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CAN33_40735-T1, CAN33_40735-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40735-T1
Unique NameCAN33_40735-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2878029..2880215-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40735-T1 ID=CAN33_40735-T1|Name=CAN33_40735-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2187bp|location=Sequence derived from alignment at NKJJ01000017.1:2878029..2880215- (Aspergillus niger FDAARGOS_311)
ATGGCACCAGACCGCTCCAACATCTCCTTCACCATCACCCACATGAACGC
CAACCACCAAGACTCCCTAGCAGCCTATCTCCAAGTCTACTGCCACGTCT
CCGCCCGCGAAGCCAAATCCGCTCGTCTCGAAGACATCACCTTATCTGAT
CTAGTCATCAGCGCCAATGGCACACGCTACACTGTCCCCATCGATCCAGC
AATGGGAAGTTTCTCCGAGTCGCGATCCCGTCTGGTAGCCATGCACCAGG
AATGTCTTGCGCGATTGGGCCGGTCCGACATCACCATCAAAGAGTATCGT
CGGCCAGAGGGAATCGAGATCTTCCTCTTTTTCGTGTTTGCAACTGCATT
GGTGGCGTTCTCTCGGCGCAGTAACTTCCTGCCTGGGTCGTTGTTCTACG
AAACGGTTGGACTGGGTGCGGTTCCGCCACTGGCGCAACTGTTCTACAAG
ACACAGCCGTTTGTGCTTACGGTTATGGCCGGGTCGCATGTGGTGGAGGC
GAGTTTGTTCACGGTGAAGAGGTTGAAGCGGCATGGGGTGCCGGTATTGT
CGTTGGTGTGGTGCGCTTGGGTGGTGTCGAATTTGATTGAGGGGTATACG
GTGTGGAGGAGGTTTGATTGGGTGGTGAGGCAGGAAGGGGCGAAGAGGGA
GCATGGGAAATAGTCATCTAGCATAGGTAGATACAATTCTACTATAATAT
ACTACAGAGTACGAATCAAACCATAAATGTTGCTCTCCATTCGACTGCTC
CATATTATTGCTGATAGTGGCTTATCGCTTATCGGCTAGCGGACAATCGA
CTAGCGGCTTACTCATCAAATCACGGGACCACGCTAAACCAATCCCAGAC
TAGGGTAGTAGGGCAACTTCCACAAGCGAGCCACAGTGCGAAATTCAACG
GAAGCCGACGACAAGCACTCAACTCCTTACGACCAACCCAACGACCCTTG
CCCGCTGCGTTCCTGGTGAAGGGCTGCAGGATTAGAGGTGAGTTTGTTGC
AATTAATCCGTCGTGATTTCGATCCCTCTCGATTTTTCCCGCGTCGTCGA
CGGTCGGTGTGCGCGTGCAATCTACGATCGGTCTCGAACTTGAATTGGAA
GATACACATTCCGGGGTATATCGAAGAGGAAGAGAGAAAAAGAAGAAAGA
TTATCAGAGCAGTTGTTTGGTGCAAGGGAATATAAGCGGCGGCGACGACG
ACGATTGAAAAGAAAGAACAACTCAAGAAAGAATTTTTTTCTTCGCTTTC
TCGTCCATACCCGAGTTCGCACACATTTCCAGCATCGAGCATCGCCACAC
ACACACAACACCATTCAATTCAATTCAAATCGACTCGACAATCGCACGAA
CAAACCTAAGACCATCGACGCATCGGGGCAAAAATTTCTCGAAGAGGGAT
TGACAATCACCGACAACAGTCTACTGCTTATTGCTACTGTCTTTTGTGGC
GAGCAATCCCCGCTAATACTTCTGCCATCTACAGTCCCTCGAACAGCAAA
CATGGGTATCTCACGCGACTCTCGTCACAAGCGCTCGGCTACCGGCGCGA
AGAGGGCCACCTACCGCAAGAAGAGGTATGCATGAGTTCCTATTGTCTTT
CTTACTCAACCAACTACACTACGAAAGAAACAACGACTGACGCACGGCAA
TTCAACAGGGCGTTCGAGAAGGGTCGCCAGCCCTCCAACACCCGTATCGG
AACCAAGAGAATCCACCTGGTCCGCACCCGTGGTGGTAACCAGAAGTTCC
GTGCCCTTCGTCTCGAATCCGGCAACTTCTCGTGGGGTTCTGAGGGTATC
TCCCGCAAGACCCGTGTCATCGTTGTGGCCTACCACCCCTCCAACAACGA
