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CAN33_40380-T1, CAN33_40380-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40380-T1
Unique NameCAN33_40380-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2651675..2653626-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40380-T1 ID=CAN33_40380-T1|Name=CAN33_40380-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1952bp|location=Sequence derived from alignment at NKJJ01000017.1:2651675..2653626- (Aspergillus niger FDAARGOS_311)
ATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAA
GTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGC
TTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGC
AGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTC
GAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGG
ATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTG
GACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGT
TCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGA
CCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCC
AAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAA
GGGTAAGTTGCATTTCAAACCAGGCAAGCGTGACAGGTATTAACAATAAT
ATTTTGCCAGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTT
GAACGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCG
GTGCTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTC
CCTGATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCA
AACGGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGA
CTTCCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACC
TTGGGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCA
ACCCCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCC
AATTCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACC
GCCACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAA
TGTTGGAAATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGA
CCTTTGGCCAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATG
GTGGCCAACGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAA
CCGCATTGCACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACG
ATGGCCAGGGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGC
CTGGCCAGCCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCT
GTTGAACACTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGA
TGGCGGGTCGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGT
GCTGGCGGACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTT
CTTGGCAGCATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTG
CACTTGGTATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCA
GACCACTCGGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAG
CTCGAAGCCGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTC
CCAGCTGGCTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAG
GACTTGAAATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGA
CCGCGGCGTCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGGTGAGTT
ACATAAACTCTCCAAGGTGTTTAGACATCATGCTAATCTTTGTAGGTTTT
TGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGT
GA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2651675..2653626-

>CAN33_40380-T1 ID=CAN33_40380-T1|Name=CAN33_40380-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7008bp|location=Sequence derived from alignment at NKJJ01000017.1:2651675..2653626- (Aspergillus niger FDAARGOS_311)
GTTTTTGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACAT
TGCGTGAGCCGATATGGTGGCCAACGCGACTGCGATGAAGCTGGCCGCAC
TGTCGACCGTCAACAACCGCATTGCACTTGATGATGCTCGCAAGTACCGT
CGGGCTCGCTCCAACGATGGCCAGGGTAAGAACTCGGCCAACAGCCACGC
CATGTCTCAGGGTGGCCTGGCCAGCCCGGGCCTCCCGGGCCACAGTCACC
TTGTTGCCGGACAGCTGTTGAACACTCAGCAGCTGGCGGCTTTGCAGGCA
CAGCAACAGGCTGCGATGGCGGGTCGTCGCTCCCGCCCGACGTCGCCTGG
AATCGCCATGCAGGGTGCTGGCGGACTTGGTCCGATGGGCTTCACTTCGC
CGCAGAACAACGGCTTCTTGGCAGCATATGACCCGAACAACCCGCTCATG
GGTAACGGCCTGGGTGCACTTGGTATCGGGCAGTTTGGCCTGGGAGGTCC
TGAGGGCTACCTCTCAGACCACTCGGAAGTGGCTCGCGGCCGGTCCCCGC
GTGGTCGTCGCGGTAGCTCGAAGCCGCCGGAGGACCCCACGGACCCTAAC
CTCTTGAAGGACATTCCCAGCTGGCTGAGATCGCTGCGGCTGCACAAGTA
CACGGAAAACCTGAAGGACTTGAAATGGACGGAGCTGGTCGAATTGAACG
ACAAGGCGCTGGAAGACCGCGGCGTCAATGCTCTTGGTGCCAGAAACAAA
ATGCTCAAGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTTG
AACGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGG
TGCTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTCC
CTGATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAA
ACGGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGAC
TTCCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACCT
TGGGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAA
CCCCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCA
ATTCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCG
CCACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAAT
ATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAA
GTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGC
TTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGC
AGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTC
GAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGG
ATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTG
GACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGT
TCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGA
CCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCC
AAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAA
GGGTTTTTGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAAC
ATTGCGTGAGCCGATATGGTGGCCAACGCGACTGCGATGAAGCTGGCCGC
ACTGTCGACCGTCAACAACCGCATTGCACTTGATGATGCTCGCAAGTACC
GTCGGGCTCGCTCCAACGATGGCCAGGGTAAGAACTCGGCCAACAGCCAC
GCCATGTCTCAGGGTGGCCTGGCCAGCCCGGGCCTCCCGGGCCACAGTCA
CCTTGTTGCCGGACAGCTGTTGAACACTCAGCAGCTGGCGGCTTTGCAGG
CACAGCAACAGGCTGCGATGGCGGGTCGTCGCTCCCGCCCGACGTCGCCT
GGAATCGCCATGCAGGGTGCTGGCGGACTTGGTCCGATGGGCTTCACTTC
GCCGCAGAACAACGGCTTCTTGGCAGCATATGACCCGAACAACCCGCTCA
TGGGTAACGGCCTGGGTGCACTTGGTATCGGGCAGTTTGGCCTGGGAGGT
CCTGAGGGCTACCTCTCAGACCACTCGGAAGTGGCTCGCGGCCGGTCCCC
GCGTGGTCGTCGCGGTAGCTCGAAGCCGCCGGAGGACCCCACGGACCCTA
ACCTCTTGAAGGACATTCCCAGCTGGCTGAGATCGCTGCGGCTGCACAAG
TACACGGAAAACCTGAAGGACTTGAAATGGACGGAGCTGGTCGAATTGAA
CGACAAGGCGCTGGAAGACCGCGGCGTCAATGCTCTTGGTGCCAGAAACA
AAATGCTCAAGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGT
TGAACGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCC
GGTGCTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTT
CCCTGATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGC
AAACGGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGG
ACTTCCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACAC
CTTGGGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGC
AACCCCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGC
CAATTCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAAC
CGCCACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACA
ATATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCC
AAGTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCA
GCTTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCC
GCAGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCG
TCGAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGC
GGATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGC
TGGACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGG
GTTCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCA
GACCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGG
CCAAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAG
AAGGGTTTTTGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACA
ACATTGCGTGAGCCGATATGGTGGCCAACGCGACTGCGATGAAGCTGGCC
GCACTGTCGACCGTCAACAACCGCATTGCACTTGATGATGCTCGCAAGTA
CCGTCGGGCTCGCTCCAACGATGGCCAGGGTAAGAACTCGGCCAACAGCC
ACGCCATGTCTCAGGGTGGCCTGGCCAGCCCGGGCCTCCCGGGCCACAGT
CACCTTGTTGCCGGACAGCTGTTGAACACTCAGCAGCTGGCGGCTTTGCA
GGCACAGCAACAGGCTGCGATGGCGGGTCGTCGCTCCCGCCCGACGTCGC
CTGGAATCGCCATGCAGGGTGCTGGCGGACTTGGTCCGATGGGCTTCACT
TCGCCGCAGAACAACGGCTTCTTGGCAGCATATGACCCGAACAACCCGCT
CATGGGTAACGGCCTGGGTGCACTTGGTATCGGGCAGTTTGGCCTGGGAG
GTCCTGAGGGCTACCTCTCAGACCACTCGGAAGTGGCTCGCGGCCGGTCC
CCGCGTGGTCGTCGCGGTAGCTCGAAGCCGCCGGAGGACCCCACGGACCC
TAACCTCTTGAAGGACATTCCCAGCTGGCTGAGATCGCTGCGGCTGCACA
AGTACACGGAAAACCTGAAGGACTTGAAATGGACGGAGCTGGTCGAATTG
AACGACAAGGCGCTGGAAGACCGCGGCGTCAATGCTCTTGGTGCCAGAAA
CAAAATGCTCAAGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAA
GTTGAACGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCC
CCGGTGCTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATG
TTCCCTGATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCA
GCAAACGGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATC
GGACTTCCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGAC
ACCTTGGGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCC
GCAACCCCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGG
GCCAATTCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAA
ACCGCCACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTA
CAATATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCT
CCAAGTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCAC
CAGCTTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATC
CCGCAGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGG
CGTCGAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTC
GCGGATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCAC
GCTGGACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCC
GGGTTCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAG
CAGACCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGAT
GGCCAAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCG
AGAAGGGTTTTTGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGA
CAACATTGCGTGAGCCGATATGGTGGCCAACGCGACTGCGATGAAGCTGG
CCGCACTGTCGACCGTCAACAACCGCATTGCACTTGATGATGCTCGCAAG
TACCGTCGGGCTCGCTCCAACGATGGCCAGGGTAAGAACTCGGCCAACAG
CCACGCCATGTCTCAGGGTGGCCTGGCCAGCCCGGGCCTCCCGGGCCACA
GTCACCTTGTTGCCGGACAGCTGTTGAACACTCAGCAGCTGGCGGCTTTG
CAGGCACAGCAACAGGCTGCGATGGCGGGTCGTCGCTCCCGCCCGACGTC
GCCTGGAATCGCCATGCAGGGTGCTGGCGGACTTGGTCCGATGGGCTTCA
CTTCGCCGCAGAACAACGGCTTCTTGGCAGCATATGACCCGAACAACCCG
CTCATGGGTAACGGCCTGGGTGCACTTGGTATCGGGCAGTTTGGCCTGGG
AGGTCCTGAGGGCTACCTCTCAGACCACTCGGAAGTGGCTCGCGGCCGGT
CCCCGCGTGGTCGTCGCGGTAGCTCGAAGCCGCCGGAGGACCCCACGGAC
CCTAACCTCTTGAAGGACATTCCCAGCTGGCTGAGATCGCTGCGGCTGCA
CAAGTACACGGAAAACCTGAAGGACTTGAAATGGACGGAGCTGGTCGAAT
TGAACGACAAGGCGCTGGAAGACCGCGGCGTCAATGCTCTTGGTGCCAGA
AACAAAATGCTCAAGATGCCATGTCTAACCGCTTGAACGATGCCATGTCC
AAGTTGAACGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTC
CCCCGGTGCTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCA
TGTTCCCTGATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACC
CAGCAAACGGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGA
TCGGACTTCCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACG
ACACCTTGGGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAG
CCGCAACCCCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCAT
GGGCCAATTCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCC
AAACCGCCACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCG
TACAATATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGC
CTCCAAGTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGC
ACCAGCTTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCA
TCCCGCAGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCA
GGCGTCGAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGC
TCGCGGATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCC
ACGCTGGACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTT
CCGGGTTCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGC
AGCAGACCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAG
ATGGCCAAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGG
CGAGAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0043488regulation of mRNA stability
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VTS1CAN33_40380Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40380-T1CAN33_40380-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40380-T1.cdsCAN33_40380-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40380-T1.exon4CAN33_40380-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_40380-T1.exon3CAN33_40380-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40380-T1.exon2CAN33_40380-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40380-T1.exon1CAN33_40380-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR037635
DBxrefInterPro:IPR013761
DBxrefInterPro:IPR001660
DBxrefPFAM:PF07647
ProductFlap-structured DNA-binding and RNA-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2651675..2653626 -
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