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CAN33_40560-T1, CAN33_40560-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40560-T1
Unique NameCAN33_40560-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2774831..2776344+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40560-T1 ID=CAN33_40560-T1|Name=CAN33_40560-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1514bp|location=Sequence derived from alignment at NKJJ01000017.1:2774831..2776344+ (Aspergillus niger FDAARGOS_311)
ATGTCTCGCCGCGAAGATTCCAAGGCTAGGGATGACACTGTCACCGTTAA
TGTTGAAGACTTTACCCGCACTCGCGACAGTGTAAGTTACCTTTTTCTTT
TTCTGATGTATCGTTTGTTTCCGTCGTTTTGCCCTCCGGCGCGCGCGCGC
GGCCTGCCGACTGCCTCCCTCCCTTAAGCTACGGTGGACGGGCGCTGCGC
TGGCCTCCCACCCCCAAATTCACCACCACGCGTCCGTAAACAAAAGGCCG
CCCCGACGGGCTCAGCGCGACGCCGTTGGCTTTCATTTCCCCTCAACCCA
GCATTGTACTATCCCCTTGGTCTTCGCATTTGGATTGCTTCGCTTTATTT
CCCTTTCAGCTGGCTTTTCGGCTCTGATTTCCCTTTGTTTGCCCTCTCCT
TCGCTTCTGTAATCGCACCGCGCGTTTCCTTGGTTTCGCGCCAACGCCAT
TCCCCTTCCCAATGGCCCGGCGCGGACGCTCATCTCCAGAGCGGGCGCCT
TCAGCAGCGTCTGCCCCGGCGCTGGTGGCGCCCATCTCCCGTGCTACCGT
TGCCATCCATACCATCACTACTGGCATCCGCACCATTGCCACTGCTGCCC
CCAACAAGCCCCACTAATTCATTCTCAGGTTGTCTCTAGCCTAGTGCAGC
TGTCGGCGGCTGTCTCCGAGCTGACCAAGGCCTATCTCAACCATGCCGAT
ACTGTCCTGGGCCGCACCCCCACTGCTCTGGACATCAGCAGCATCACCGG
CATCACCAGCTCTCTGTATGAGTCTGGCCTGCTTGGTGCGCGTGCCACCA
GCCCTGGCGCCAAGTCCGAAGTGGGCGAGAAGAAGAAGCGCAAGCGTGCT
CCCCCGGACCCCAACGCTCCCAAGCGCGCCTTGACCCCCTTCTTCCTCTA
CATGCAGCACAACCGCTCCCGTATTGCTGAGGAGCTGGGCCCCAATGCTA
AGCCTAAGGAAGTCTCTGACGAGGGTACTCGCCGTTGGGCTGAGATGCCT
GAAGTCCAGAAGGAGGTACGTTGACATGCCCATTTGATTATAAAGAGCGC
CGTTGCTAACTCACGCGCAGGTCTGGAAGAAGCTGTATGCGGACAACCTT
GCTGTCTACAAGGAGAAGGTGAAGGCCTACAAGGCTGGCCTCCCTTACTC
GGACGATGCCAAGGCTGCCAGCCAGCTGCACCAGGGTATTGAGGGCGCCG
AGGCCACCGAGGCGTCTGAGGATGAGGAGCAGGAGTCCGAGGAAGAGTCC
GAGGAGGAGTCCTCTCCCGAGCCGGTCAAGGAGCCCACTCCCCCGCGCAG
CACCAAGCGCCGTCGTAGCGAGGGTAAGCCTGCTGCTAAGGAGGCACCGA
CCCCCAGCGAGAAGAAGAAGGAGTCCCCCGAGAAGAAGAAGCGTGGGGCC
GCTGCCCGGAAGGAGAAGGAGCAGGAAGAGACCCCTGCTCGCAAGGCTGC
GGGTGGCGAGAACAAGCGCGCCACCAAGAAGAAGCGCAAGAGCGAGGCCG
GTGCTGAGGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2774831..2776344+

