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CAN33_40355-T1, CAN33_40355-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40355-T1
Unique NameCAN33_40355-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2637357..2638416-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40355-T1 ID=CAN33_40355-T1|Name=CAN33_40355-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1060bp|location=Sequence derived from alignment at NKJJ01000017.1:2637357..2638416- (Aspergillus niger FDAARGOS_311)
ATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGC
CCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCA
GCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTC
GTCCTGATGGGTAAGAACACCATGGTATGATGATCCTCTGAAACCACCGG
TGCCCGTTCCGCATGCTGATGAGTTGTCCAGGTTCGCCGTGCCATCAAGG
GCTTCGTCAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAG
GGTAAGTGAAGTTGCTTCCAGAGTCTGCGGCGATGTCAATTGGCTAACAT
TTGCCTTCCGCACAGGTAACGTTGGTTTCATCTTCACCAACGGTGACCTC
AAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTCCCGCTCG
TGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGTAACACCG
GTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGTCCCCACC
AAGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAAGCTCGTTGA
GGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAACATGCTGA
ACATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTACGACCAG
GGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTCAGCTCCT
CGAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCTCCCTGGCTG
TCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAACAGCTAC
AAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGCCCGAGAT
TGAGGAGCTCAAGGACCGTATTGCCAACCCTGACGCTTACGCCTCCGCTG
CTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGTGGTGCTCCCGCCGCTGAG
GCTCCCAAGGAGGAAGAGGAGGAGTCCGATGAGGACATGGGCTTCGGCCT
CTTCGACTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2637357..2638416-

>CAN33_40355-T1 ID=CAN33_40355-T1|Name=CAN33_40355-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3360bp|location=Sequence derived from alignment at NKJJ01000017.1:2637357..2638416- (Aspergillus niger FDAARGOS_311)
AGGAGGAGTCCGATGAGGACATGGGCTTCGGCCTCTTCGACTAAGTAACG
TTGGTTTCATCTTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATC
CTGGCCAACCGTGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGG
CGATGTCTGGGTCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCT
CTTTCTTCCAGGCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATT
GAAATTACCACCGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCC
CTCCGAGGCCACCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATG
GTATGACCATCCAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCT
GTCCTGGACATTGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCAT
TAACACCATCACCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCG
CTGTCATGCACTCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCT
GTTGAGACCGAGTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTTC
GCCGTGCCATCAAGGGCTTCGTCAACGACAACCCCGAGTACGAGCGTCTG
CTCCCCTTCGTTAAGGATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACT
TCGAGAAGCTCAAGGCCCTTCTCGATGAGTACAAGACGGTCTTCATTGTC
GGTGTCGACAATGTCAGCTCTCAGCAGATGCACGAGATTCGTCTGAGTCT
CCGTGGCGAGGGTGTCGTCCTGATGGGTAAGAACACCATGAGGAGGAGTC
CGATGAGGACATGGGCTTCGGCCTCTTCGACTAAGTAACGTTGGTTTCAT
CTTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACC
GTGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGG
GTCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCA
GGCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCA
CCGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCC
ACCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATGGTATGACCAT
CCAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACA
TTGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATC
ACCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCA
CTCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCG
AGTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTTCGCCGTGCCAT
CAAGGGCTTCGTCAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCG
TTAAGGATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCT
CAAGGCCCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACA
ATGTCAGCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAG
GGTGTCGTCCTGATGGGTAAGAACACCATGAGGAGGAGTCCGATGAGGAC
ATGGGCTTCGGCCTCTTCGACTAAGTAACGTTGGTTTCATCTTCACCAAC
GGTGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGC
TCCCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCG
GTAACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGT
GTCCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAA
GCTCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCA
ACATGCTGAACATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTC
TACGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTC
TCAGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCT
CCCTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTC
AACAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTG
GCCCGAGATTGAGGAGCTCAAGGACCGTTCGCCGTGCCATCAAGGGCTTC
GTCAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGATGG
GGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGCCCTT
CTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCAGCTC
TCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCC
TGATGGGTAAGAACACCATGAGGAGGAGTCCGATGAGGACATGGGCTTCG
GCCTCTTCGACTAAGTAACGTTGGTTTCATCTTCACCAACGGTGACCTCA
AGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTCCCGCTCGT
GCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGTAACACCGG
TATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGTCCCCACCA
AGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAAGCTCGTTGAG
GCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAACATGCTGAA
CATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTACGACCAGG
GTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTCAGCTCCTC
GAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCTCCCTGGCTGT
CAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAACAGCTACA
AGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGCCCGAGATT
GAGGAGCTCAAGGACCGTTCGCCGTGCCATCAAGGGCTTCGTCAACGACA
ACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGATGGGGGGCAAGTC
TGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCTCGATGAGT
ACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCAGCTCTCAGCAGATG
CACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTGATGGGTAA
GAACACCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
60SCAN33_40355Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40355-T1CAN33_40355-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40355-T1.cdsCAN33_40355-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40355-T1.exon4CAN33_40355-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_40355-T1.exon3CAN33_40355-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40355-T1.exon2CAN33_40355-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40355-T1.exon1CAN33_40355-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264G1I
DBxrefInterPro:IPR030670
DBxrefInterPro:IPR040637
DBxrefInterPro:IPR001790
DBxrefPFAM:PF17777
DBxrefPFAM:PF00466
Product60s acidic ribosomal protein P2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2637357..2638416 -
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