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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2989993..2990750+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40905-T1 ID=CAN33_40905-T1|Name=CAN33_40905-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=758bp|location=Sequence derived from alignment at NKJJ01000017.1:2989993..2990750+ (Aspergillus niger FDAARGOS_311)
ATGCTCGCTGCTACTCTTCTCAGCCTGTCAGCAGTGGCTGTCGCTCTTCC
AGCATCCACCTATGATGGTTTGTTGTCCTTTTATTTTCATTTTTACCTCA
GCCAACCTAGCTACGCTAACTCTTCGCACTACCTACAGCCCTCCCAACCG
CCGGAACAGTGATAAACCTAGATATCACCGCTTTGAACGAGACCTACACT
GTTCAAGAGAACGACACCCTATCAGCCATTGCCGCCAATTACGGCGTGGG
AACCTGTGATCTCGCCCGGCTGAATATCCTCGCTGATCCCAACTTCATCT
ATGCTGGCGAGGTGCTTCGCATTCCTGCTCAACCGACCTTCCCAGATGAC
CTGAGCTGCTTCAGCACCAACAATACCGAGGCCACCAACACTTGTATCGA
TAGTGGTCCCCACGTATATACGATCATGCCTGGAGACACCATTCAGAAGA
TCGCCAACGAACGATTCAACATCACGGTCGAGTCTGTCATCAACCAGACC
GCTCAAACTGGGTATATTGCCGCTCTGAACCCTGGCCCCTATGATGTCCT
TCAGACGGGTGAGACGGTGAAGATCCCTATCTGCGACAATACTGCCTGTA
CTATGACTCAATTTACCTTGGGCTATGGTACCCTGCAAGACTTTGCTACT
TACTATGGGGTCGCTGTGGGACAGATTATGGCGTTGAATTTGGGCTATAA
CCATTCAGAAGCTGCGGTTCCTTTGGGAGTACTTTACGATTGTAGCGCTG
TGAATTAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2989993..2990750+ >CAN33_40905-T1 ID=CAN33_40905-T1|Name=CAN33_40905-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1374bp|location=Sequence derived from alignment at NKJJ01000017.1:2989993..2990750+ (Aspergillus niger FDAARGOS_311)
ATGCTCGCTGCTACTCTTCTCAGCCTGTCAGCAGTGGCTGTCGCTCTTCC
AGCATCCACCTATGATGCCCTCCCAACCGCCGGAACAGTGATAAACCTAG
ATATCACCGCTTTGAACGAGACCTACACTGTTCAAGAGAACGACACCCTA
TCAGCCATTGCCGCCAATTACGGCGTGGGAACCTGTGATCTCGCCCGGCT
GAATATCCTCGCTGATCCCAACTTCATCTATGCTGGCGAGGTGCTTCGCA
TTCCTGCTCAACCGACCTTCCCAGATGACCTGAGCTGCTTCAGCACCAAC
AATACCGAGGCCACCAACACTTGTATCGATAGTGGTCCCCACGTATATAC
GATCATGCCTGGAGACACCATTCAGAAGATCGCCAACGAACGATTCAACA
TCACGGTCGAGTCTGTCATCAACCAGACCGCTCAAACTGGGTATATTGCC
GCTCTGAACCCTGGCCCCTATGATGTCCTTCAGACGGGTGAGACGGTGAA
GATCCCTATCTGCGACAATACTGCCTGTACTATGACTCAATTTACCTTGG
GCTATGGTACCCTGCAAGACTTTGCTACTTACTATGGGGTCGCTGTGGGA
CAGATTATGGCGTTGAATTTGGGCTATAACCATTCAGAAGCTGCGGTTCC
TTTGGGAGTACTTTACGATTGTAGCGCTGTGAATTAAATGCTCGCTGCTA
CTCTTCTCAGCCTGTCAGCAGTGGCTGTCGCTCTTCCAGCATCCACCTAT
GATGCCCTCCCAACCGCCGGAACAGTGATAAACCTAGATATCACCGCTTT
GAACGAGACCTACACTGTTCAAGAGAACGACACCCTATCAGCCATTGCCG
CCAATTACGGCGTGGGAACCTGTGATCTCGCCCGGCTGAATATCCTCGCT
GATCCCAACTTCATCTATGCTGGCGAGGTGCTTCGCATTCCTGCTCAACC
GACCTTCCCAGATGACCTGAGCTGCTTCAGCACCAACAATACCGAGGCCA
CCAACACTTGTATCGATAGTGGTCCCCACGTATATACGATCATGCCTGGA
GACACCATTCAGAAGATCGCCAACGAACGATTCAACATCACGGTCGAGTC
TGTCATCAACCAGACCGCTCAAACTGGGTATATTGCCGCTCTGAACCCTG
GCCCCTATGATGTCCTTCAGACGGGTGAGACGGTGAAGATCCCTATCTGC
GACAATACTGCCTGTACTATGACTCAATTTACCTTGGGCTATGGTACCCT
GCAAGACTTTGCTACTTACTATGGGGTCGCTGTGGGACAGATTATGGCGT
TGAATTTGGGCTATAACCATTCAGAAGCTGCGGTTCCTTTGGGAGTACTT
TACGATTGTAGCGCTGTGAATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-15) |
| Note | CAZy:CBM50 |
| DBxref | InterPro:IPR036779 |
| DBxref | InterPro:IPR018392 |
| DBxref | PFAM:PF01476 |
| Product | LysM domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2989993..2990750 + |
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