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CAN33_40850-T1, CAN33_40850-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40850-T1
Unique NameCAN33_40850-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2957287..2958650-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40850-T1 ID=CAN33_40850-T1|Name=CAN33_40850-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1364bp|location=Sequence derived from alignment at NKJJ01000017.1:2957287..2958650- (Aspergillus niger FDAARGOS_311)
ATGGACCAGCCATCTGAGAATAACGAGCCAGACCACATCACGGAGACAAG
TCTGGAAACAGAGCAGAAGACTGCCGCCGAAGCCGAGGCCCTTGAGTCAG
AAAGGCTCAAGAATGCTGAGCTCGAAAGACGCAGAGCCGAGAAAGAAACG
GCCATTCGTCAAGCATGCGACTTGCGCGATTTTGATGCACTAGTCTCATA
TGCTACCTCAGAAGGCGGCTTCCTCAACGATGATGTCCGGCGAACTGCCT
GTGAGAACTACCCTATAACGCTCACATGCACTTTCTGACGTTCTATCAGG
GCCTATCCTTCTACAGTGTGATCGACGTGGACCCAATTTTGATTTTGCAG
GATGGGAACAACTACCTGCACATAGTGACGAAGAACAAGTTCAGCTTGAT
GTGAACAGGTCGTTCGTCTACTACCCTGAATGTAAGTCACCCTTTTTATG
GCTCTCGGTGGTGTCTAACTTGACCAGGCTCTGACCAGGAGCTATCCATC
AAGAAGGATGAGCTCTCCAAGTTGATCAAGCAAGTCTTGCGGTGCTTTCC
CATGCTCTGCTACTTTCAAGGCTATCATGATATCGTTCAAGTCCTGCTAT
TAGTGCTTGGTGGCCAAAATAGTGCTGCTGCTGTTGCACAAATTTCCCTT
CTCCGGATAAGAGATTACATGTTGCCGTCCCTTTCGCCGGCGCTGAAACA
TCTAGAGCTGATCCCTGCGATCATCGAAAAGGCCGATCCTGCATTACGAC
GTCATCTCGCCGAAATCAAACCATTCTTTGCACTCGCTGCGACTCTAACA
ATGTACTCGCACGATATTCAAGAATATAGTGACATTGCACGCCTTTTTGA
CTTTCTGCTGGCCCAGGAACCGGTAGTCTCCATATACCTTTTTGCGGCCA
TCATCCTCTCGCGCAAGAAAGAATTACTTGAGTTTTCAGTCGATGAAACC
GATATGTTGCATTTTACCCTGTCCAAGCTTCCAAATCCCTTGGATCTTGA
GGGTCTGATATCCCGCGCGATGCAGCTTTTCGAAGCTCACCCACCGGAAA
GTCTACCATTTGGGGCCTGGAAGCGCATTCCAGAGTGCAGTGTGCTCAAG
TCTTCACGGGACCTTGTCAGGATCCAAGCACCTGATGAGACAGTCGGCCT
CTTCGCGAAACAAGTACGGCATCTACGTTACGAGGAGCGGAAGGAGAAGA
CCGTTGCTTTCTTGTGGAATCACAGACGGACTATCGGCTCCGTGGCTGTG
ACGATATTTATTGGTGCTATGTCGTTCTGGATCAAGAAGAGGGGATTTGA
CAATACGATATGGTCGTATGTCAGTAGATTCCATGGGGCTTTGCAGGCCC
GAGGTTACATTTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2957287..2958650-

>CAN33_40850-T1 ID=CAN33_40850-T1|Name=CAN33_40850-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3807bp|location=Sequence derived from alignment at NKJJ01000017.1:2957287..2958650- (Aspergillus niger FDAARGOS_311)
GCTCTGACCAGGAGCTATCCATCAAGAAGGATGAGCTCTCCAAGTTGATC
AAGCAAGTCTTGCGGTGCTTTCCCATGCTCTGCTACTTTCAAGGCTATCA