ACTGGTCCGCACCAACACCCTGACCAAGTCGGCCGTCGTTCAGATCGATG
CTGCTCCTTTCCGTCAATGGTACGAGGCCCACTACGGCCAGCCTATCGGC
CGCCGTCGCCAGCAGAAGACCGAGACCACCGAGGAGAAGAAGTCCAACAG
CGTTGTGAAGAAGCAGGCTGCTCGCTTTGCTGAGCAGGGCAAGGTCGAGT
CTGCCGTCGAGCGTCAGTTCGAGTCCGGACGTCTGTACGCTGTTGTGTCG
TCCCGCCCCGGCCAGAGCGGCCGCGTGGACGGATACATCCTGGAGGGTGA
GGAGCTGGCTTTCTACCAGCGTGCTATCCGCAAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2878029..2880215-

>CAN33_40735-T1 ID=CAN33_40735-T1|Name=CAN33_40735-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3366bp|location=Sequence derived from alignment at NKJJ01000017.1:2878029..2880215- (Aspergillus niger FDAARGOS_311)
GGCGTTCGAGAAGGGTCGCCAGCCCTCCAACACCCGTATCGGAACCAAGA
GAATCCACCTGGTCCGCACCCGTGGTGGTAACCAGAAGTTCCGTGCCCTT
CGTCTCGAATCCGGCAACTTCTCGTGGGGTTCTGAGGGTATCTCCCGCAA
GACCCGTGTCATCGTTGTGGCCTACCACCCCTCCAACAACGAACTGGTCC
GCACCAACACCCTGACCAAGTCGGCCGTCGTTCAGATCGATGCTGCTCCT
TTCCGTCAATGGTACGAGGCCCACTACGGCCAGCCTATCGGCCGCCGTCG
CCAGCAGAAGACCGAGACCACCGAGGAGAAGAAGTCCAACAGCGTTGTGA
AGAAGCAGGCTGCTCGCTTTGCTGAGCAGGGCAAGGTCGAGTCTGCCGTC
GAGCGTCAGTTCGAGTCCGGACGTCTGTACGCTGTTGTGTCGTCCCGCCC
CGGCCAGAGCGGCCGCGTGGACGGATACATCCTGGAGGGTGAGGAGCTGG
CTTTCTACCAGCGTGCTATCCGCAAGTAATCCCTCGAACAGCAAACATGG
GTATCTCACGCGACTCTCGTCACAAGCGCTCGGCTACCGGCGCGAAGAGG
GCCACCTACCGCAAGAAGAGATGGCACCAGACCGCTCCAACATCTCCTTC
ACCATCACCCACATGAACGCCAACCACCAAGACTCCCTAGCAGCCTATCT
CCAAGTCTACTGCCACGTCTCCGCCCGCGAAGCCAAATCCGCTCGTCTCG
AAGACATCACCTTATCTGATCTAGTCATCAGCGCCAATGGCACACGCTAC
ACTGTCCCCATCGATCCAGCAATGGGAAGTTTCTCCGAGTCGCGATCCCG
TCTGGTAGCCATGCACCAGGAATGTCTTGCGCGATTGGGCCGGTCCGACA
TCACCATCAAAGAGTATCGTCGGCCAGAGGGAATCGAGATCTTCCTCTTT
TTCGTGTTTGCAACTGCATTGGTGGCGTTCTCTCGGCGCAGTAACTTCCT
GCCTGGGTCGTTGTTCTACGAAACGGTTGGACTGGGTGCGGTTCCGCCAC
TGGCGCAACTGTTCTACAAGACACAGCCGTTTGTGCTTACGGTTATGGCC
GGGTCGCATGTGGTGGAGGCGAGGCGTTCGAGAAGGGTCGCCAGCCCTCC
AACACCCGTATCGGAACCAAGAGAATCCACCTGGTCCGCACCCGTGGTGG
TAACCAGAAGTTCCGTGCCCTTCGTCTCGAATCCGGCAACTTCTCGTGGG
GTTCTGAGGGTATCTCCCGCAAGACCCGTGTCATCGTTGTGGCCTACCAC
CCCTCCAACAACGAACTGGTCCGCACCAACACCCTGACCAAGTCGGCCGT
CGTTCAGATCGATGCTGCTCCTTTCCGTCAATGGTACGAGGCCCACTACG
GCCAGCCTATCGGCCGCCGTCGCCAGCAGAAGACCGAGACCACCGAGGAG
AAGAAGTCCAACAGCGTTGTGAAGAAGCAGGCTGCTCGCTTTGCTGAGCA
GGGCAAGGTCGAGTCTGCCGTCGAGCGTCAGTTCGAGTCCGGACGTCTGT
ACGCTGTTGTGTCGTCCCGCCCCGGCCAGAGCGGCCGCGTGGACGGATAC
ATCCTGGAGGGTGAGGAGCTGGCTTTCTACCAGCGTGCTATCCGCAAGTA
ATCCCTCGAACAGCAAACATGGGTATCTCACGCGACTCTCGTCACAAGCG
CTCGGCTACCGGCGCGAAGAGGGCCACCTACCGCAAGAAGAGATGGCACC
