You are here

Home

CAN33_40865-T1, CAN33_40865-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40865-T1
Unique NameCAN33_40865-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2968702..2969141-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40865-T1 ID=CAN33_40865-T1|Name=CAN33_40865-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=440bp|location=Sequence derived from alignment at NKJJ01000017.1:2968702..2969141- (Aspergillus niger FDAARGOS_311)
ATGCCCCCACCTTCCGCCAATGGGGTTTTGAAGACGTACGTCCCTACCTA
TCTACCTACTTCCATAACCCCCACCCAACTAAACAAAGAATAGATAAACG
CTTCCCTCCCCAACAGCCCGACTGAAAAGCCCATCATTTTAATCGACGTG
CGCGAGCCCGCCGAGCTCTCCTCCACCGGCATCATCCCCTCGGCTGTGAG
CGTGCCGCTCGCCTCTCAACCGGACGCACTCTTCCTGACTCCGGAGGAAT
TCGAGACGAGGTTCGGGTTCCCCAAGCCTGGTGTGAAGGGGGATGAGGAG
GGTGCCGAGATTGTGTTTTATTGTAAGGCGGGGGTGAGGGCGCGCGCCGC
GGCGCAGTTGGCGGAGCAGGCGGGGTATGAGGCAAGTAGGCTGGGGGTTT
ATGATGGGAGTTGGTTGGATTGGGCGAAGAAGGGGGGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:2968702..2969141-

>CAN33_40865-T1 ID=CAN33_40865-T1|Name=CAN33_40865-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=936bp|location=Sequence derived from alignment at NKJJ01000017.1:2968702..2969141- (Aspergillus niger FDAARGOS_311)
GGGGGTAGCCCGACTGAAAAGCCCATCATTTTAATCGACGTGCGCGAGCC
CGCCGAGCTCTCCTCCACCGGCATCATCCCCTCGGCTGTGAGCGTGCCGC
TCGCCTCTCAACCGGACGCACTCTTCCTGACTCCGGAGGAATTCGAGACG
AGGTTCGGGTTCCCCAAGCCTGGTGTGAAGGGGGATGAGGAGGGTGCCGA
GATTGTGTTTTATTGTAAGGCGGGGGTGAGGGCGCGCGCCGCGGCGCAGT
TGGCGGAGCAGGCGGGGTATGAGGCAAATGCCCCCACCTTCCGCCAATGG
GGTTTTGAAGACGGGGGTAGCCCGACTGAAAAGCCCATCATTTTAATCGA
CGTGCGCGAGCCCGCCGAGCTCTCCTCCACCGGCATCATCCCCTCGGCTG
TGAGCGTGCCGCTCGCCTCTCAACCGGACGCACTCTTCCTGACTCCGGAG
GAATTCGAGACGAGGTTCGGGTTCCCCAAGCCTGGTGTGAAGGGGGATGA
GGAGGGTGCCGAGATTGTGTTTTATTGTAAGGCGGGGGTGAGGGCGCGCG
CCGCGGCGCAGTTGGCGGAGCAGGCGGGGTATGAGGCAAATGCCCCCACC
TTCCGCCAATGGGGTTTTGAAGACGGGGGTAGCCCGACTGAAAAGCCCAT
CATTTTAATCGACGTGCGCGAGCCCGCCGAGCTCTCCTCCACCGGCATCA
TCCCCTCGGCTGTGAGCGTGCCGCTCGCCTCTCAACCGGACGCACTCTTC
CTGACTCCGGAGGAATTCGAGACGAGGTTCGGGTTCCCCAAGCCTGGTGT
GAAGGGGGATGAGGAGGGTGCCGAGATTGTGTTTTATTGTAAGGCGGGGG
TGAGGGCGCGCGCCGCGGCGCAGTTGGCGGAGCAGGCGGGGTATGAGGCA
AATGCCCCCACCTTCCGCCAATGGGGTTTTGAAGAC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40865CAN33_40865Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40865-T1CAN33_40865-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40865-T1.cdsCAN33_40865-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40865-T1.exon3CAN33_40865-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_40865-T1.exon2CAN33_40865-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_40865-T1.exon1CAN33_40865-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001763
DBxrefInterPro:IPR036873
DBxrefPFAM:PF00581
ProductRhodanese-like domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2968702..2969141 -
Powered by Drupal