You are here

Home

CAN33_40700-T1, CAN33_40700-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40700-T1
Unique NameCAN33_40700-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2854513..2855772-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40700-T1 ID=CAN33_40700-T1|Name=CAN33_40700-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1260bp|location=Sequence derived from alignment at NKJJ01000017.1:2854513..2855772- (Aspergillus niger FDAARGOS_311)
ATGGCCGGTCAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAG
CAAGGAGACTGTAAGGCAATCCGACCGACCTGTTTGTTGTATAGATAGGC
AATACTGATCAAGTTCATGAATTAACCAGCCTGCTCCTCCCGCTCAACTT
GTCGCCGCTCTCAGTGCTTTCTTGAGCGAATCTGGTTTCTCCAAGACCAA
GGAAGCTTTCACCAAAGAACTTGCCAGCAAGTCGATCGACTCTGATGCGA
AGAATGTGCCGTCCCTGCTTGAACTGTACCAATCCTGGGAAAAGTCCTCC
GAGAAGTCCTCCGGTTCTAGCTCTTCGGACAGCGACAGCGACAGTGAAAG
TGAGAGTGGAAGCGAGAGCGATAGCGAAAGCAGTGACAGCAGCTCCGACG
AATCCAGCGATTCTGATGTCGAGATGAACGACAAGTCCGAGTCCGACAGC
GATAGCGACTCCGATGACGAGGAGGAGAAGAAGAAGCCTGCTGCTCCTGC
TGCTAAGTCCCAGGGCACCAAGCGCAAGGCCGAGTCCAGCTCCTCCGAGT
CTGATTCCGAATCTGAGGCCGATGAGGCTCCCAAGTCGAAGAAGACCAAG
GTGACTTCCGCCATGGAAGAGTCTTCTGACTCGGACTCCTCCGACTCTGA
GTCCGATTCTTCCTCTTCCTCTTCCGAGTCTGAAGAGTCCTCCGACTCGG
ACTCCTCCAGCGACGACTCCTCCAGCTCCTCTTCTGAGTCCGATTCCGAC
TCCGATTCTGATTCGGACTCTGACTCTTCCTCTGACGACGAGGACGACAA
GAAGGACGACAAGAAGGCCGATAAGAAGGCACTGAAGGCTGCTACCAAGA
CCCCTCTGCCTCCGTCCGAATCTAGCTCCAGCGGCTCTTCCCCGTCTTCT
TCGTCCGACTCTGACACCACCGGAACCGTCAGCAACTCCGACTCTGCCCC
CAAAGAGCAGTCCAAGTCTGCCCAGACATCCTACTCCAGCAGCGCCAGCC
CTGCTCCCGGCAACGGCCCCCAGAAGAAGAAGCACACCGGTGCTCGCCCC
ACTCCTCTGGCTCAGCTGAGTGAGCTCCCCACCGACCACCTCCTCTCGAA
CGACTACGTTCCCTACGCCTACGCCGAGAAGGCCTGGCAGGATCTGTCGG
TCACCCGCGGCAAGGGCTTCACCAAGGAGAAGAACAAGAAGAAGCGCGGT
TCTTACCGCGGTGGTCCCATCGACATCTCGGGTGGCAAGTCCTTCAAGTT
CGATGACTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:2854513..2855772-

>CAN33_40700-T1 ID=CAN33_40700-T1|Name=CAN33_40700-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3660bp|location=Sequence derived from alignment at NKJJ01000017.1:2854513..2855772- (Aspergillus niger FDAARGOS_311)
GACGACAAGAAGGACGACAAGAAGGCCGATAAGAAGGCACTGAAGGCTGC
TACCAAGACCCCTCTGCCTCCGTCCGAATCTAGCTCCAGCGGCTCTTCCC
CGTCTTCTTCGTCCGACTCTGACACCACCGGAACCGTCAGCAACTCCGAC