TGATATCGTTCAAGTCCTGCTATTAGTGCTTGGTGGCCAAAATAGTGCTG
CTGCTGTTGCACAAATTTCCCTTCTCCGGATAAGAGATTACATGTTGCCG
TCCCTTTCGCCGGCGCTGAAACATCTAGAGCTGATCCCTGCGATCATCGA
AAAGGCCGATCCTGCATTACGACGTCATCTCGCCGAAATCAAACCATTCT
TTGCACTCGCTGCGACTCTAACAATGTACTCGCACGATATTCAAGAATAT
AGTGACATTGCACGCCTTTTTGACTTTCTGCTGGCCCAGGAACCGGTAGT
CTCCATATACCTTTTTGCGGCCATCATCCTCTCGCGCAAGAAAGAATTAC
TTGAGTTTTCAGTCGATGAAACCGATATGTTGCATTTTACCCTGTCCAAG
CTTCCAAATCCCTTGGATCTTGAGGGTCTGATATCCCGCGCGATGCAGCT
TTTCGAAGCTCACCCACCGGAAAGTCTACCATTTGGGGCCTGGAAGCGCA
TTCCAGAGTGCAGTGTGCTCAAGTCTTCACGGGACCTTGTCAGGATCCAA
GCACCTGATGAGACAGTCGGCCTCTTCGCGAAACAAGTACGGCATCTACG
TTACGAGGAGCGGAAGGAGAAGACCGTTGCTTTCTTGTGGAATCACAGAC
GGACTATCGGCTCCGTGGCTGTGACGATATTTATTGGTGCTATGTCGTTC
TGGATCAAGAAGAGGGGATTTGACAATACGATATGGTCGTATGTCAGTAG
ATTCCATGGGGCTTTGCAGGCCCGAGGTTACATTTAAGGCCTATCCTTCT
ACAGTGTGATCGACGTGGACCCAATTTTGATTTTGCAGGATGGGAACAAC
TACCTGCACATAGTGACGAAGAACAAGTTCAGCTTGATGTGAACAGGTCG
TTCGTCTACTACCCTGAATATGGACCAGCCATCTGAGAATAACGAGCCAG
ACCACATCACGGAGACAAGTCTGGAAACAGAGCAGAAGACTGCCGCCGAA
GCCGAGGCCCTTGAGTCAGAAAGGCTCAAGAATGCTGAGCTCGAAAGACG
CAGAGCCGAGAAAGAAACGGCCATTCGTCAAGCATGCGACTTGCGCGATT
TTGATGCACTAGTCTCATATGCTACCTCAGAAGGCGGCTTCCTCAACGAT
GATGTCCGGCGAACTGCCTGCTCTGACCAGGAGCTATCCATCAAGAAGGA
TGAGCTCTCCAAGTTGATCAAGCAAGTCTTGCGGTGCTTTCCCATGCTCT
GCTACTTTCAAGGCTATCATGATATCGTTCAAGTCCTGCTATTAGTGCTT
GGTGGCCAAAATAGTGCTGCTGCTGTTGCACAAATTTCCCTTCTCCGGAT
AAGAGATTACATGTTGCCGTCCCTTTCGCCGGCGCTGAAACATCTAGAGC
TGATCCCTGCGATCATCGAAAAGGCCGATCCTGCATTACGACGTCATCTC
GCCGAAATCAAACCATTCTTTGCACTCGCTGCGACTCTAACAATGTACTC
GCACGATATTCAAGAATATAGTGACATTGCACGCCTTTTTGACTTTCTGC
TGGCCCAGGAACCGGTAGTCTCCATATACCTTTTTGCGGCCATCATCCTC
TCGCGCAAGAAAGAATTACTTGAGTTTTCAGTCGATGAAACCGATATGTT
GCATTTTACCCTGTCCAAGCTTCCAAATCCCTTGGATCTTGAGGGTCTGA
TATCCCGCGCGATGCAGCTTTTCGAAGCTCACCCACCGGAAAGTCTACCA
TTTGGGGCCTGGAAGCGCATTCCAGAGTGCAGTGTGCTCAAGTCTTCACG
GGACCTTGTCAGGATCCAAGCACCTGATGAGACAGTCGGCCTCTTCGCGA
AACAAGTACGGCATCTACGTTACGAGGAGCGGAAGGAGAAGACCGTTGCT
TTCTTGTGGAATCACAGACGGACTATCGGCTCCGTGGCTGTGACGATATT
TATTGGTGCTATGTCGTTCTGGATCAAGAAGAGGGGATTTGACAATACGA
TATGGTCGTATGTCAGTAGATTCCATGGGGCTTTGCAGGCCCGAGGTTAC
ATTTAAGGCCTATCCTTCTACAGTGTGATCGACGTGGACCCAATTTTGAT
TTTGCAGGATGGGAACAACTACCTGCACATAGTGACGAAGAACAAGTTCA
GCTTGATGTGAACAGGTCGTTCGTCTACTACCCTGAATATGGACCAGCCA
