You are here

Home

CAN33_40425-T1, CAN33_40425-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40425-T1
Unique NameCAN33_40425-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2701326..2702582-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40425-T1 ID=CAN33_40425-T1|Name=CAN33_40425-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1257bp|location=Sequence derived from alignment at NKJJ01000017.1:2701326..2702582- (Aspergillus niger FDAARGOS_311)
ATGACCACAGTATTCATGTTAGTCGCTCATCATAAAACCAAAGCACTTTG
ATAGAATATGCATAGCCTAGATAGCTCACACAAGCCACAGAACAGGAGCC
AGCGGCTACATCGGCGGCGACCTTCTATCAGTACTTGTATCCAAGTACCC
CGACCTGCACTACCGCTTGTTAGTCCGAAGCCGCGACAGCGGCCAGAAAA
TCAAGGCACAATATCCTACTGTCGAGATTATACAAGGCAGTCTCGATGAT
TCAGAGACGCTGGTCGCAGAAAGTGCTAGGGCCGATATCATCATCCGTTA
GTGGACACATTCAGTTTTTATTATATACTATCCACCAGAAGGAATACGTA
CCAGCTGACTTTACCGGTATGAAAGACACTGCCGATGCTGCTGACCACCT
TGGCGCAGCCAAGGCAATAGCTCAGGGTGCTCTAGAAGGACACACTGAAG
AACATCCCGTCTATTGGTTGCATACCAGTGGTGCCGGGATCTTCTCGTTC
TTAGACACCGAGACCAAGGTATATGGGGAGAAAGGCGAGAAAATCTATGA
TGATGTGCAGGACATTAAGGAGATTGTGAACTTCCCTGACCACGCGTTCC
ACCGAGATGTGGATAAAGCGGTGTTTGAGGCTGGATCGGTGCGTCCAGAA
GTCCTGAAGACTGCTATCATATCCCCGGTAACTGTTTACGGTAAGCTTCA
GTAGAAACCAAAATGTAAGGGCATGAAATCAACTAATTTAATGCTACAAT
CTAGGTCAAGGACGAGGACCTTGCTCCCAACGCAGCAGACAGATATATGA
GCTAGCCAAACTGACCATCCAATGACAGAAAGTTCCCATAATCGGCCGGG
GCCTCTCATTCGGGACCGATATCCACATTTATGATTTGACCAACCTATAT
GTGATTCTTTTCGAAAGGGCCCTTTCGAAGCAAGATGATGGGCTTTGGGG
TCCGGAGGCATACTACCTCTGTGAGAATGGGGAGCATTGCTGGGGTGAGC
TGGCCCGTTCAATTGGACGAATTTGTGTGGCGGAAGGATTCATCCCATCG
GCCGAAGAGGAGGCTTTTGGCTTCGAGGAGGCACAAAAATGGGCAGGCTA
TGAAGCTGCTAGTTGGGGGCTAAATTCACGGTGTCAGGCCAGTCGTGCCC
GTCTATTGCTGGGGTGGCAGCCGTCTGCGCCATCGTTGGAATCCGAGCTT
CGGGATATCGTGAAGGGGGAATACCGACGCCTACAGGAGGCGGAAAGAGA
TGCCTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:2701326..2702582-

>CAN33_40425-T1 ID=CAN33_40425-T1|Name=CAN33_40425-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3852bp|location=Sequence derived from alignment at NKJJ01000017.1:2701326..2702582- (Aspergillus niger FDAARGOS_311)
TTCCCATAATCGGCCGGGGCCTCTCATTCGGGACCGATATCCACATTTAT
GATTTGACCAACCTATATGTGATTCTTTTCGAAAGGGCCCTTTCGAAGCA
AGATGATGGGCTTTGGGGTCCGGAGGCATACTACCTCTGTGAGAATGGGG
AGCATTGCTGGGGTGAGCTGGCCCGTTCAATTGGACGAATTTGTGTGGCG
