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CAN33_40775-T1, CAN33_40775-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40775-T1
Unique NameCAN33_40775-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2913708..2916065+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40775-T1 ID=CAN33_40775-T1|Name=CAN33_40775-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2358bp|location=Sequence derived from alignment at NKJJ01000017.1:2913708..2916065+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCCGACGTCTCTACCACCCCCGCCGCCGAGAACGTCAACGGCGC
CGCTGAGGCCAGCCCTGCTCCTGCTGCTGCTGCCCCCAGTGCCACCACCC
CCGAGGTCACTGCCGTTGAGAACTCTACTCCGGCTCCCGCTGCCAACCAG
CCTCACTCGGCTTCCCTCTATGTCGGTGAACTCGACCCCTCGGTGACCGA
GGCCATGCTCTACGAGCTCTTCTCTTCCATCGGCCAGGTTGCCTCCATCC
GTGTCTGCCGTGATGCCGTCACCAGACGCTCTCTTGGATACGCCTACGTT
AACTACAACAACACCGCCGATGGTGAGCGTGCTCTGGAAGACCTCAACTA
CACTCTGATCAAGGGCAAGCCCTGCCGTATCATGTGGTCCCAGCGTGACC
CCGCTCTCCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACCTGGAC
AGCGCCATTGACAACAAGGCTCTCCACGACACCTTCGCTGCCTTCGGCAA
CATCCTCAGCTGCAAGGTCGCTCAGGATGAGTTCGGCAACTCCAAGGGAT
ACGGTTTCGTCCACTACGAGACTGCTGAGGCTGCCAACAACGCCATCAAG
CACGTCAACGGCATGCTGTTGAACGACAAGAAGGTCTTCGTCGGCCACCA
CATCTCCAAGAAGGACCGCCAGAGCAAGTTCGAGGAGATGAAGGCCAACT
TCACCAACGTCTACATCAAGAACCTCGACTCTGAGATCGATGACGATGAG
TTCCGCAAGATGTTCGAGAAGTTCGGTGAGATCACCTCCGCCACCCTCAG
CCGTGACCAGGAGGGCAAGAGCCGTGGCTTCGGTTTTGTCAACTTCTCTA
CCCACGAGAGCGCGCAGGCCGCCGTCGAGGAGATGAACGACAAGGAGATC
CGCAGCCAGAAGCTCTACGTCGGTCGTGCCCAGAAGAAGCACGAGCGTGA
GGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGGCTTCCA
AGTACCAGGGTGTCAACCTCTACGTGAAGAACCTGACCGATGACATTGAT
GATGAGAAGCTCCGTGAGCTCTTCGGACCTTACGGCACCATCACCTCTGC
CAAGGTTATGCGCGACACCAACGTCGAGCGCGACCAGTCTCCCGACTCTG
CTGGTAAGGAGAAGGAGGCTGACAAGGAGAACGACAAGGAGGCCACCCCT
GAGGCTGAGAAGGCTGAGAAGGCCGAGGAGAAGCCCAGCGAGTCCTCCGA
GGAGAAGGACAAGGAGGCCAAGAAGTCTGACAAGAAGCCCTTCGGTAAGA
GCAAGGGTTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGAGGCTTCCAAG
GCCGTTACCGAGATGAACCAGAGAATGGTCAACGGCAAGCCCCTCTACGT
TGCCCTTGCCCAGCGCAAGGATGTCCGCCGCAGCCAGCTCGAGGCTAGCA
TCCAGGCTCGCAACACCATCAGACAGCAGCAGGCCGCCGCTGCCGCTGGT
ATGCCCCAGCCTTACATGCAGCCCGCTGTCTTCTACGGCCCCGGCCAGCA
GGGCTTCATCCCTGGTGGTCAGCGCGGCATGGCCTTCCCCCCTCAGCCCG
