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CAN33_40430-T1, CAN33_40430-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40430-T1
Unique NameCAN33_40430-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2703036..2704680+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40430-T1 ID=CAN33_40430-T1|Name=CAN33_40430-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1645bp|location=Sequence derived from alignment at NKJJ01000017.1:2703036..2704680+ (Aspergillus niger FDAARGOS_311)
ATGTGTTTAGTGGTCAGTAATTGATGCCATTGTCATTGGGACCCAGAAAA
CTGTTAAGCTTCGTTCTCTGGTCAATTATTACTCGTGAATTGCAGGCAAC
GGTTTGGAGTATTCGACCACACACAATAATAGTTCAACATGCTTAGCTAG
GCAATGCAAGACTCTTCTGAGACTGAATCCCTAGCATAAAAGCATAATTC
AGCACCCTGTAGGCCTTCTAGGTACACAGAAATAACTGCCTATAGAGACG
TTTCAGTTGTAGTATTTGTCATAGTGGTAGTGACGCTTCTTTGTGACGGG
TGCGGTATAGCCCAGCCTCAGGCACCACCCAGACTAACCCCAAAGGGTGA
TATCAGCCTAAGGAATGACGCGACTGGGACGCGTGCCTCCCCACTAATGA
AACCCTCGAACGCGAATTCGCTGCACTTTCAGGTCCCTCAATAAATTCAC
CCCAACCTGAAAGACACGCCGTTATCCTTCCTACGCACTCAATTCCTTCT
GTCAGTTCTTTACGATTTCCAATCTTCACGATACTCCTTTCACCCGCTAA
CCACCATCTACTTATCTCAGCCTCTCCTCTTTCTTCCACTTCTCCTTCTA
ATTAGCTTCTCACCGTACTCACATACCATCACATCAAAAGTGAGCGTCAC
AGCTTCAACTGGTTCAGAATTCTAAGCTAACAGCTTACTCAGTGCTTGAA
GCTCGCCTAGAACAAGCCAGTCTTCTGAAGCGCGTGAGTAACTCTACATC
ATATTGTTGCATGTCAATGCTTGATTGCTGACATTTGGTTTCTTTCTTCA
GGTCGTCGACGCCATCAAGGACCTGGTCCAAGACTGCAACTTCGACTGCA
ATGACTCCGGTATCTCACTTCAGGCCATGGACAACTCCCATGTTGCTCTC
GTCTCCATGATGCTCAAGGCCGAGGGATTCTCCCCTTACCGTTGCGACCG
TAACATTGCCCTCGGTATCAACCTGCTCTCCCTGACCAAGGTCCTGCGCG
CCGCCCAGAATGAAGATATCCTCACTCTCAAGGCTGAGGACTCTCCCGAT
GCCGTCAACCTGATGTTCGAGAGTGCCGAGACGGATAGACTTAGCGAATA
TGATATTAAGTTGATGGATATTGACCAGGAGCACCTGGCCATCCCGGAGA
CAGAGTACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTTCCAGCGTATC
TGCAGGGATCTGAATGCCCTCTCTGAGTCCGGTATGTTCTTCTTATTGGC
AACGGGTGTGATCCGCGACTAATTCAACTCCTAGTTGTCATTGAGGCTAC
GAAGGAGGGTGTCAAGTTCTCCTGCCAGGGTGACATTGGCAGTGGCTCCG
TCACCGTCCGTCAGCACACCAACGTCGAGAACCCCGCACAGAACGTCTCC
ATCTCCCTCACCGAACCCGTTGCCCTCACTTTCTCCCTCAAGTACCTCGT
CAACTTCTGCAAGGCTACCAACCTGTCGAACAAGGTCACCCTGTGCCTGT
CGCAGGAGGTGCCGCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCATCTG
AGATTCTACCTGGCTCCTAAGGTACGATGACTCCTCATCTGGCTTGTTTG
AGAGTTGTACTGACTTATGATATTTAGATTGGCGATGAGGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2703036..2704680+

>CAN33_40430-T1 ID=CAN33_40430-T1|Name=CAN33_40430-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3900bp|location=Sequence derived from alignment at NKJJ01000017.1:2703036..2704680+ (Aspergillus niger FDAARGOS_311)
ATGTTGCTTGAAGCTCGCCTAGAACAAGCCAGTCTTCTGAAGCGCGTCGT