GAAGGATTCATCCCATCGGCCGAAGAGGAGGCTTTTGGCTTCGAGGAGGC
ACAAAAATGGGCAGGCTATGAAGCTGCTAGTTGGGGGCTAAATTCACGGT
GTCAGGCCAGTCGTGCCCGTCTATTGCTGGGGTGGCAGCCGTCTGCGCCA
TCGTTGGAATCCGAGCTTCGGGATATCGTGAAGGGGGAATACCGACGCCT
ACAGGAGGCGGAAAGAGATGCCTGAACACTGCCGATGCTGCTGACCACCT
TGGCGCAGCCAAGGCAATAGCTCAGGGTGCTCTAGAAGGACACACTGAAG
AACATCCCGTCTATTGGTTGCATACCAGTGGTGCCGGGATCTTCTCGTTC
TTAGACACCGAGACCAAGGTATATGGGGAGAAAGGCGAGAAAATCTATGA
TGATGTGCAGGACATTAAGGAGATTGTGAACTTCCCTGACCACGCGTTCC
ACCGAGATGTGGATAAAGCGGTGTTTGAGGCTGGATCGGTGCGTCCAGAA
GTCCTGAAGACTGCTATCATATCCCCGGTAACTGTTTACGAACAGGAGCC
AGCGGCTACATCGGCGGCGACCTTCTATCAGTACTTGTATCCAAGTACCC
CGACCTGCACTACCGCTTGTTAGTCCGAAGCCGCGACAGCGGCCAGAAAA
TCAAGGCACAATATCCTACTGTCGAGATTATACAAGGCAGTCTCGATGAT
TCAGAGACGCTGGTCGCAGAAAGTGCTAGGGCCGATATCATCATCCATGA
CCACAGTATTCATTTCCCATAATCGGCCGGGGCCTCTCATTCGGGACCGA
TATCCACATTTATGATTTGACCAACCTATATGTGATTCTTTTCGAAAGGG
CCCTTTCGAAGCAAGATGATGGGCTTTGGGGTCCGGAGGCATACTACCTC
TGTGAGAATGGGGAGCATTGCTGGGGTGAGCTGGCCCGTTCAATTGGACG
AATTTGTGTGGCGGAAGGATTCATCCCATCGGCCGAAGAGGAGGCTTTTG
GCTTCGAGGAGGCACAAAAATGGGCAGGCTATGAAGCTGCTAGTTGGGGG
CTAAATTCACGGTGTCAGGCCAGTCGTGCCCGTCTATTGCTGGGGTGGCA
GCCGTCTGCGCCATCGTTGGAATCCGAGCTTCGGGATATCGTGAAGGGGG
AATACCGACGCCTACAGGAGGCGGAAAGAGATGCCTGAACACTGCCGATG
CTGCTGACCACCTTGGCGCAGCCAAGGCAATAGCTCAGGGTGCTCTAGAA
GGACACACTGAAGAACATCCCGTCTATTGGTTGCATACCAGTGGTGCCGG
GATCTTCTCGTTCTTAGACACCGAGACCAAGGTATATGGGGAGAAAGGCG
AGAAAATCTATGATGATGTGCAGGACATTAAGGAGATTGTGAACTTCCCT
GACCACGCGTTCCACCGAGATGTGGATAAAGCGGTGTTTGAGGCTGGATC
GGTGCGTCCAGAAGTCCTGAAGACTGCTATCATATCCCCGGTAACTGTTT
ACGAACAGGAGCCAGCGGCTACATCGGCGGCGACCTTCTATCAGTACTTG
TATCCAAGTACCCCGACCTGCACTACCGCTTGTTAGTCCGAAGCCGCGAC
AGCGGCCAGAAAATCAAGGCACAATATCCTACTGTCGAGATTATACAAGG
CAGTCTCGATGATTCAGAGACGCTGGTCGCAGAAAGTGCTAGGGCCGATA
TCATCATCCATGACCACAGTATTCATTTCCCATAATCGGCCGGGGCCTCT
CATTCGGGACCGATATCCACATTTATGATTTGACCAACCTATATGTGATT
CTTTTCGAAAGGGCCCTTTCGAAGCAAGATGATGGGCTTTGGGGTCCGGA
GGCATACTACCTCTGTGAGAATGGGGAGCATTGCTGGGGTGAGCTGGCCC
GTTCAATTGGACGAATTTGTGTGGCGGAAGGATTCATCCCATCGGCCGAA
GAGGAGGCTTTTGGCTTCGAGGAGGCACAAAAATGGGCAGGCTATGAAGC
TGCTAGTTGGGGGCTAAATTCACGGTGTCAGGCCAGTCGTGCCCGTCTAT
TGCTGGGGTGGCAGCCGTCTGCGCCATCGTTGGAATCCGAGCTTCGGGAT
ATCGTGAAGGGGGAATACCGACGCCTACAGGAGGCGGAAAGAGATGCCTG
AACACTGCCGATGCTGCTGACCACCTTGGCGCAGCCAAGGCAATAGCTCA