GTATGGTGATGGGTATCCCCGGTGGACGCCCCGGCCAGTACCCCGGTCCC
TTCCCCGGCCAGCAGGGTGGTCGCGGCATGGGCCCCAACCAGCAGATTCC
CCCCAACTTTGCTCAGGGTATCCCCATGGGCATGCAGGGCCCTGGTGGCA
TCCCTAACGGCATGGGATACCCCCAGATGGCTCAGGTGCAGTTCGGACGC
GGCGCTGGTGGCCGTGGTCAGGTCCCCGGAATGCCCATGGGTCAGGGTAT
GCGTGGCGGTCCCGGTTACGGTCAGGGCCGTGGTGCTCCTGTTCAGCAGG
GTCAGATGCGCCCTGGCCAGGGTGGTCGCGGACAGAACGCTGCTGCGCCC
GCTGGTCCTCAGGAGGGTGCCGCTGGTGGTGTTAACGCTCAGACTCTGGG
TGCCGCTCCCCCGGCCCAGCAGAAGCAGATGCTCGGCGAGGCTCTCTACC
CCAAGATCCAGGCCCAGCAGCCTGAGCTGGCTGGTAAGATCACTGGTATG
CTTCTGGAGATGGACAACACCGAGTTGCTCAGCCTGTGAGTTTTTTTCCC
TTCTGCTCCATTTGACTGTCAGTTCTTGTTGCTAATATATTATTGTAGGC
TTGAGGACGAGGAAGCCCTGCGCGCCAAGGTCGATGAGGCCCTTAGCGTT
TACGATGAGTACATGAAGAACAAGGGCACCGAGTCCGAGGCTCCTGCCGC
TGAGGCTGCCAAGCCCGAGGCGGAGAAGGAGGCCTCGACCGAGGAGAACA
AGGCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2913708..2916065+

>CAN33_40775-T1 ID=CAN33_40775-T1|Name=CAN33_40775-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4590bp|location=Sequence derived from alignment at NKJJ01000017.1:2913708..2916065+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCCGACGTCTCTACCACCCCCGCCGCCGAGAACGTCAACGGCGC
CGCTGAGGCCAGCCCTGCTCCTGCTGCTGCTGCCCCCAGTGCCACCACCC
CCGAGGTCACTGCCGTTGAGAACTCTACTCCGGCTCCCGCTGCCAACCAG
CCTCACTCGGCTTCCCTCTATGTCGGTGAACTCGACCCCTCGGTGACCGA
GGCCATGCTCTACGAGCTCTTCTCTTCCATCGGCCAGGTTGCCTCCATCC
GTGTCTGCCGTGATGCCGTCACCAGACGCTCTCTTGGATACGCCTACGTT
AACTACAACAACACCGCCGATGGTGAGCGTGCTCTGGAAGACCTCAACTA
CACTCTGATCAAGGGCAAGCCCTGCCGTATCATGTGGTCCCAGCGTGACC
CCGCTCTCCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACCTGGAC
AGCGCCATTGACAACAAGGCTCTCCACGACACCTTCGCTGCCTTCGGCAA
CATCCTCAGCTGCAAGGTCGCTCAGGATGAGTTCGGCAACTCCAAGGGAT
ACGGTTTCGTCCACTACGAGACTGCTGAGGCTGCCAACAACGCCATCAAG
CACGTCAACGGCATGCTGTTGAACGACAAGAAGGTCTTCGTCGGCCACCA
CATCTCCAAGAAGGACCGCCAGAGCAAGTTCGAGGAGATGAAGGCCAACT
TCACCAACGTCTACATCAAGAACCTCGACTCTGAGATCGATGACGATGAG
TTCCGCAAGATGTTCGAGAAGTTCGGTGAGATCACCTCCGCCACCCTCAG
CCGTGACCAGGAGGGCAAGAGCCGTGGCTTCGGTTTTGTCAACTTCTCTA
CCCACGAGAGCGCGCAGGCCGCCGTCGAGGAGATGAACGACAAGGAGATC
CGCAGCCAGAAGCTCTACGTCGGTCGTGCCCAGAAGAAGCACGAGCGTGA
GGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGGCTTCCA
AGTACCAGGGTGTCAACCTCTACGTGAAGAACCTGACCGATGACATTGAT
GATGAGAAGCTCCGTGAGCTCTTCGGACCTTACGGCACCATCACCTCTGC