AGACCGCTCCAACATCTCCTTCACCATCACCCACATGAACGCCAACCACC
AAGACTCCCTAGCAGCCTATCTCCAAGTCTACTGCCACGTCTCCGCCCGC
GAAGCCAAATCCGCTCGTCTCGAAGACATCACCTTATCTGATCTAGTCAT
CAGCGCCAATGGCACACGCTACACTGTCCCCATCGATCCAGCAATGGGAA
GTTTCTCCGAGTCGCGATCCCGTCTGGTAGCCATGCACCAGGAATGTCTT
GCGCGATTGGGCCGGTCCGACATCACCATCAAAGAGTATCGTCGGCCAGA
GGGAATCGAGATCTTCCTCTTTTTCGTGTTTGCAACTGCATTGGTGGCGT
TCTCTCGGCGCAGTAACTTCCTGCCTGGGTCGTTGTTCTACGAAACGGTT
GGACTGGGTGCGGTTCCGCCACTGGCGCAACTGTTCTACAAGACACAGCC
GTTTGTGCTTACGGTTATGGCCGGGTCGCATGTGGTGGAGGCGAGGCGTT
CGAGAAGGGTCGCCAGCCCTCCAACACCCGTATCGGAACCAAGAGAATCC
ACCTGGTCCGCACCCGTGGTGGTAACCAGAAGTTCCGTGCCCTTCGTCTC
GAATCCGGCAACTTCTCGTGGGGTTCTGAGGGTATCTCCCGCAAGACCCG
TGTCATCGTTGTGGCCTACCACCCCTCCAACAACGAACTGGTCCGCACCA
ACACCCTGACCAAGTCGGCCGTCGTTCAGATCGATGCTGCTCCTTTCCGT
CAATGGTACGAGGCCCACTACGGCCAGCCTATCGGCCGCCGTCGCCAGCA
GAAGACCGAGACCACCGAGGAGAAGAAGTCCAACAGCGTTGTGAAGAAGC
AGGCTGCTCGCTTTGCTGAGCAGGGCAAGGTCGAGTCTGCCGTCGAGCGT
CAGTTCGAGTCCGGACGTCTGTACGCTGTTGTGTCGTCCCGCCCCGGCCA
GAGCGGCCGCGTGGACGGATACATCCTGGAGGGTGAGGAGCTGGCTTTCT
ACCAGCGTGCTATCCGCAAGTAATCCCTCGAACAGCAAACATGGGTATCT
CACGCGACTCTCGTCACAAGCGCTCGGCTACCGGCGCGAAGAGGGCCACC
TACCGCAAGAAGAGATGGCACCAGACCGCTCCAACATCTCCTTCACCATC
ACCCACATGAACGCCAACCACCAAGACTCCCTAGCAGCCTATCTCCAAGT
CTACTGCCACGTCTCCGCCCGCGAAGCCAAATCCGCTCGTCTCGAAGACA
TCACCTTATCTGATCTAGTCATCAGCGCCAATGGCACACGCTACACTGTC
CCCATCGATCCAGCAATGGGAAGTTTCTCCGAGTCGCGATCCCGTCTGGT
AGCCATGCACCAGGAATGTCTTGCGCGATTGGGCCGGTCCGACATCACCA
TCAAAGAGTATCGTCGGCCAGAGGGAATCGAGATCTTCCTCTTTTTCGTG
TTTGCAACTGCATTGGTGGCGTTCTCTCGGCGCAGTAACTTCCTGCCTGG
GTCGTTGTTCTACGAAACGGTTGGACTGGGTGCGGTTCCGCCACTGGCGC
AACTGTTCTACAAGACACAGCCGTTTGTGCTTACGGTTATGGCCGGGTCG
CATGTGGTGGAGGCGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40735CAN33_40735Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40735-T1CAN33_40735-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40735-T1.cdsCAN33_40735-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40735-T1.exon3CAN33_40735-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40735-T1.exon2CAN33_40735-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40735-T1.exon1CAN33_40735-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR037119
DBxrefInterPro:IPR001047
DBxrefInterPro:IPR022309
DBxrefInterPro:IPR019595
DBxrefPFAM:PF01201
DBxrefPFAM:PF10615
Productribosomal protein S8.e
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2878029..2880215 -
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