>CAN33_40560-T1 ID=CAN33_40560-T1|Name=CAN33_40560-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3300bp|location=Sequence derived from alignment at NKJJ01000017.1:2774831..2776344+ (Aspergillus niger FDAARGOS_311)
ATGTCTCGCCGCGAAGATTCCAAGGCTAGGGATGACACTGTCACCGTTAA
TGTTGAAGACTTTACCCGCACTCGCGACAGTGTTGTCTCTAGCCTAGTGC
AGCTGTCGGCGGCTGTCTCCGAGCTGACCAAGGCCTATCTCAACCATGCC
GATACTGTCCTGGGCCGCACCCCCACTGCTCTGGACATCAGCAGCATCAC
CGGCATCACCAGCTCTCTGTATGAGTCTGGCCTGCTTGGTGCGCGTGCCA
CCAGCCCTGGCGCCAAGTCCGAAGTGGGCGAGAAGAAGAAGCGCAAGCGT
GCTCCCCCGGACCCCAACGCTCCCAAGCGCGCCTTGACCCCCTTCTTCCT
CTACATGCAGCACAACCGCTCCCGTATTGCTGAGGAGCTGGGCCCCAATG
CTAAGCCTAAGGAAGTCTCTGACGAGGGTACTCGCCGTTGGGCTGAGATG
CCTGAAGTCCAGAAGGAGGTCTGGAAGAAGCTGTATGCGGACAACCTTGC
TGTCTACAAGGAGAAGGTGAAGGCCTACAAGGCTGGCCTCCCTTACTCGG
ACGATGCCAAGGCTGCCAGCCAGCTGCACCAGGGTATTGAGGGCGCCGAG
GCCACCGAGGCCACCAAGCGCCGTCGTAGCGAGGGTAAGCCTGCTGCTAA
GGAGGCACCGACCCCCAGCGAGAAGAAGAAGGAGTCCCCCGAGAAGAAGA
AGCGTGGGGCCGCTGCCCGGAAGGAGAAGGAGCAGGAAGAGACCCCTGCT
CGCAAGGCTGCGGGTGGCGAGAACAAGCGCGCCACCAAGAAGAAGCGCAA
GAGCGAGGCCGGTGCTGAGGAGTAAATGTCTCGCCGCGAAGATTCCAAGG
CTAGGGATGACACTGTCACCGTTAATGTTGAAGACTTTACCCGCACTCGC
GACAGTGTTGTCTCTAGCCTAGTGCAGCTGTCGGCGGCTGTCTCCGAGCT
GACCAAGGCCTATCTCAACCATGCCGATACTGTCCTGGGCCGCACCCCCA
CTGCTCTGGACATCAGCAGCATCACCGGCATCACCAGCTCTCTGTATGAG
TCTGGCCTGCTTGGTGCGCGTGCCACCAGCCCTGGCGCCAAGTCCGAAGT
GGGCGAGAAGAAGAAGCGCAAGCGTGCTCCCCCGGACCCCAACGCTCCCA
AGCGCGCCTTGACCCCCTTCTTCCTCTACATGCAGCACAACCGCTCCCGT
ATTGCTGAGGAGCTGGGCCCCAATGCTAAGCCTAAGGAAGTCTCTGACGA
GGGTACTCGCCGTTGGGCTGAGATGCCTGAAGTCCAGAAGGAGGTCTGGA
AGAAGCTGTATGCGGACAACCTTGCTGTCTACAAGGAGAAGGTGAAGGCC
TACAAGGCTGGCCTCCCTTACTCGGACGATGCCAAGGCTGCCAGCCAGCT
GCACCAGGGTATTGAGGGCGCCGAGGCCACCGAGGCCACCAAGCGCCGTC
GTAGCGAGGGTAAGCCTGCTGCTAAGGAGGCACCGACCCCCAGCGAGAAG
AAGAAGGAGTCCCCCGAGAAGAAGAAGCGTGGGGCCGCTGCCCGGAAGGA
GAAGGAGCAGGAAGAGACCCCTGCTCGCAAGGCTGCGGGTGGCGAGAACA
AGCGCGCCACCAAGAAGAAGCGCAAGAGCGAGGCCGGTGCTGAGGAGTAA
ATGTCTCGCCGCGAAGATTCCAAGGCTAGGGATGACACTGTCACCGTTAA
TGTTGAAGACTTTACCCGCACTCGCGACAGTGTTGTCTCTAGCCTAGTGC
AGCTGTCGGCGGCTGTCTCCGAGCTGACCAAGGCCTATCTCAACCATGCC
GATACTGTCCTGGGCCGCACCCCCACTGCTCTGGACATCAGCAGCATCAC
CGGCATCACCAGCTCTCTGTATGAGTCTGGCCTGCTTGGTGCGCGTGCCA
CCAGCCCTGGCGCCAAGTCCGAAGTGGGCGAGAAGAAGAAGCGCAAGCGT