TCTGCCCCCAAAGAGCAGTCCAAGTCTGCCCAGACATCCTACTCCAGCAG
CGCCAGCCCTGCTCCCGGCAACGGCCCCCAGAAGAAGAAGCACACCGGTG
CTCGCCCCACTCCTCTGGCTCAGCTGAGTGAGCTCCCCACCGACCACCTC
CTCTCGAACGACTACGTTCCCTACGCCTACGCCGAGAAGGCCTGGCAGGA
TCTGTCGGTCACCCGCGGCAAGGGCTTCACCAAGGAGAAGAACAAGAAGA
AGCGCGGTTCTTACCGCGGTGGTCCCATCGACATCTCGGGTGGCAAGTCC
TTCAAGTTCGATGACTAGCAGCTCCGACGAATCCAGCGATTCTGATGTCG
AGATGAACGACAAGTCCGAGTCCGACAGCGATAGCGACTCCGATGACGAG
GAGGAGAAGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCCCAGGGCACCAA
GCGCAAGGCCGAGTCCAGCTCCTCCGAGTCTGATTCCGAATCTGAGGCCG
ATGAGGCTCCCAAGTCGAAGAAGACCAAGCCTGCTCCTCCCGCTCAACTT
GTCGCCGCTCTCAGTGCTTTCTTGAGCGAATCTGGTTTCTCCAAGACCAA
GGAAGCTTTCACCAAAGAACTTGCCAGCAAGTCGATCGACTCTGATGCGA
AGAATGTGCCGTCCCTGCTTGAACTGTACCAATCCTGGGAAAAGTCCTCC
GAGAAATGGCCGGTCAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCC
AAGAGCAAGGAGACTGACGACAAGAAGGACGACAAGAAGGCCGATAAGAA
GGCACTGAAGGCTGCTACCAAGACCCCTCTGCCTCCGTCCGAATCTAGCT
CCAGCGGCTCTTCCCCGTCTTCTTCGTCCGACTCTGACACCACCGGAACC
GTCAGCAACTCCGACTCTGCCCCCAAAGAGCAGTCCAAGTCTGCCCAGAC
ATCCTACTCCAGCAGCGCCAGCCCTGCTCCCGGCAACGGCCCCCAGAAGA
AGAAGCACACCGGTGCTCGCCCCACTCCTCTGGCTCAGCTGAGTGAGCTC
CCCACCGACCACCTCCTCTCGAACGACTACGTTCCCTACGCCTACGCCGA
GAAGGCCTGGCAGGATCTGTCGGTCACCCGCGGCAAGGGCTTCACCAAGG
AGAAGAACAAGAAGAAGCGCGGTTCTTACCGCGGTGGTCCCATCGACATC
TCGGGTGGCAAGTCCTTCAAGTTCGATGACTAGCAGCTCCGACGAATCCA
GCGATTCTGATGTCGAGATGAACGACAAGTCCGAGTCCGACAGCGATAGC
GACTCCGATGACGAGGAGGAGAAGAAGAAGCCTGCTGCTCCTGCTGCTAA
GTCCCAGGGCACCAAGCGCAAGGCCGAGTCCAGCTCCTCCGAGTCTGATT
CCGAATCTGAGGCCGATGAGGCTCCCAAGTCGAAGAAGACCAAGCCTGCT
CCTCCCGCTCAACTTGTCGCCGCTCTCAGTGCTTTCTTGAGCGAATCTGG
TTTCTCCAAGACCAAGGAAGCTTTCACCAAAGAACTTGCCAGCAAGTCGA
TCGACTCTGATGCGAAGAATGTGCCGTCCCTGCTTGAACTGTACCAATCC
TGGGAAAAGTCCTCCGAGAAATGGCCGGTCAGAAGTCTAAGCAGGCGAAG
CCCGCCAAAGCGTCCAAGAGCAAGGAGACTGACGACAAGAAGGACGACAA
GAAGGCCGATAAGAAGGCACTGAAGGCTGCTACCAAGACCCCTCTGCCTC
CGTCCGAATCTAGCTCCAGCGGCTCTTCCCCGTCTTCTTCGTCCGACTCT
GACACCACCGGAACCGTCAGCAACTCCGACTCTGCCCCCAAAGAGCAGTC
CAAGTCTGCCCAGACATCCTACTCCAGCAGCGCCAGCCCTGCTCCCGGCA
ACGGCCCCCAGAAGAAGAAGCACACCGGTGCTCGCCCCACTCCTCTGGCT
CAGCTGAGTGAGCTCCCCACCGACCACCTCCTCTCGAACGACTACGTTCC
CTACGCCTACGCCGAGAAGGCCTGGCAGGATCTGTCGGTCACCCGCGGCA
AGGGCTTCACCAAGGAGAAGAACAAGAAGAAGCGCGGTTCTTACCGCGGT
