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CAN33_40465-T1, CAN33_40465-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40465-T1
Unique NameCAN33_40465-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2727090..2727674-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40465-T1 ID=CAN33_40465-T1|Name=CAN33_40465-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=585bp|location=Sequence derived from alignment at NKJJ01000017.1:2727090..2727674- (Aspergillus niger FDAARGOS_311)
ATGGCTAGCGAAAAGAAAGATAAGCTTGAGGGTAAGTCCCCGGACGCGGC
ATTGTCAAATGATGGCTAACATGACCGTTCAGCGCAGATCAAGTCCGTCG
ATATGGTAAGAGGAATTGCTGGAGGTAACCAAGAATTGTGCTTACAACAT
GGCAGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTTGGTATGGTCAGC
CCTACGGGTCACCTCGAAAAGGAGGGCTAATACAACGGCTAGCAATTGAG
GCAATGGACAAGTACCACATTGAGAAGGTAGGTTCGGTGTCATCTGTTGG
TTGACTATGCTAACGACAGCAGGATATCGCCCAATACATCAAGCGAGAGG
TCAGCATTGCGCACTGTATCCGGACCACCCCTCATTGCTCACAATCTACA
GTTCGATTCGCGCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGGAACT
TTGGCAGCTTCGTCACGCATGGTGAGTGTCATGGCCAGGGCATCAGGGGT
ACGGGCTAACTTTCGAGCAGAGACGAAACACTTCATCTACTTCTACCTCG
GGCACTGCGCCATCCTCCTTTTCAAGACCCAATGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2727090..2727674-

>CAN33_40465-T1 ID=CAN33_40465-T1|Name=CAN33_40465-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1995bp|location=Sequence derived from alignment at NKJJ01000017.1:2727090..2727674- (Aspergillus niger FDAARGOS_311)
AGACGAAACACTTCATCTACTTCTACCTCGGGCACTGCGCCATCCTCCTT
TTCAAGACCCAATGATTCGATTCGCGCAAGGGTGCGACATGGCACTGTGT
AGTCGGAAGGAACTTTGGCAGCTTCGTCACGCATGGATATCGCCCAATAC
ATCAAGCGAGAGCAATTGAGGCAATGGACAAGTACCACATTGAGAAGACG
GAGGATATGCAGCAGGAGGCTGTTGAAGTTGCGCAGATCAAGTCCGTCGA
TATGATGGCTAGCGAAAAGAAAGATAAGCTTGAGGAGACGAAACACTTCA
TCTACTTCTACCTCGGGCACTGCGCCATCCTCCTTTTCAAGACCCAATGA
TTCGATTCGCGCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGGAACTT
TGGCAGCTTCGTCACGCATGGATATCGCCCAATACATCAAGCGAGAGCAA
TTGAGGCAATGGACAAGTACCACATTGAGAAGACGGAGGATATGCAGCAG
GAGGCTGTTGAAGTTGCGCAGATCAAGTCCGTCGATATGATGGCTAGCGA
AAAGAAAGATAAGCTTGAGGAGACGAAACACTTCATCTACTTCTACCTCG
GGCACTGCGCCATCCTCCTTTTCAAGACCCAATGATTCGATTCGCGCAAG
GGTGCGACATGGCACTGTGTAGTCGGAAGGAACTTTGGCAGCTTCGTCAC
GCATGGATATCGCCCAATACATCAAGCGAGAGCAATTGAGGCAATGGACA
AGTACCACATTGAGAAGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTT
GCGCAGATCAAGTCCGTCGATATGATGGCTAGCGAAAAGAAAGATAAGCT
TGAGGAGACGAAACACTTCATCTACTTCTACCTCGGGCACTGCGCCATCC
TCCTTTTCAAGACCCAATGATTCGATTCGCGCAAGGGTGCGACATGGCAC
TGTGTAGTCGGAAGGAACTTTGGCAGCTTCGTCACGCATGGATATCGCCC
AATACATCAAGCGAGAGCAATTGAGGCAATGGACAAGTACCACATTGAGA
AGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTTGCGCAGATCAAGTCC
GTCGATATGATGGCTAGCGAAAAGAAAGATAAGCTTGAGGAGACGAAACA
CTTCATCTACTTCTACCTCGGGCACTGCGCCATCCTCCTTTTCAAGACCC
AATGATTCGATTCGCGCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGG
AACTTTGGCAGCTTCGTCACGCATGGATATCGCCCAATACATCAAGCGAG
AGCAATTGAGGCAATGGACAAGTACCACATTGAGAAGACGGAGGATATGC
AGCAGGAGGCTGTTGAAGTTGCGCAGATCAAGTCCGTCGATATGATGGCT
AGCGAAAAGAAAGATAAGCTTGAGGAGACGAAACACTTCATCTACTTCTA
CCTCGGGCACTGCGCCATCCTCCTTTTCAAGACCCAATGATTCGATTCGC
GCAAGGGTGCGACATGGCACTGTGTAGTCGGAAGGAACTTTGGCAGCTTC
GTCACGCATGGATATCGCCCAATACATCAAGCGAGAGCAATTGAGGCAAT
GGACAAGTACCACATTGAGAAGACGGAGGATATGCAGCAGGAGGCTGTTG
AAGTTGCGCAGATCAAGTCCGTCGATATGATGGCTAGCGAAAAGAAAGAT
AAGCTTGAGGAGACGAAACACTTCATCTACTTCTACCTCGGGCACTGCGC
CATCCTCCTTTTCAAGACCCAATGATTCGATTCGCGCAAGGGTGCGACAT
GGCACTGTGTAGTCGGAAGGAACTTTGGCAGCTTCGTCACGCATGGATAT
CGCCCAATACATCAAGCGAGAGCAATTGAGGCAATGGACAAGTACCACAT
TGAGAAGACGGAGGATATGCAGCAGGAGGCTGTTGAAGTTGCGCAGATCA
AGTCCGTCGATATGATGGCTAGCGAAAAGAAAGATAAGCTTGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005875microtubule associated complex
GO:0030286dynein complex
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40465CAN33_40465Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40465-T1CAN33_40465-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40465-T1.cdsCAN33_40465-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40465-T1.exon7CAN33_40465-T1.exon7Aspergillus niger FDAARGOS_311exon
CAN33_40465-T1.exon6CAN33_40465-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_40465-T1.exon5CAN33_40465-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_40465-T1.exon4CAN33_40465-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_40465-T1.exon3CAN33_40465-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40465-T1.exon2CAN33_40465-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40465-T1.exon1CAN33_40465-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR019763
DBxrefInterPro:IPR037177
DBxrefInterPro:IPR001372
DBxrefPFAM:PF01221
ProductDynein light chain type 1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2727090..2727674 -
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