAAGAAGGGAAGTCAACTGGCCGGTTTCGGTTTC
GTTGTTTTGCGCGGAAAGAAAAACGCCGAGAAGGCGTTGCAGGCAGTGAA
CGGAAAGGAGGTGGACGGAAGAACATTGGCTGTCGATTGGGCTGTTGAGA
AGAACGTCTGGGAGGATTTACAAAAGGATCAGGAGGAACAGGAGGAGAAT
GTAAAGGAGGAGTCAGAAGACGCTGATATGGAGGATGCTATCGAAGCAGA
AGTTGGCATTGATGAAGAAGCCCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260XQV |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | RNA recognition motif family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:157369..159537 - |
|
