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CAN33_4100-T1, CAN33_4100-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4100-T1
Unique NameCAN33_4100-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:187947..188628+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4100-T1 ID=CAN33_4100-T1|Name=CAN33_4100-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=682bp|location=Sequence derived from alignment at NKJJ01000019.1:187947..188628+ (Aspergillus niger FDAARGOS_311)
ATGGGGAAATCGGCAAAGGCGAATAAACCCCTCACCCAGGAAGAGATCTG
GGATGATTCTGCCCTTGTCCAGAGCTGGGATGAGGCTGTCGAGGAATACA
AAGTATGCGCTTCCTCCCCGCGCACGTGATCCGTTCGCTGACCCGAACAT
AACAGCTCTACCACAGCATCCATGCGAAGGGGGAGAATGTTGAAGATGTC
CTGAGGGAAGCAGAGGCTGCTGAGAAAGCTGAGATGGAGCAAGATGAGCA
GCCGTTGGACGAGTCGGCCGACCGCATGGATGCCGATGTCGACGCCGACA
CTACTGCCAATGCAACAACTCCAGCCGAACCTCAACAGGTGTCACAGGCC
AAAATGTCGCAGGTGAGTTACTCAGTTTGCCGGATGAATCTACTAGGCTG
ACTTCATTCTAGGCTGCGGAAGGGCCAGAACAACCCTTTGTACAGGGTGC
CCAGGTCACGGAGCAAACGGCCGGGCCCAGTCCCGTAGGAGCGCCTCCTA
TGCCTCATGCCACCCTATCACAAGGTAAGATGCATTGCCTCCTTTTTACA
CTCTGGAGAAACTGACTTCCTTTAGTGCAAGACGAAGGACTCAAAAACCT
CATGATGGCTTGGTACTATGCTGGATACTACACTGGTCTATATGAGGGCC
AACAGCGAGCAAACCAGAACAGGAGCTCATAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:187947..188628+

>CAN33_4100-T1 ID=CAN33_4100-T1|Name=CAN33_4100-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2112bp|location=Sequence derived from alignment at NKJJ01000019.1:187947..188628+ (Aspergillus niger FDAARGOS_311)
ATGGGGAAATCGGCAAAGGCGAATAAACCCCTCACCCAGGAAGAGATCTG
GGATGATTCTGCCCTTGTCCAGAGCTGGGATGAGGCTGTCGAGGAATACA
AACTCTACCACAGCATCCATGCGAAGGGGGAGAATGTTGAAGATGTCCTG
AGGGAAGCAGAGGCTGCTGAGAAAGCTGAGATGGAGCAAGATGAGCAGCC
GTTGGACGAGTCGGCCGACCGCATGGATGCCGATGTCGACGCCGACACTA
CTGCCAATGCAACAACTCCAGCCGAACCTCAACAGGTGTCACAGGCCAAA
ATGTCGCAGGCTGCGGAAGGGCCAGAACAACCCTTTGTACAGGGTGCCCA
GGTCACGGAGCAAACGGCCGGGCCCAGTCCCGTAGGAGCGCCTCCTATGC
CTCATGCCACCCTATCACAAGTGCAAGACGAAGGACTCAAAAACCTCATG
ATGGCTTGGTACTATGCTGGATACTACACTGGTCTATATGAGGGCCAACA
GCGAGCAAACCAGAACAGGAGCTCATAAATGGGGAAATCGGCAAAGGCGA
ATAAACCCCTCACCCAGGAAGAGATCTGGGATGATTCTGCCCTTGTCCAG
AGCTGGGATGAGGCTGTCGAGGAATACAAACTCTACCACAGCATCCATGC
GAAGGGGGAGAATGTTGAAGATGTCCTGAGGGAAGCAGAGGCTGCTGAGA
AAGCTGAGATGGAGCAAGATGAGCAGCCGTTGGACGAGTCGGCCGACCGC
ATGGATGCCGATGTCGACGCCGACACTACTGCCAATGCAACAACTCCAGC
CGAACCTCAACAGGTGTCACAGGCCAAAATGTCGCAGGCTGCGGAAGGGC
CAGAACAACCCTTTGTACAGGGTGCCCAGGTCACGGAGCAAACGGCCGGG
CCCAGTCCCGTAGGAGCGCCTCCTATGCCTCATGCCACCCTATCACAAGT
GCAAGACGAAGGACTCAAAAACCTCATGATGGCTTGGTACTATGCTGGAT
ACTACACTGGTCTATATGAGGGCCAACAGCGAGCAAACCAGAACAGGAGC
TCATAAATGGGGAAATCGGCAAAGGCGAATAAACCCCTCACCCAGGAAGA
GATCTGGGATGATTCTGCCCTTGTCCAGAGCTGGGATGAGGCTGTCGAGG
AATACAAACTCTACCACAGCATCCATGCGAAGGGGGAGAATGTTGAAGAT
GTCCTGAGGGAAGCAGAGGCTGCTGAGAAAGCTGAGATGGAGCAAGATGA
GCAGCCGTTGGACGAGTCGGCCGACCGCATGGATGCCGATGTCGACGCCG
ACACTACTGCCAATGCAACAACTCCAGCCGAACCTCAACAGGTGTCACAG
GCCAAAATGTCGCAGGCTGCGGAAGGGCCAGAACAACCCTTTGTACAGGG
TGCCCAGGTCACGGAGCAAACGGCCGGGCCCAGTCCCGTAGGAGCGCCTC
CTATGCCTCATGCCACCCTATCACAAGTGCAAGACGAAGGACTCAAAAAC
CTCATGATGGCTTGGTACTATGCTGGATACTACACTGGTCTATATGAGGG
CCAACAGCGAGCAAACCAGAACAGGAGCTCATAAATGGGGAAATCGGCAA
AGGCGAATAAACCCCTCACCCAGGAAGAGATCTGGGATGATTCTGCCCTT
GTCCAGAGCTGGGATGAGGCTGTCGAGGAATACAAACTCTACCACAGCAT
CCATGCGAAGGGGGAGAATGTTGAAGATGTCCTGAGGGAAGCAGAGGCTG
CTGAGAAAGCTGAGATGGAGCAAGATGAGCAGCCGTTGGACGAGTCGGCC
GACCGCATGGATGCCGATGTCGACGCCGACACTACTGCCAATGCAACAAC
TCCAGCCGAACCTCAACAGGTGTCACAGGCCAAAATGTCGCAGGCTGCGG
AAGGGCCAGAACAACCCTTTGTACAGGGTGCCCAGGTCACGGAGCAAACG
GCCGGGCCCAGTCCCGTAGGAGCGCCTCCTATGCCTCATGCCACCCTATC
ACAAGTGCAAGACGAAGGACTCAAAAACCTCATGATGGCTTGGTACTATG
CTGGATACTACACTGGTCTATATGAGGGCCAACAGCGAGCAAACCAGAAC
AGGAGCTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4100CAN33_4100Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4100-T1.exon1CAN33_4100-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_4100-T1.exon2CAN33_4100-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4100-T1.exon3CAN33_4100-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_4100-T1.exon4CAN33_4100-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4100-T1.cdsCAN33_4100-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4100-T1CAN33_4100-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR010304
ProductSurvival motor neuron protein (SMN) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:187947..188628 +
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