GCTCCCCCGGACCCCAACGCTCCCAAGCGCGCCTTGACCCCCTTCTTCCT
CTACATGCAGCACAACCGCTCCCGTATTGCTGAGGAGCTGGGCCCCAATG
CTAAGCCTAAGGAAGTCTCTGACGAGGGTACTCGCCGTTGGGCTGAGATG
CCTGAAGTCCAGAAGGAGGTCTGGAAGAAGCTGTATGCGGACAACCTTGC
TGTCTACAAGGAGAAGGTGAAGGCCTACAAGGCTGGCCTCCCTTACTCGG
ACGATGCCAAGGCTGCCAGCCAGCTGCACCAGGGTATTGAGGGCGCCGAG
GCCACCGAGGCCACCAAGCGCCGTCGTAGCGAGGGTAAGCCTGCTGCTAA
GGAGGCACCGACCCCCAGCGAGAAGAAGAAGGAGTCCCCCGAGAAGAAGA
AGCGTGGGGCCGCTGCCCGGAAGGAGAAGGAGCAGGAAGAGACCCCTGCT
CGCAAGGCTGCGGGTGGCGAGAACAAGCGCGCCACCAAGAAGAAGCGCAA
GAGCGAGGCCGGTGCTGAGGAGTAAATGTCTCGCCGCGAAGATTCCAAGG
CTAGGGATGACACTGTCACCGTTAATGTTGAAGACTTTACCCGCACTCGC
GACAGTGTTGTCTCTAGCCTAGTGCAGCTGTCGGCGGCTGTCTCCGAGCT
GACCAAGGCCTATCTCAACCATGCCGATACTGTCCTGGGCCGCACCCCCA
CTGCTCTGGACATCAGCAGCATCACCGGCATCACCAGCTCTCTGTATGAG
TCTGGCCTGCTTGGTGCGCGTGCCACCAGCCCTGGCGCCAAGTCCGAAGT
GGGCGAGAAGAAGAAGCGCAAGCGTGCTCCCCCGGACCCCAACGCTCCCA
AGCGCGCCTTGACCCCCTTCTTCCTCTACATGCAGCACAACCGCTCCCGT
ATTGCTGAGGAGCTGGGCCCCAATGCTAAGCCTAAGGAAGTCTCTGACGA
GGGTACTCGCCGTTGGGCTGAGATGCCTGAAGTCCAGAAGGAGGTCTGGA
AGAAGCTGTATGCGGACAACCTTGCTGTCTACAAGGAGAAGGTGAAGGCC
TACAAGGCTGGCCTCCCTTACTCGGACGATGCCAAGGCTGCCAGCCAGCT
GCACCAGGGTATTGAGGGCGCCGAGGCCACCGAGGCCACCAAGCGCCGTC
GTAGCGAGGGTAAGCCTGCTGCTAAGGAGGCACCGACCCCCAGCGAGAAG
AAGAAGGAGTCCCCCGAGAAGAAGAAGCGTGGGGCCGCTGCCCGGAAGGA
GAAGGAGCAGGAAGAGACCCCTGCTCGCAAGGCTGCGGGTGGCGAGAACA
AGCGCGCCACCAAGAAGAAGCGCAAGAGCGAGGCCGGTGCTGAGGAGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40560CAN33_40560Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40560-T1.exon1CAN33_40560-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_40560-T1.exon2CAN33_40560-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40560-T1.exon3CAN33_40560-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40560-T1.exon4CAN33_40560-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40560-T1.cdsCAN33_40560-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40560-T1CAN33_40560-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036910
DBxrefInterPro:IPR009071
DBxrefPFAM:PF09011
DBxrefPFAM:PF00505
ProductHMG (high mobility group) box family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2774831..2776344 +
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