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CAN33_40375-T1, CAN33_40375-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40375-T1
Unique NameCAN33_40375-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2650574..2651084-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40375-T1 ID=CAN33_40375-T1|Name=CAN33_40375-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=511bp|location=Sequence derived from alignment at NKJJ01000017.1:2650574..2651084- (Aspergillus niger FDAARGOS_311)
ATGCCACCCACGAAACAAGAACTCTCTCTCCTCATCAACCCCCTCGTCCC
GGAATCTCTCCAACACAACAACAGGGTGCGTTAAACCCTCCCCCAAACCA
ACCAACCTCCTACGAACCCTCTCACTAACAATACCACCTAATCTAATCCC
ACAGACATTATCTTCATTACACTCACTAACCTCCTTCCTCCTCGGCCTCA
CAGCCGGAATCCTCTCCCTGCAATCCGCCACCGGATTCCTCTTCTACCTC
CTCGGCACGGTCTTCGTGTCCGCGCTGTTCCACGCCCTGCTACTCTATCG
CTCCGGGGGATTAGGCGCGGGGATGTATTTTGCTGGTGCGAATGGGGAAG
TTGAGGGGATGGATGAGAGGGGTGTAGTCAGTGGTAAGGGTACTAAGGGA
GGTGGTATGTTGAGACGCGCGGCCTGGAGGGATGTTTGGTTTGGGGGTGG
TGTGCTGAGTGAGGCGCTGAGTGGGTTTATCTTGGGGTGGGCGGGTGTTG
GGGGGTTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2650574..2651084-

>CAN33_40375-T1 ID=CAN33_40375-T1|Name=CAN33_40375-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=864bp|location=Sequence derived from alignment at NKJJ01000017.1:2650574..2651084- (Aspergillus niger FDAARGOS_311)
ACATTATCTTCATTACACTCACTAACCTCCTTCCTCCTCGGCCTCACAGC
CGGAATCCTCTCCCTGCAATCCGCCACCGGATTCCTCTTCTACCTCCTCG
GCACGGTCTTCGTGTCCGCGCTGTTCCACGCCCTGCTACTCTATCGCTCC
GGGGGATTAGGCGCGGGGATGTATTTTGCTGGTGCGAATGGGGAAGTTGA
GGGGATGGATGAGAGGGGTGTAGTCAGTGGTAAGGGTACTAAGGGAGGTG
GTATGTTGAGACGCGCGGCCTGGAGGGATGTTTGGTTTGGGGGTGGTGTG
CTGAGTGAGGCGCTGAGTGGGTTTATCTTGGGGTGGGCGGGTGTTGGGGG
GTTTTGAATGCCACCCACGAAACAAGAACTCTCTCTCCTCATCAACCCCC
TCGTCCCGGAATCTCTCCAACACAACAACAGGACATTATCTTCATTACAC
TCACTAACCTCCTTCCTCCTCGGCCTCACAGCCGGAATCCTCTCCCTGCA
ATCCGCCACCGGATTCCTCTTCTACCTCCTCGGCACGGTCTTCGTGTCCG
CGCTGTTCCACGCCCTGCTACTCTATCGCTCCGGGGGATTAGGCGCGGGG
ATGTATTTTGCTGGTGCGAATGGGGAAGTTGAGGGGATGGATGAGAGGGG
TGTAGTCAGTGGTAAGGGTACTAAGGGAGGTGGTATGTTGAGACGCGCGG
CCTGGAGGGATGTTTGGTTTGGGGGTGGTGTGCTGAGTGAGGCGCTGAGT
GGGTTTATCTTGGGGTGGGCGGGTGTTGGGGGGTTTTGAATGCCACCCAC
GAAACAAGAACTCTCTCTCCTCATCAACCCCCTCGTCCCGGAATCTCTCC
AACACAACAACAGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40375CAN33_40375Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40375-T1CAN33_40375-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40375-T1.cdsCAN33_40375-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40375-T1.exon2CAN33_40375-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40375-T1.exon1CAN33_40375-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029008
DBxrefPFAM:PF07019
ProductRab5-interacting protein (Rab5ip) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2650574..2651084 -
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