CGACGCCATCAAGGACCTGGTCCAAGACTGCAACTTCGACTGCAATGACT
CCGGTATCTCACTTCAGGCCATGGACAACTCCCATGTTGCTCTCGTCTCC
ATGATGCTCAAGGCCGAGGGATTCTCCCCTTACCGTTGCGACCGTAACAT
TGCCCTCGGTATCAACCTGCTCTCCCTGACCAAGGTCCTGCGCGCCGCCC
AGAATGAAGATATCCTCACTCTCAAGGCTGAGGACTCTCCCGATGCCGTC
AACCTGATGTTCGAGAGTGCCGAGACGGATAGACTTAGCGAATATGATAT
TAAGTTGATGGATATTGACCAGGAGCACCTGGCCATCCCGGAGACAGAGT
ACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTTCCAGCGTATCTGCAGG
GATCTGAATGCCCTCTCTGAGTCCGTTGTCATTGAGGCTACGAAGGAGGG
TGTCAAGTTCTCCTGCCAGGGTGACATTGGCAGTGGCTCCGTCACCGTCC
GTCAGCACACCAACGTCGAGAACCCCGCACAGAACGTCTCCATCTCCCTC
ACCGAACCCGTTGCCCTCACTTTCTCCCTCAAGTACCTCGTCAACTTCTG
CAAGGCTACCAACCTGTCGAACAAGGTCACCCTGTGCCTGTCGCAGGAGG
TGCCGCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCATCTGAGATTCTAC
CTGGCTCCTAAGATTGGCGATGAGGAGTAAATGTTGCTTGAAGCTCGCCT
AGAACAAGCCAGTCTTCTGAAGCGCGTCGTCGACGCCATCAAGGACCTGG
TCCAAGACTGCAACTTCGACTGCAATGACTCCGGTATCTCACTTCAGGCC
ATGGACAACTCCCATGTTGCTCTCGTCTCCATGATGCTCAAGGCCGAGGG
ATTCTCCCCTTACCGTTGCGACCGTAACATTGCCCTCGGTATCAACCTGC
TCTCCCTGACCAAGGTCCTGCGCGCCGCCCAGAATGAAGATATCCTCACT
CTCAAGGCTGAGGACTCTCCCGATGCCGTCAACCTGATGTTCGAGAGTGC
CGAGACGGATAGACTTAGCGAATATGATATTAAGTTGATGGATATTGACC
AGGAGCACCTGGCCATCCCGGAGACAGAGTACGCTGCTACGGTAGAGATG
CCGGCAGCAGAGTTCCAGCGTATCTGCAGGGATCTGAATGCCCTCTCTGA
GTCCGTTGTCATTGAGGCTACGAAGGAGGGTGTCAAGTTCTCCTGCCAGG
GTGACATTGGCAGTGGCTCCGTCACCGTCCGTCAGCACACCAACGTCGAG
AACCCCGCACAGAACGTCTCCATCTCCCTCACCGAACCCGTTGCCCTCAC
TTTCTCCCTCAAGTACCTCGTCAACTTCTGCAAGGCTACCAACCTGTCGA
ACAAGGTCACCCTGTGCCTGTCGCAGGAGGTGCCGCTCCTCGTTGAGTAT
GGCCTCGGTAGCGGTCATCTGAGATTCTACCTGGCTCCTAAGATTGGCGA
TGAGGAGTAAATGTTGCTTGAAGCTCGCCTAGAACAAGCCAGTCTTCTGA
AGCGCGTCGTCGACGCCATCAAGGACCTGGTCCAAGACTGCAACTTCGAC
TGCAATGACTCCGGTATCTCACTTCAGGCCATGGACAACTCCCATGTTGC
TCTCGTCTCCATGATGCTCAAGGCCGAGGGATTCTCCCCTTACCGTTGCG
ACCGTAACATTGCCCTCGGTATCAACCTGCTCTCCCTGACCAAGGTCCTG
CGCGCCGCCCAGAATGAAGATATCCTCACTCTCAAGGCTGAGGACTCTCC
CGATGCCGTCAACCTGATGTTCGAGAGTGCCGAGACGGATAGACTTAGCG
AATATGATATTAAGTTGATGGATATTGACCAGGAGCACCTGGCCATCCCG
GAGACAGAGTACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTTCCAGCG
TATCTGCAGGGATCTGAATGCCCTCTCTGAGTCCGTTGTCATTGAGGCTA
CGAAGGAGGGTGTCAAGTTCTCCTGCCAGGGTGACATTGGCAGTGGCTCC
GTCACCGTCCGTCAGCACACCAACGTCGAGAACCCCGCACAGAACGTCTC
CATCTCCCTCACCGAACCCGTTGCCCTCACTTTCTCCCTCAAGTACCTCG
TCAACTTCTGCAAGGCTACCAACCTGTCGAACAAGGTCACCCTGTGCCTG
TCGCAGGAGGTGCCGCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCATCT
GAGATTCTACCTGGCTCCTAAGATTGGCGATGAGGAGTAAATGTTGCTTG
AAGCTCGCCTAGAACAAGCCAGTCTTCTGAAGCGCGTCGTCGACGCCATC
AAGGACCTGGTCCAAGACTGCAACTTCGACTGCAATGACTCCGGTATCTC
ACTTCAGGCCATGGACAACTCCCATGTTGCTCTCGTCTCCATGATGCTCA
