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CAN33_40975-T1, CAN33_40975-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40975-T1
Unique NameCAN33_40975-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3034029..3034486+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40975-T1 ID=CAN33_40975-T1|Name=CAN33_40975-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=458bp|location=Sequence derived from alignment at NKJJ01000017.1:3034029..3034486+ (Aspergillus niger FDAARGOS_311)
ATGTCTCACAAGGTTCACGACATCACCTCGTATGTGCAATTCCTTCCCTT
TCTCCCCCGAAGCTCATCGTCTTACCAGCAGACATCCCCGCCCCTCTCTC
TCCCCGCACTCTACCCCTCTATCCATTCTGAGACCACTACTAATTTTACT
GTCTTTGCAGTAAGGCCGAGTTCGCCGAGAAGGTTACCAACTCCACCGAC
GCCATCGTCCTTGACTGCTTCGCTACCTGGTGCGGTCCTTGCAAGGCTAT
CTCCCCCAAGGTCGAGGAGTTCAGCAACACCTACCCCAACGCCAAGTTCT
ACAAGATCGACGTCGACGAACTGTCCGAGGTTGCTGCCGAGCTCGGTATC
CGTGCCATGCCCACTTTCCTGCTCTTCAAGGACGGCAAGAAGTTCGACGA
CCTCACCGGTGCCAACCCCAAGGGTCTGGAGCAGAAGATCCAGGCTCTGC
TTGCATAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:3034029..3034486+

>CAN33_40975-T1 ID=CAN33_40975-T1|Name=CAN33_40975-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=654bp|location=Sequence derived from alignment at NKJJ01000017.1:3034029..3034486+ (Aspergillus niger FDAARGOS_311)
ATGTCTCACAAGGTTCACGACATCACCTCTAAGGCCGAGTTCGCCGAGAA
GGTTACCAACTCCACCGACGCCATCGTCCTTGACTGCTTCGCTACCTGGT
GCGGTCCTTGCAAGGCTATCTCCCCCAAGGTCGAGGAGTTCAGCAACACC
TACCCCAACGCCAAGTTCTACAAGATCGACGTCGACGAACTGTCCGAGGT
TGCTGCCGAGCTCGGTATCCGTGCCATGCCCACTTTCCTGCTCTTCAAGG
ACGGCAAGAAGTTCGACGACCTCACCGGTGCCAACCCCAAGGGTCTGGAG
CAGAAGATCCAGGCTCTGCTTGCATAAATGTCTCACAAGGTTCACGACAT
CACCTCTAAGGCCGAGTTCGCCGAGAAGGTTACCAACTCCACCGACGCCA
TCGTCCTTGACTGCTTCGCTACCTGGTGCGGTCCTTGCAAGGCTATCTCC
CCCAAGGTCGAGGAGTTCAGCAACACCTACCCCAACGCCAAGTTCTACAA
GATCGACGTCGACGAACTGTCCGAGGTTGCTGCCGAGCTCGGTATCCGTG
CCATGCCCACTTTCCTGCTCTTCAAGGACGGCAAGAAGTTCGACGACCTC
ACCGGTGCCAACCCCAAGGGTCTGGAGCAGAAGATCCAGGCTCTGCTTGC
ATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRX1CAN33_40975Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40975-T1.exon1CAN33_40975-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_40975-T1.exon2CAN33_40975-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40975-T1.cdsCAN33_40975-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40975-T1CAN33_40975-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR017937
DBxrefInterPro:IPR005746
DBxrefInterPro:IPR013766
DBxrefPFAM:PF00085
Productthioredoxin trx1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3034029..3034486 +
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