GGGTGCTCTAGAAGGACACACTGAAGAACATCCCGTCTATTGGTTGCATA
CCAGTGGTGCCGGGATCTTCTCGTTCTTAGACACCGAGACCAAGGTATAT
GGGGAGAAAGGCGAGAAAATCTATGATGATGTGCAGGACATTAAGGAGAT
TGTGAACTTCCCTGACCACGCGTTCCACCGAGATGTGGATAAAGCGGTGT
TTGAGGCTGGATCGGTGCGTCCAGAAGTCCTGAAGACTGCTATCATATCC
CCGGTAACTGTTTACGAACAGGAGCCAGCGGCTACATCGGCGGCGACCTT
CTATCAGTACTTGTATCCAAGTACCCCGACCTGCACTACCGCTTGTTAGT
CCGAAGCCGCGACAGCGGCCAGAAAATCAAGGCACAATATCCTACTGTCG
AGATTATACAAGGCAGTCTCGATGATTCAGAGACGCTGGTCGCAGAAAGT
GCTAGGGCCGATATCATCATCCATGACCACAGTATTCATTTCCCATAATC
GGCCGGGGCCTCTCATTCGGGACCGATATCCACATTTATGATTTGACCAA
CCTATATGTGATTCTTTTCGAAAGGGCCCTTTCGAAGCAAGATGATGGGC
TTTGGGGTCCGGAGGCATACTACCTCTGTGAGAATGGGGAGCATTGCTGG
GGTGAGCTGGCCCGTTCAATTGGACGAATTTGTGTGGCGGAAGGATTCAT
CCCATCGGCCGAAGAGGAGGCTTTTGGCTTCGAGGAGGCACAAAAATGGG
CAGGCTATGAAGCTGCTAGTTGGGGGCTAAATTCACGGTGTCAGGCCAGT
CGTGCCCGTCTATTGCTGGGGTGGCAGCCGTCTGCGCCATCGTTGGAATC
CGAGCTTCGGGATATCGTGAAGGGGGAATACCGACGCCTACAGGAGGCGG
AAAGAGATGCCTGAACACTGCCGATGCTGCTGACCACCTTGGCGCAGCCA
AGGCAATAGCTCAGGGTGCTCTAGAAGGACACACTGAAGAACATCCCGTC
TATTGGTTGCATACCAGTGGTGCCGGGATCTTCTCGTTCTTAGACACCGA
GACCAAGGTATATGGGGAGAAAGGCGAGAAAATCTATGATGATGTGCAGG
ACATTAAGGAGATTGTGAACTTCCCTGACCACGCGTTCCACCGAGATGTG
GATAAAGCGGTGTTTGAGGCTGGATCGGTGCGTCCAGAAGTCCTGAAGAC
TGCTATCATATCCCCGGTAACTGTTTACGAACAGGAGCCAGCGGCTACAT
CGGCGGCGACCTTCTATCAGTACTTGTATCCAAGTACCCCGACCTGCACT
ACCGCTTGTTAGTCCGAAGCCGCGACAGCGGCCAGAAAATCAAGGCACAA
TATCCTACTGTCGAGATTATACAAGGCAGTCTCGATGATTCAGAGACGCT
GGTCGCAGAAAGTGCTAGGGCCGATATCATCATCCATGACCACAGTATTC
AT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40425CAN33_40425Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40425-T1CAN33_40425-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40425-T1.cdsCAN33_40425-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40425-T1.exon4CAN33_40425-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_40425-T1.exon3CAN33_40425-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40425-T1.exon2CAN33_40425-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40425-T1.exon1CAN33_40425-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR016040
DBxrefPFAM:PF01118
ProductSemialdehyde dehydrogenase NAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2701326..2702582 -
Powered by Drupal