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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2858097..2859071+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40710-T1 ID=CAN33_40710-T1|Name=CAN33_40710-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=975bp|location=Sequence derived from alignment at NKJJ01000017.1:2858097..2859071+ (Aspergillus niger FDAARGOS_311)
ATGTCCTATTCGCGAAGCATCCTCATCACCGGAGGTACCGCCGGTCTGGG
CTATTACTGCACCATAGAACTCGCCCGCCAGTTCCCCGATTATCAAATTA
TAATTGCATCTCGATCTGACTCTCGAGATGCTGTCGGATCTATAAACAAA
CTCCTGGGCCAAAGCAACGTCAGCTACTTCCGACTCGATCTTTCCGACTT
ATCCAAGGTCCGATCCTTCGTCCAGCAATGGGAAACCAACAAATACCCTC
CCATCCAATACCTACTCCTCAATGCAGGCCTACAGTTTCCCGGTCCAGTT
GAGTACACAGTAGACGGATACGAAAAAACCTTCGCCATCAATCACATCGG
CCACGCCCTTCTATTTTCACTCCTGGTTCCTCACCTCGCCAACACAGCAA
GGATAGTGGTAACCTCCAGCGGCACACATGATCCTGCACAAGAGACCGGC
CTCCCCGACGCAAAGTACACCAGTGCGGAGGATCTCGCTCACCCGACAAA
GAGCTCAGCCCAGAATCCCGGTCGCCAGCGTTACTCAACCAGCAAGCTTG
CAAACGTTCTTTGGGTGTACGCGCTACATCGGCGTCTCAGTGAGTCGAAA
GATGCGAGGCTTAAGTCGTGGACTGTTGTTGCGTTTGATCCTGGTCTCAT
GCCTGGGACTGGGCTCGTCCGTGAAGCGAACCCCGTCTTGCGCTTTCTCT
GGCATGTGATTTTCCCTCGCGTCATTCCGCTTTTGCGTGTGATGCTGGGA
ACACCGAATATCAGGCTGCCGCAGGCGTCTGGGGCTAATCTGGCTTGGCT
GGCGAGTGGTAAGGAGGCTTTGTCGAGTAGTGGAGTCTATTATGAGGGGC
GGAAGCAGATCCGCTCCAGCGAAGAGAGTTATGATGTGAGCAAGCAGGAC
GACCTGTGGGATTGGACTGTGCGGAATGTTGCCTCTACGGCAGATGAAGC
CGCGCGGTTTTCGTTGAATGATTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2858097..2859071+ >CAN33_40710-T1 ID=CAN33_40710-T1|Name=CAN33_40710-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=975bp|location=Sequence derived from alignment at NKJJ01000017.1:2858097..2859071+ (Aspergillus niger FDAARGOS_311)
ATGTCCTATTCGCGAAGCATCCTCATCACCGGAGGTACCGCCGGTCTGGG
CTATTACTGCACCATAGAACTCGCCCGCCAGTTCCCCGATTATCAAATTA
TAATTGCATCTCGATCTGACTCTCGAGATGCTGTCGGATCTATAAACAAA
CTCCTGGGCCAAAGCAACGTCAGCTACTTCCGACTCGATCTTTCCGACTT
ATCCAAGGTCCGATCCTTCGTCCAGCAATGGGAAACCAACAAATACCCTC
CCATCCAATACCTACTCCTCAATGCAGGCCTACAGTTTCCCGGTCCAGTT
GAGTACACAGTAGACGGATACGAAAAAACCTTCGCCATCAATCACATCGG
CCACGCCCTTCTATTTTCACTCCTGGTTCCTCACCTCGCCAACACAGCAA
GGATAGTGGTAACCTCCAGCGGCACACATGATCCTGCACAAGAGACCGGC
CTCCCCGACGCAAAGTACACCAGTGCGGAGGATCTCGCTCACCCGACAAA
GAGCTCAGCCCAGAATCCCGGTCGCCAGCGTTACTCAACCAGCAAGCTTG
CAAACGTTCTTTGGGTGTACGCGCTACATCGGCGTCTCAGTGAGTCGAAA
GATGCGAGGCTTAAGTCGTGGACTGTTGTTGCGTTTGATCCTGGTCTCAT
GCCTGGGACTGGGCTCGTCCGTGAAGCGAACCCCGTCTTGCGCTTTCTCT
GGCATGTGATTTTCCCTCGCGTCATTCCGCTTTTGCGTGTGATGCTGGGA
ACACCGAATATCAGGCTGCCGCAGGCGTCTGGGGCTAATCTGGCTTGGCT
GGCGAGTGGTAAGGAGGCTTTGTCGAGTAGTGGAGTCTATTATGAGGGGC
GGAAGCAGATCCGCTCCAGCGAAGAGAGTTATGATGTGAGCAAGCAGGAC
GACCTGTGGGATTGGACTGTGCGGAATGTTGCCTCTACGGCAGATGAAGC
CGCGCGGTTTTCGTTGAATGATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2858097..2859071 + |
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