You are here

Home

CAN33_40810-T1, CAN33_40810-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40810-T1
Unique NameCAN33_40810-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2934047..2934993+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40810-T1 ID=CAN33_40810-T1|Name=CAN33_40810-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=947bp|location=Sequence derived from alignment at NKJJ01000017.1:2934047..2934993+ (Aspergillus niger FDAARGOS_311)
ATGCGCGCTCACCCCCATCAGAACCGCAAAGTACCTCCACGCCACGACGA
ATACAACGTCGGGTGGATATGCGTCTTGCCTATCGAGATGGCAGTTGCGA
AACTGATGTTGGATGAAATACATCCACCGTTGCCTATGCCGCCAAACGAT
CCCAATACATATATCCTTGGAAGGGTTGGAGATCACAACGTCGTGATTGC
TTGTTTACCAGCTGGCACGTATGGCTCTACGACATCTGTAGCGCTAGAGA
GGCAGGTATCCTCTAGTTTTCCGGCCATCCGCTTTTATCTTTCAGTCGGA
ATCGGTGGTGGCATACCAAGCAGCAAAGCAGACATTCGATTAGGCGATGT
TGTAGTGAGCCAGCCGATAGGCAAATCTGGAGGGTTGATCAGGTACGATT
TGGGTAAAGTATTGAGCTGGGACGAATCTTCACATCAAGTCCCTGAGTTT
CTGTCAACTGCTCTAGCTGCCCTCCAAGTGAATCACAACCTGTCAGGGCG
TATGGGGGTCACGTCGCCAGTTACCTTTCCGATATGCAGGAGAAACTTCC
TCCTGCCGCCGCTGAAAAGTTCGCGCGGCCAGAAGAGGACTTTCTGTTCC
AACCTGAATATGAACATATCGGATTCGATTCGTGTGCGGATTGCGATCGA
TCCAAATTAATTTTACGACGTGATCGAGAGCACGAAGAGCCTGTTATTCA
CTATGGATCCATTGCATCTGGATCTCAGGTGATGAAAAACGGCCAACTTC
GAGACCGAATTGGTCAGGAGCTGGGAGTACTTTGTTTTGAGCTAGAAGCC
GCAGGTCTCCTGGATAACCTTCCATGTCTGGCCATTCGAGGCATATCTGA
CTATGCCGACTCTCACAAAAACACAGCATGGCAAGGATATGCAGCAGCTG
CGGCAGCGGCCTATGCAAAGGAGCTTCTTTGGTGGTTCCAGCCCTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:2934047..2934993+

>CAN33_40810-T1 ID=CAN33_40810-T1|Name=CAN33_40810-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1746bp|location=Sequence derived from alignment at NKJJ01000017.1:2934047..2934993+ (Aspergillus niger FDAARGOS_311)
ATGCGCGCTCACCCCCATCAGAACCGCAAAGTACCTCCACGCCACGACGA
ATACAACGTCGGGTGGATATGCGTCTTGCCTATCGAGATGGCAGTTGCGA
AACTGATGTTGGATGAAATACATCCACCGTTGCCTATGCCGCCAAACGAT
CCCAATACATATATCCTTGGAAGGGTTGGAGATCACAACGTCGTGATTGC
TTGTTTACCAGCTGGCACGTATGGCTCTACGACATCTGTAGCGCTAGAGA
GGCAGGTATCCTCTAGTTTTCCGGCCATCCGCTTTTATCTTTCAGTCGGA
ATCGGTGGTGGCATACCAAGCAGCAAAGCAGACATTCGATTAGGCGATGT
TGTAGTGAGCCAGCCGATAGGCAAATCTGGAGGGTTGATCAGCTGCCCTC
CAAGTGAATCACAACCTGTCAGGGCGTATGGGGGTCACGTCGCCAGTTAC
CTTTCCGATATGCAGGAGAAACTTCCTCCTGCCGCCGCTGAAAAGTTCGC
GCGGCCAGAAGAGGACTTTCTGTTCCAACCTGAATATGAACATATCGGAT
TCGATTCGTGTGCGGATTGCGATCGATCCAAATTAATTTTACGACGTGAT
CGAGAGCACGAAGAGCCTGTTATTCACTATGGATCCATTGCATCTGGATC
TCAGGTGATGAAAAACGGCCAACTTCGAGACCGAATTGGTCAGGAGCTGG
GAGTACTTTGTTTTGAGCTAGAAGCCGCAGGTCTCCTGGATAACCTTCCA
TGTCTGGCCATTCGAGGCATATCTGACTATGCCGACTCTCACAAAAACAC
AGCATGGCAAGGATATGCAGCAGCTGCGGCAGCGGCCTATGCAAAGGAGC
TTCTTTGGTGGTTCCAGCCCTAGATGCGCGCTCACCCCCATCAGAACCGC
AAAGTACCTCCACGCCACGACGAATACAACGTCGGGTGGATATGCGTCTT
GCCTATCGAGATGGCAGTTGCGAAACTGATGTTGGATGAAATACATCCAC
CGTTGCCTATGCCGCCAAACGATCCCAATACATATATCCTTGGAAGGGTT
GGAGATCACAACGTCGTGATTGCTTGTTTACCAGCTGGCACGTATGGCTC
TACGACATCTGTAGCGCTAGAGAGGCAGGTATCCTCTAGTTTTCCGGCCA
TCCGCTTTTATCTTTCAGTCGGAATCGGTGGTGGCATACCAAGCAGCAAA
GCAGACATTCGATTAGGCGATGTTGTAGTGAGCCAGCCGATAGGCAAATC
TGGAGGGTTGATCAGCTGCCCTCCAAGTGAATCACAACCTGTCAGGGCGT
ATGGGGGTCACGTCGCCAGTTACCTTTCCGATATGCAGGAGAAACTTCCT
CCTGCCGCCGCTGAAAAGTTCGCGCGGCCAGAAGAGGACTTTCTGTTCCA
ACCTGAATATGAACATATCGGATTCGATTCGTGTGCGGATTGCGATCGAT
CCAAATTAATTTTACGACGTGATCGAGAGCACGAAGAGCCTGTTATTCAC
TATGGATCCATTGCATCTGGATCTCAGGTGATGAAAAACGGCCAACTTCG
AGACCGAATTGGTCAGGAGCTGGGAGTACTTTGTTTTGAGCTAGAAGCCG
CAGGTCTCCTGGATAACCTTCCATGTCTGGCCATTCGAGGCATATCTGAC
TATGCCGACTCTCACAAAAACACAGCATGGCAAGGATATGCAGCAGCTGC
GGCAGCGGCCTATGCAAAGGAGCTTCTTTGGTGGTTCCAGCCCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0009116nucleoside metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40810CAN33_40810Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40810-T1.exon1CAN33_40810-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_40810-T1.exon2CAN33_40810-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40810-T1.cdsCAN33_40810-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40810-T1CAN33_40810-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035994
DBxrefInterPro:IPR000845
DBxrefPFAM:PF01048
ProductPhosphorylase superfamily protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2934047..2934993 +
Powered by Drupal