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CAN33_40545-T1, CAN33_40545-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40545-T1
Unique NameCAN33_40545-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2767461..2769030-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40545-T1 ID=CAN33_40545-T1|Name=CAN33_40545-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1570bp|location=Sequence derived from alignment at NKJJ01000017.1:2767461..2769030- (Aspergillus niger FDAARGOS_311)
ATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGG
TGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCG
ACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCC
GACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCA
AGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGG
GGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAG
GTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTC
GACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGA
GATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAA
GACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAA
GAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTT
TGTGTCTAAGTGACCGGTAAGCTATGTCCGGAAGCGTCGTGGATATACCA
TGCTAATGTTGTCTAGGGCACCGATCGAGGAATCGCGGAAATGGGGCATT
TACGACACTACGAACCTGTTGTTCAAGACATACTTCAAGCTTAACACCGT
TGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACC
TTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTAC
TATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAGTATGTGC
TTCAATCATCAATGTTAGTTGCCGGTGCTAATAGCTGGTTTCAATAGGCT
GAAGAGCATTTGTCGTACGCATGGAGGATGTGCAACAAACATGCCACAAA
GAATAGAGAGTCAGTACTCCACATGCCGCCCCATGCTACATTGCTGACTA
CTTCAAGATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACA
CATACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAA
GCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGT
TCGATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATA
TACTTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCG
CAAGGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTC
CTATCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGG
ATCGGTACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGA
ATGTCTGTTGTCGAACCTTATCTACAAGGTGCGTGTTGAGGTGCCCGAAC
TCTATCAAAGCATTTGACTGACCAAAATTGTAGGGGTTGATGAAAGGATA
CATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCAT
TCCCTGGAACGGGGGTTTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2767461..2769030-

>CAN33_40545-T1 ID=CAN33_40545-T1|Name=CAN33_40545-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6810bp|location=Sequence derived from alignment at NKJJ01000017.1:2767461..2769030- (Aspergillus niger FDAARGOS_311)
GGGTTGATGAAAGGATACATTGCCCGTGAGCGCGGCATGGTCGTATTGAG
CAAAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAAATTGATTCTCACC
TACCTCGTCCCCTGCCACCTCGTCACCACACATACCCTGCCCAGCAAAAA
GCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCG
ACTGCATCAAAAGGGGAGACCTGGGCGGGTTCGATGCCGCAATGACAGCC
GGGGAAGAGGAATTTGTTAAGAGACGCATATACTTGCCCCTGGAAAGGGG
ACGCGATATCGCTTTACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTG
GATTTGACGAGCCCAAGGAAGGACAGCCTCCTATCCGCCGCACACGGGTT
CCCGTTGCCGAGTTTGCAGCGGCATTAAGGATCGGTACTCATGCTGACGA
CCGGTCCCGCATAGACATTGATGAGGTTGAATGTCTGTTGTCGAACCTTA
TCTACAAGGCTGAAGAGCATTTGTCGTACGCATGGAGGATGTGCAACAAA
CATGCCACAAAGAATAGAGAGGCACCGATCGAGGAATCGCGGAAATGGGG
CATTTACGACACTACGAACCTGTTGTTCAAGACATACTTCAAGCTTAACA
CCGTTGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCC
GACCTTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGA
GTACTATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAATGT
CCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGGTGCC
CGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCGACCG
ATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCCGACC
TCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCAAGAG
CAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGGGGGA
GATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAGGTGT
TCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTCGACA
GGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGAGATA
TTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAAGACT
CCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAAGAAT
CCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTTTGTG
TCTAAGTGACCGGGGTTGATGAAAGGATACATTGCCCGTGAGCGCGGCAT
GGTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAAA
TTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACACATACCCT
GCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCC
GTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGTTCGATGCC
GCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATATACTTGCC
CCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCGCAAGGTCT
TTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTCCTATCCGC
CGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGGATCGGTAC
TCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGAATGTCTGT
TGTCGAACCTTATCTACAAGGCTGAAGAGCATTTGTCGTACGCATGGAGG
ATGTGCAACAAACATGCCACAAAGAATAGAGAGGCACCGATCGAGGAATC
GCGGAAATGGGGCATTTACGACACTACGAACCTGTTGTTCAAGACATACT
TCAAGCTTAACACCGTTGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAAT
GCCTCGTCTGCCGACCTTCCTGGCTTGGACGCCTTCCCCAAGTCCCATAT
TGTCACCTTTGAGTACTATGTCGGTGTTATACACTTTCTGGATGAGAATT
ATGCCGAAATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATC
GGCTCTGGTGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGA
GTACCCCGACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATG
TCTCCGCCGACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTT
CCCAAGCAAGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAA
AGCTGTGGGGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTT
GGGTGAAGGTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGG
GGATACTCGACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTC
TGTCGGGAGATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTT
CTGCCCAAGACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACG
GATGCCAAGAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAAT
GTTCACTTTGTGTCTAAGTGACCGGGGTTGATGAAAGGATACATTGCCCG
TGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGAA
CGGGGGTTTAAATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCAC
CACACATACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCG
AGAAGCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGC
GGGTTCGATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACG
CATATACTTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCT
TCCGCAAGGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAG
CCTCCTATCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATT
AAGGATCGGTACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGG
TTGAATGTCTGTTGTCGAACCTTATCTACAAGGCTGAAGAGCATTTGTCG
TACGCATGGAGGATGTGCAACAAACATGCCACAAAGAATAGAGAGGCACC
GATCGAGGAATCGCGGAAATGGGGCATTTACGACACTACGAACCTGTTGT
TCAAGACATACTTCAAGCTTAACACCGTTGGCCTCTCCAAGAACTTGCTG
CGGGCCCTCAATGCCTCGTCTGCCGACCTTCCTGGCTTGGACGCCTTCCC
CAAGTCCCATATTGTCACCTTTGAGTACTATGTCGGTGTTATACACTTTC
TGGATGAGAATTATGCCGAAATGTCCAATATCTTTGATGATTTCAAGGAA
GGCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGCATCTCTCTCCCCCGT
CGCGACTGCGGAGTACCCCGACCGATTGAAGTCGTTCTATTACTTTTCTA
ACGCCGCACATGTCTCCGCCGACCTCCGATACTCGCTCTTCCAGGCGAAT
GGCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTGGGTCGATATCTTTAC
CGCTTATTGGAAAGCTGTGGGGGAGATTGTTCGATTTGACGACTCCCCAA
GACATGCCAGTTGGGTGAAGGTGTTCGATGCTTGGAAGGATACGGCAAAT
CAATTAATCAGGGGATACTCGACAGGCAGTTTGCAAGCCTGGACAGTGCC
ATGCTTGTATTCTGTCGGGAGATATTTGCGGGCATTCGCGATGAAGGCAG
ATGCTGAGCTTTCTGCCCAAGACTCCGTCACTTTCGACGATCGCTTCCAA
GATGATGCGACGGATGCCAAGAATCCAAAGTTGGAGGAAGCTACACGAGT
GCTCAACAGAATGTTCACTTTGTGTCTAAGTGACCGGGGTTGATGAAAGG
ATACATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTG
CATTCCCTGGAACGGGGGTTTAAATTGATTCTCACCTACCTCGTCCCCTG
CCACCTCGTCACCACACATACCCTGCCCAGCAAAAAGCTGCTTGCACCGT
TTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGG
GGAGACCTGGGCGGGTTCGATGCCGCAATGACAGCCGGGGAAGAGGAATT
TGTTAAGAGACGCATATACTTGCCCCTGGAAAGGGGACGCGATATCGCTT
TACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTGGATTTGACGAGCCC
AAGGAAGGACAGCCTCCTATCCGCCGCACACGGGTTCCCGTTGCCGAGTT
TGCAGCGGCATTAAGGATCGGTACTCATGCTGACGACCGGTCCCGCATAG
ACATTGATGAGGTTGAATGTCTGTTGTCGAACCTTATCTACAAGGCTGAA
GAGCATTTGTCGTACGCATGGAGGATGTGCAACAAACATGCCACAAAGAA
TAGAGAGGCACCGATCGAGGAATCGCGGAAATGGGGCATTTACGACACTA
CGAACCTGTTGTTCAAGACATACTTCAAGCTTAACACCGTTGGCCTCTCC
AAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACCTTCCTGGCTT
GGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTACTATGTCGGTG
TTATACACTTTCTGGATGAGAATTATGCCGAAATGTCCAATATCTTTGAT
GATTTCAAGGAAGGCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGCATC
TCTCTCCCCCGTCGCGACTGCGGAGTACCCCGACCGATTGAAGTCGTTCT
ATTACTTTTCTAACGCCGCACATGTCTCCGCCGACCTCCGATACTCGCTC
TTCCAGGCGAATGGCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTGGGT
CGATATCTTTACCGCTTATTGGAAAGCTGTGGGGGAGATTGTTCGATTTG
ACGACTCCCCAAGACATGCCAGTTGGGTGAAGGTGTTCGATGCTTGGAAG
GATACGGCAAATCAATTAATCAGGGGATACTCGACAGGCAGTTTGCAAGC
CTGGACAGTGCCATGCTTGTATTCTGTCGGGAGATATTTGCGGGCATTCG
CGATGAAGGCAGATGCTGAGCTTTCTGCCCAAGACTCCGTCACTTTCGAC
GATCGCTTCCAAGATGATGCGACGGATGCCAAGAATCCAAAGTTGGAGGA
AGCTACACGAGTGCTCAACAGAATGTTCACTTTGTGTCTAAGTGACCGGG
GTTGATGAAAGGATACATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCA
AAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAAATTGATTCTCACCTA
CCTCGTCCCCTGCCACCTCGTCACCACACATACCCTGCCCAGCAAAAAGC
TGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCGAC
TGCATCAAAAGGGGAGACCTGGGCGGGTTCGATGCCGCAATGACAGCCGG
GGAAGAGGAATTTGTTAAGAGACGCATATACTTGCCCCTGGAAAGGGGAC
GCGATATCGCTTTACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTGGA
TTTGACGAGCCCAAGGAAGGACAGCCTCCTATCCGCCGCACACGGGTTCC
CGTTGCCGAGTTTGCAGCGGCATTAAGGATCGGTACTCATGCTGACGACC
GGTCCCGCATAGACATTGATGAGGTTGAATGTCTGTTGTCGAACCTTATC
TACAAGGCTGAAGAGCATTTGTCGTACGCATGGAGGATGTGCAACAAACA
TGCCACAAAGAATAGAGAGGCACCGATCGAGGAATCGCGGAAATGGGGCA
TTTACGACACTACGAACCTGTTGTTCAAGACATACTTCAAGCTTAACACC
GTTGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGA
CCTTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGT
ACTATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAATGTCC
AATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGGTGCCCG
CCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCGACCGAT
TGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCCGACCTC
CGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCAAGAGCA
GAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGGGGGAGA
TTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAGGTGTTC
GATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTCGACAGG
CAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGAGATATT
TGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAAGACTCC
GTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAAGAATCC
AAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTTTGTGTC
TAAGTGACCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CSN12CAN33_40545Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40545-T1CAN33_40545-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40545-T1.cdsCAN33_40545-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40545-T1.exon5CAN33_40545-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_40545-T1.exon4CAN33_40545-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_40545-T1.exon3CAN33_40545-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40545-T1.exon2CAN33_40545-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40545-T1.exon1CAN33_40545-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
ProductCOP9 signalosome (CSN) subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2767461..2769030 -
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