CAAGGTTATGCGCGACACCAACGTCGAGCGCGACCAGTCTCCCGACTCTG
CTGGTAAGGAGAAGGAGGCTGACAAGGAGAACGACAAGGAGGCCACCCCT
GAGGCTGAGAAGGCTGAGAAGGCCGAGGAGAAGCCCAGCGAGTCCTCCGA
GGAGAAGGACAAGGAGGCCAAGAAGTCTGACAAGAAGCCCTTCGGTAAGA
GCAAGGGTTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGAGGCTTCCAAG
GCCGTTACCGAGATGAACCAGAGAATGGTCAACGGCAAGCCCCTCTACGT
TGCCCTTGCCCAGCGCAAGGATGTCCGCCGCAGCCAGCTCGAGGCTAGCA
TCCAGGCTCGCAACACCATCAGACAGCAGCAGGCCGCCGCTGCCGCTGGT
ATGCCCCAGCCTTACATGCAGCCCGCTGTCTTCTACGGCCCCGGCCAGCA
GGGCTTCATCCCTGGTGGTCAGCGCGGCATGGCCTTCCCCCCTCAGCCCG
GTATGGTGATGGGTATCCCCGGTGGACGCCCCGGCCAGTACCCCGGTCCC
TTCCCCGGCCAGCAGGGTGGTCGCGGCATGGGCCCCAACCAGCAGATTCC
CCCCAACTTTGCTCAGGGTATCCCCATGGGCATGCAGGGCCCTGGTGGCA
TCCCTAACGGCATGGGATACCCCCAGATGGCTCAGGTGCAGTTCGGACGC
GGCGCTGGTGGCCGTGGTCAGGTCCCCGGAATGCCCATGGGTCAGGGTAT
GCGTGGCGGTCCCGGTTACGGTCAGGGCCGTGGTGCTCCTGTTCAGCAGG
GTCAGATGCGCCCTGGCCAGGGTGGTCGCGGACAGAACGCTGCTGCGCCC
GCTGGTCCTCAGGAGGGTGCCGCTGGTGGTGTTAACGCTCAGACTCTGGG
TGCCGCTCCCCCGGCCCAGCAGAAGCAGATGCTCGGCGAGGCTCTCTACC
CCAAGATCCAGGCCCAGCAGCCTGAGCTGGCTGGTAAGATCACTGGTATG
CTTCTGGAGATGGACAACACCGAGTTGCTCAGCCTGCTTGAGGACGAGGA
AGCCCTGCGCGCCAAGGTCGATGAGGCCCTTAGCGTTTACGATGAGTACA
TGAAGAACAAGGGCACCGAGTCCGAGGCTCCTGCCGCTGAGGCTGCCAAG
CCCGAGGCGGAGAAGGAGGCCTCGACCGAGGAGAACAAGGCGTAAATGTC
TGCCGACGTCTCTACCACCCCCGCCGCCGAGAACGTCAACGGCGCCGCTG
AGGCCAGCCCTGCTCCTGCTGCTGCTGCCCCCAGTGCCACCACCCCCGAG
GTCACTGCCGTTGAGAACTCTACTCCGGCTCCCGCTGCCAACCAGCCTCA
CTCGGCTTCCCTCTATGTCGGTGAACTCGACCCCTCGGTGACCGAGGCCA
TGCTCTACGAGCTCTTCTCTTCCATCGGCCAGGTTGCCTCCATCCGTGTC
TGCCGTGATGCCGTCACCAGACGCTCTCTTGGATACGCCTACGTTAACTA
CAACAACACCGCCGATGGTGAGCGTGCTCTGGAAGACCTCAACTACACTC
TGATCAAGGGCAAGCCCTGCCGTATCATGTGGTCCCAGCGTGACCCCGCT
CTCCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACCTGGACAGCGC
CATTGACAACAAGGCTCTCCACGACACCTTCGCTGCCTTCGGCAACATCC
TCAGCTGCAAGGTCGCTCAGGATGAGTTCGGCAACTCCAAGGGATACGGT
TTCGTCCACTACGAGACTGCTGAGGCTGCCAACAACGCCATCAAGCACGT
CAACGGCATGCTGTTGAACGACAAGAAGGTCTTCGTCGGCCACCACATCT
CCAAGAAGGACCGCCAGAGCAAGTTCGAGGAGATGAAGGCCAACTTCACC
AACGTCTACATCAAGAACCTCGACTCTGAGATCGATGACGATGAGTTCCG
CAAGATGTTCGAGAAGTTCGGTGAGATCACCTCCGCCACCCTCAGCCGTG
ACCAGGAGGGCAAGAGCCGTGGCTTCGGTTTTGTCAACTTCTCTACCCAC
GAGAGCGCGCAGGCCGCCGTCGAGGAGATGAACGACAAGGAGATCCGCAG
CCAGAAGCTCTACGTCGGTCGTGCCCAGAAGAAGCACGAGCGTGAGGAGG
AGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGGCTTCCAAGTAC
CAGGGTGTCAACCTCTACGTGAAGAACCTGACCGATGACATTGATGATGA
GAAGCTCCGTGAGCTCTTCGGACCTTACGGCACCATCACCTCTGCCAAGG
TTATGCGCGACACCAACGTCGAGCGCGACCAGTCTCCCGACTCTGCTGGT
AAGGAGAAGGAGGCTGACAAGGAGAACGACAAGGAGGCCACCCCTGAGGC
TGAGAAGGCTGAGAAGGCCGAGGAGAAGCCCAGCGAGTCCTCCGAGGAGA
AGGACAAGGAGGCCAAGAAGTCTGACAAGAAGCCCTTCGGTAAGAGCAAG
GGTTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGAGGCTTCCAAGGCCGT
TACCGAGATGAACCAGAGAATGGTCAACGGCAAGCCCCTCTACGTTGCCC
TTGCCCAGCGCAAGGATGTCCGCCGCAGCCAGCTCGAGGCTAGCATCCAG
GCTCGCAACACCATCAGACAGCAGCAGGCCGCCGCTGCCGCTGGTATGCC
CCAGCCTTACATGCAGCCCGCTGTCTTCTACGGCCCCGGCCAGCAGGGCT
TCATCCCTGGTGGTCAGCGCGGCATGGCCTTCCCCCCTCAGCCCGGTATG
GTGATGGGTATCCCCGGTGGACGCCCCGGCCAGTACCCCGGTCCCTTCCC
CGGCCAGCAGGGTGGTCGCGGCATGGGCCCCAACCAGCAGATTCCCCCCA
ACTTTGCTCAGGGTATCCCCATGGGCATGCAGGGCCCTGGTGGCATCCCT
AACGGCATGGGATACCCCCAGATGGCTCAGGTGCAGTTCGGACGCGGCGC
TGGTGGCCGTGGTCAGGTCCCCGGAATGCCCATGGGTCAGGGTATGCGTG
GCGGTCCCGGTTACGGTCAGGGCCGTGGTGCTCCTGTTCAGCAGGGTCAG
ATGCGCCCTGGCCAGGGTGGTCGCGGACAGAACGCTGCTGCGCCCGCTGG
TCCTCAGGAGGGTGCCGCTGGTGGTGTTAACGCTCAGACTCTGGGTGCCG
CTCCCCCGGCCCAGCAGAAGCAGATGCTCGGCGAGGCTCTCTACCCCAAG
ATCCAGGCCCAGCAGCCTGAGCTGGCTGGTAAGATCACTGGTATGCTTCT
GGAGATGGACAACACCGAGTTGCTCAGCCTGCTTGAGGACGAGGAAGCCC
TGCGCGCCAAGGTCGATGAGGCCCTTAGCGTTTACGATGAGTACATGAAG
AACAAGGGCACCGAGTCCGAGGCTCCTGCCGCTGAGGCTGCCAAGCCCGA
GGCGGAGAAGGAGGCCTCGACCGAGGAGAACAAGGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PAB1_2CAN33_40775Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40775-T1.exon1CAN33_40775-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_40775-T1.exon2CAN33_40775-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40775-T1.cdsCAN33_40775-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40775-T1CAN33_40775-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR036053
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR006515
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR002004
DBxrefPFAM:PF13893
DBxrefPFAM:PF00076
DBxrefPFAM:PF00658
ProductProtein phosphatase PP2A regulatory subunit B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2913708..2916065 +
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