GGTCCCATCGACATCTCGGGTGGCAAGTCCTTCAAGTTCGATGACTAGCA
GCTCCGACGAATCCAGCGATTCTGATGTCGAGATGAACGACAAGTCCGAG
TCCGACAGCGATAGCGACTCCGATGACGAGGAGGAGAAGAAGAAGCCTGC
TGCTCCTGCTGCTAAGTCCCAGGGCACCAAGCGCAAGGCCGAGTCCAGCT
CCTCCGAGTCTGATTCCGAATCTGAGGCCGATGAGGCTCCCAAGTCGAAG
AAGACCAAGCCTGCTCCTCCCGCTCAACTTGTCGCCGCTCTCAGTGCTTT
CTTGAGCGAATCTGGTTTCTCCAAGACCAAGGAAGCTTTCACCAAAGAAC
TTGCCAGCAAGTCGATCGACTCTGATGCGAAGAATGTGCCGTCCCTGCTT
GAACTGTACCAATCCTGGGAAAAGTCCTCCGAGAAATGGCCGGTCAGAAG
TCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAGCAAGGAGACTGACGA
CAAGAAGGACGACAAGAAGGCCGATAAGAAGGCACTGAAGGCTGCTACCA
AGACCCCTCTGCCTCCGTCCGAATCTAGCTCCAGCGGCTCTTCCCCGTCT
TCTTCGTCCGACTCTGACACCACCGGAACCGTCAGCAACTCCGACTCTGC
CCCCAAAGAGCAGTCCAAGTCTGCCCAGACATCCTACTCCAGCAGCGCCA
GCCCTGCTCCCGGCAACGGCCCCCAGAAGAAGAAGCACACCGGTGCTCGC
CCCACTCCTCTGGCTCAGCTGAGTGAGCTCCCCACCGACCACCTCCTCTC
GAACGACTACGTTCCCTACGCCTACGCCGAGAAGGCCTGGCAGGATCTGT
CGGTCACCCGCGGCAAGGGCTTCACCAAGGAGAAGAACAAGAAGAAGCGC
GGTTCTTACCGCGGTGGTCCCATCGACATCTCGGGTGGCAAGTCCTTCAA
GTTCGATGACTAGCAGCTCCGACGAATCCAGCGATTCTGATGTCGAGATG
AACGACAAGTCCGAGTCCGACAGCGATAGCGACTCCGATGACGAGGAGGA
GAAGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCCCAGGGCACCAAGCGCA
AGGCCGAGTCCAGCTCCTCCGAGTCTGATTCCGAATCTGAGGCCGATGAG
GCTCCCAAGTCGAAGAAGACCAAGCCTGCTCCTCCCGCTCAACTTGTCGC
CGCTCTCAGTGCTTTCTTGAGCGAATCTGGTTTCTCCAAGACCAAGGAAG
CTTTCACCAAAGAACTTGCCAGCAAGTCGATCGACTCTGATGCGAAGAAT
GTGCCGTCCCTGCTTGAACTGTACCAATCCTGGGAAAAGTCCTCCGAGAA
ATGGCCGGTCAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAG
CAAGGAGACT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40700CAN33_40700Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40700-T1CAN33_40700-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40700-T1.cdsCAN33_40700-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40700-T1.exon4CAN33_40700-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_40700-T1.exon3CAN33_40700-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40700-T1.exon2CAN33_40700-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40700-T1.exon1CAN33_40700-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007718
DBxrefPFAM:PF05022
ProductSRP40 C-terminal domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2854513..2855772 -
Powered by Drupal