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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:160230..161213+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4040-T1 ID=CAN33_4040-T1|Name=CAN33_4040-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=984bp|location=Sequence derived from alignment at NKJJ01000019.1:160230..161213+ (Aspergillus niger FDAARGOS_311)
ATGGACCCAGTAGCACGTTCAGAATCTGCTACGCCCCGAGCGTCTGGTGC
CTCGACGCCGCAGCCACCGTCTAAAGTCCAGCAGCCTAAGCCACAAGCAC
TCCCCAGCAGGTCTGGTCCATCTGCCATCCTCGTGTCAACGCGACAAAAA
GGCAATCCGATATTGAATCATATCAAACTACTGCCATGGGAATATGCAGA
TATTCCGGCCGACTATGTGGTCGGAAACACCACCTGTGCTCTATTTCTTT
CCTTGAAGTACCACCGGTTACATCCCGAATATATCTACTCGCGAATTCGT
CTCATAGCAGGAAAATACCTTTTACGTATTATCCTGGTTATTGTGGATAT
CCCGAATCATGAAGAAAGCTTGAAGGAGCTTTCGAAGACATCCATCGTCA
ATAATCTGACGCTGATCCTTTGTTGGTCTGCACCCGAAGCTGCACACTAT
CTTGAATTGTTCAAGTCTTCTGAAAACTCTCAACCTACTGCTATTCGCAC
GCAGCAAGCTCAGTCATACAAGGAATCTCTTGTTGAGTTCGTCACGACAC
CCCGAAGCATTAATAAATCAGATGCAGCAAGCTTGATATCTACGTTTGGG
AGCCTGCAGAATGCGGTTAATGCCCAACCAGAGCAGATCAGTGCAGTACC
CGGATGGGGTGAGAAGAAGGTCAGGCAGTGGTGTACTACAGTAAGAGAAG
GCTTTAGGGCCGAGTCGGCGAAGAGGGTAACTGCCAGGGGAGGAATCGCT
AGAGGTCATGCAACCGGGGTTGTTGAGGATCATGGAGACCGAACCTTCAA
TTCTTTGGAAACAAGTGAAGACAACGCCGCAGAATCAATCCTAGCAGATG
CAGAGGAGGGTCGGCTAGAAACACGGAGACAAGCTATCGAAGAGCGACGA
TTGCAGGAGTCGAGTCAGCAGGAGGAAGAGATGAGTGAGGGCATCATGGC
GGCTCTGGCGAAGTATCGACAGGACGGCGGTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:160230..161213+ >CAN33_4040-T1 ID=CAN33_4040-T1|Name=CAN33_4040-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=984bp|location=Sequence derived from alignment at NKJJ01000019.1:160230..161213+ (Aspergillus niger FDAARGOS_311)
ATGGACCCAGTAGCACGTTCAGAATCTGCTACGCCCCGAGCGTCTGGTGC
CTCGACGCCGCAGCCACCGTCTAAAGTCCAGCAGCCTAAGCCACAAGCAC
TCCCCAGCAGGTCTGGTCCATCTGCCATCCTCGTGTCAACGCGACAAAAA
GGCAATCCGATATTGAATCATATCAAACTACTGCCATGGGAATATGCAGA
TATTCCGGCCGACTATGTGGTCGGAAACACCACCTGTGCTCTATTTCTTT
CCTTGAAGTACCACCGGTTACATCCCGAATATATCTACTCGCGAATTCGT
CTCATAGCAGGAAAATACCTTTTACGTATTATCCTGGTTATTGTGGATAT
CCCGAATCATGAAGAAAGCTTGAAGGAGCTTTCGAAGACATCCATCGTCA
ATAATCTGACGCTGATCCTTTGTTGGTCTGCACCCGAAGCTGCACACTAT
CTTGAATTGTTCAAGTCTTCTGAAAACTCTCAACCTACTGCTATTCGCAC
GCAGCAAGCTCAGTCATACAAGGAATCTCTTGTTGAGTTCGTCACGACAC
CCCGAAGCATTAATAAATCAGATGCAGCAAGCTTGATATCTACGTTTGGG
AGCCTGCAGAATGCGGTTAATGCCCAACCAGAGCAGATCAGTGCAGTACC
CGGATGGGGTGAGAAGAAGGTCAGGCAGTGGTGTACTACAGTAAGAGAAG
GCTTTAGGGCCGAGTCGGCGAAGAGGGTAACTGCCAGGGGAGGAATCGCT
AGAGGTCATGCAACCGGGGTTGTTGAGGATCATGGAGACCGAACCTTCAA
TTCTTTGGAAACAAGTGAAGACAACGCCGCAGAATCAATCCTAGCAGATG
CAGAGGAGGGTCGGCTAGAAACACGGAGACAAGCTATCGAAGAGCGACGA
TTGCAGGAGTCGAGTCAGCAGGAGGAAGAGATGAGTGAGGGCATCATGGC
GGCTCTGGCGAAGTATCGACAGGACGGCGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004519 | endonuclease activity |
| GO:0003684 | damaged DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264DOU |
| DBxref | InterPro:IPR011335 |
| DBxref | InterPro:IPR010994 |
| DBxref | InterPro:IPR004579 |
| DBxref | PFAM:PF03834 |
| Product | DNA repair protein rad10 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:160230..161213 + |
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