AGGCCGAGGGATTCTCCCCTTACCGTTGCGACCGTAACATTGCCCTCGGT
ATCAACCTGCTCTCCCTGACCAAGGTCCTGCGCGCCGCCCAGAATGAAGA
TATCCTCACTCTCAAGGCTGAGGACTCTCCCGATGCCGTCAACCTGATGT
TCGAGAGTGCCGAGACGGATAGACTTAGCGAATATGATATTAAGTTGATG
GATATTGACCAGGAGCACCTGGCCATCCCGGAGACAGAGTACGCTGCTAC
GGTAGAGATGCCGGCAGCAGAGTTCCAGCGTATCTGCAGGGATCTGAATG
CCCTCTCTGAGTCCGTTGTCATTGAGGCTACGAAGGAGGGTGTCAAGTTC
TCCTGCCAGGGTGACATTGGCAGTGGCTCCGTCACCGTCCGTCAGCACAC
CAACGTCGAGAACCCCGCACAGAACGTCTCCATCTCCCTCACCGAACCCG
TTGCCCTCACTTTCTCCCTCAAGTACCTCGTCAACTTCTGCAAGGCTACC
AACCTGTCGAACAAGGTCACCCTGTGCCTGTCGCAGGAGGTGCCGCTCCT
CGTTGAGTATGGCCTCGGTAGCGGTCATCTGAGATTCTACCTGGCTCCTA
AGATTGGCGATGAGGAGTAAATGTTGCTTGAAGCTCGCCTAGAACAAGCC
AGTCTTCTGAAGCGCGTCGTCGACGCCATCAAGGACCTGGTCCAAGACTG
CAACTTCGACTGCAATGACTCCGGTATCTCACTTCAGGCCATGGACAACT
CCCATGTTGCTCTCGTCTCCATGATGCTCAAGGCCGAGGGATTCTCCCCT
TACCGTTGCGACCGTAACATTGCCCTCGGTATCAACCTGCTCTCCCTGAC
CAAGGTCCTGCGCGCCGCCCAGAATGAAGATATCCTCACTCTCAAGGCTG
AGGACTCTCCCGATGCCGTCAACCTGATGTTCGAGAGTGCCGAGACGGAT
AGACTTAGCGAATATGATATTAAGTTGATGGATATTGACCAGGAGCACCT
GGCCATCCCGGAGACAGAGTACGCTGCTACGGTAGAGATGCCGGCAGCAG
AGTTCCAGCGTATCTGCAGGGATCTGAATGCCCTCTCTGAGTCCGTTGTC
ATTGAGGCTACGAAGGAGGGTGTCAAGTTCTCCTGCCAGGGTGACATTGG
CAGTGGCTCCGTCACCGTCCGTCAGCACACCAACGTCGAGAACCCCGCAC
AGAACGTCTCCATCTCCCTCACCGAACCCGTTGCCCTCACTTTCTCCCTC
AAGTACCTCGTCAACTTCTGCAAGGCTACCAACCTGTCGAACAAGGTCAC
CCTGTGCCTGTCGCAGGAGGTGCCGCTCCTCGTTGAGTATGGCCTCGGTA
GCGGTCATCTGAGATTCTACCTGGCTCCTAAGATTGGCGATGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030337DNA polymerase processivity factor activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006275regulation of DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PCN1CAN33_40430Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40430-T1CAN33_40430-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40430-T1.exon1CAN33_40430-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_40430-T1.exon2CAN33_40430-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40430-T1.exon3CAN33_40430-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40430-T1.exon4CAN33_40430-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_40430-T1.exon5CAN33_40430-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40430-T1.cdsCAN33_40430-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR022659
DBxrefInterPro:IPR022649
DBxrefInterPro:IPR022648
DBxrefInterPro:IPR000730
DBxrefPFAM:PF04139
DBxrefPFAM:PF02144
DBxrefPFAM:PF00705
DBxrefPFAM:PF02747
ProductDNA polymerase delta processivity factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2703036..2704680 +
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