TCTGAGAATAACGAGCCAGACCACATCACGGAGACAAGTCTGGAAACAGA
GCAGAAGACTGCCGCCGAAGCCGAGGCCCTTGAGTCAGAAAGGCTCAAGA
ATGCTGAGCTCGAAAGACGCAGAGCCGAGAAAGAAACGGCCATTCGTCAA
GCATGCGACTTGCGCGATTTTGATGCACTAGTCTCATATGCTACCTCAGA
AGGCGGCTTCCTCAACGATGATGTCCGGCGAACTGCCTGCTCTGACCAGG
AGCTATCCATCAAGAAGGATGAGCTCTCCAAGTTGATCAAGCAAGTCTTG
CGGTGCTTTCCCATGCTCTGCTACTTTCAAGGCTATCATGATATCGTTCA
AGTCCTGCTATTAGTGCTTGGTGGCCAAAATAGTGCTGCTGCTGTTGCAC
AAATTTCCCTTCTCCGGATAAGAGATTACATGTTGCCGTCCCTTTCGCCG
GCGCTGAAACATCTAGAGCTGATCCCTGCGATCATCGAAAAGGCCGATCC
TGCATTACGACGTCATCTCGCCGAAATCAAACCATTCTTTGCACTCGCTG
CGACTCTAACAATGTACTCGCACGATATTCAAGAATATAGTGACATTGCA
CGCCTTTTTGACTTTCTGCTGGCCCAGGAACCGGTAGTCTCCATATACCT
TTTTGCGGCCATCATCCTCTCGCGCAAGAAAGAATTACTTGAGTTTTCAG
TCGATGAAACCGATATGTTGCATTTTACCCTGTCCAAGCTTCCAAATCCC
TTGGATCTTGAGGGTCTGATATCCCGCGCGATGCAGCTTTTCGAAGCTCA
CCCACCGGAAAGTCTACCATTTGGGGCCTGGAAGCGCATTCCAGAGTGCA
GTGTGCTCAAGTCTTCACGGGACCTTGTCAGGATCCAAGCACCTGATGAG
ACAGTCGGCCTCTTCGCGAAACAAGTACGGCATCTACGTTACGAGGAGCG
GAAGGAGAAGACCGTTGCTTTCTTGTGGAATCACAGACGGACTATCGGCT
CCGTGGCTGTGACGATATTTATTGGTGCTATGTCGTTCTGGATCAAGAAG
AGGGGATTTGACAATACGATATGGTCGTATGTCAGTAGATTCCATGGGGC
TTTGCAGGCCCGAGGTTACATTTAAGGCCTATCCTTCTACAGTGTGATCG
ACGTGGACCCAATTTTGATTTTGCAGGATGGGAACAACTACCTGCACATA
GTGACGAAGAACAAGTTCAGCTTGATGTGAACAGGTCGTTCGTCTACTAC
CCTGAATATGGACCAGCCATCTGAGAATAACGAGCCAGACCACATCACGG
AGACAAGTCTGGAAACAGAGCAGAAGACTGCCGCCGAAGCCGAGGCCCTT
GAGTCAGAAAGGCTCAAGAATGCTGAGCTCGAAAGACGCAGAGCCGAGAA
AGAAACGGCCATTCGTCAAGCATGCGACTTGCGCGATTTTGATGCACTAG
TCTCATATGCTACCTCAGAAGGCGGCTTCCTCAACGATGATGTCCGGCGA
ACTGCCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40850CAN33_40850Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40850-T1CAN33_40850-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40850-T1.cdsCAN33_40850-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40850-T1.exon3CAN33_40850-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40850-T1.exon2CAN33_40850-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40850-T1.exon1CAN33_40850-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092642UD
DBxrefInterPro:IPR035969
DBxrefInterPro:IPR000195
DBxrefPFAM:PF00566
ProductRab-GTPase-TBC domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2957287..2958650 -
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