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CAN33_41045-T1, CAN33_41045-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41045-T1
Unique NameCAN33_41045-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3090830..3091901+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41045-T1 ID=CAN33_41045-T1|Name=CAN33_41045-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1072bp|location=Sequence derived from alignment at NKJJ01000017.1:3090830..3091901+ (Aspergillus niger FDAARGOS_311)
ATGGAATCAGAGATGCTGGAACCCGACGAGATAGTAGTTGGCAAGCGGGA
GGTAAGATAGTATCGTGGTGTTTGGAATGACATTGCAACAGTACTGACAT
TAAATGTAATCACTATCGTGCTCATGTGACTGCGAGGCAGCAATGGAGGC
AAGTACAGTAGCCGTGACGTTGTAATTGGCCATCTCGTGTTGCTATCCTG
GGATTTGCCAGAATACTTGGGGATAAGTTGATGAGAAACAACATAGGGCA
CTGAAAGAGGTGATGGTTAAACATGCATCGCGAACACAAGGAATCTGCCG
GGAAACTGAGCACTTGAAGCACCACCTTGCTAGAGACCTCATTGGGAGTC
CAGGCAAGCATCTGGGAGTTGAGGCTATACAGCTGGTGGAGATACCCGCT
GCTGAAAGGCAGCAGTTCGAAACCTGGAGGCGCCTACAAGAAGGCTCGCG
TATCCGCAGTAGTTAGAGACCTAATCTGCCTCCTCCCCCGACATACCCAT
CACCGCCATGGTTTACATCATCAAGATTCACGTTGACGGTGGCTGTAGAG
CCGAACGGTCAGCCAGGCTCGATCGGGGCTGCAGCCGCTGCTTTTAAGGA
CGCGTCCGGCAGATTCCATGGCGAGACAACAGAAGACTTGCCTTCATATA
CCGCTCCGACGAATCAGCGAGCTGAGATAACATCCGTTATCCTCGGTCTA
AGGATGGCCTTGAAGAGATATGATCAACTACACTCTGACCCTTGGTTGGA
TGTCACGATCTACTCCGACTCGGCATTTGCAGTTGACTGTATGGAAGAGT
GGGTCTACAAGTGGATCAGGAACGGATGGATGAATTGTAAAGGGAACGAG
GTAGCAAATCGAGATCTCATTGAAGAAGCAGTGGTTCTCAGTGACCGGCT
GAAGGAGAAGGGAGATGTGCGTTATGTATGGATTCCAAGAGAGGAGAATC
AGTATGTTGATAAGCTGTGCAATGATTTGATGAACACTATGTGTTTAGTT
GATAGGCTGTGCAATGACCTGAAGAACGCTAGGTGTGACGAGCAAAGCTC
CTCTTCTGATGACAGCTACTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:3090830..3091901+

>CAN33_41045-T1 ID=CAN33_41045-T1|Name=CAN33_41045-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3252bp|location=Sequence derived from alignment at NKJJ01000017.1:3090830..3091901+ (Aspergillus niger FDAARGOS_311)
ATGGAATCAGAGATGCTGGAACCCGACGAGATAGTAGTTGGCAAGCGGGA
GGCAGCAATGGAGGCAAGTACAGTAGCCGTGACGTTGGCACTGAAAGAGG
TGATGGTTAAACATGCATCGCGAACACAAGGAATCTGCCGGGAAACTGAG
CACTTGAAGCACCACCTTGCTAGAGACCTCATTGGGAGTCCAGGCAAGCA
TCTGGGAGTTGAGGCTATACAGCTGGTGGAGATACCCGCTGCTGAAAGGC
AGCAGTTCGAAACCTGGAGGCGCCTACAAGAAGGCTCGCAGCCGAACGGT
CAGCCAGGCTCGATCGGGGCTGCAGCCGCTGCTTTTAAGGACGCGTCCGG
CAGATTCCATGGCGAGACAACAGAAGACTTGCCTTCATATACCGCTCCGA
CGAATCAGCGAGCTGAGATAACATCCGTTATCCTCGGTCTAAGGATGGCC
TTGAAGAGATATGATCAACTACACTCTGACCCTTGGTTGGATGTCACGAT
CTACTCCGACTCGGCATTTGCAGTTGACTGTATGGAAGAGTGGGTCTACA
AGTGGATCAGGAACGGATGGATGAATTGTAAAGGGAACGAGGTAGCAAAT
CGAGATCTCATTGAAGAAGCAGTGGTTCTCAGTGACCGGCTGAAGGAGAA
GGGAGATGTGCGTTATGTATGGATTCCAAGAGAGGAGAATCAGTATGTTG
ATAAGCTGTGCAATGATTTGATGAACACTATGTGTTTAGTTGATAGGCTG
TGCAATGACCTGAAGAACGCTAGGTGTGACGAGCAAAGCTCCTCTTCTGA
TGACAGCTACTAGATGGAATCAGAGATGCTGGAACCCGACGAGATAGTAG
TTGGCAAGCGGGAGGCAGCAATGGAGGCAAGTACAGTAGCCGTGACGTTG
GCACTGAAAGAGGTGATGGTTAAACATGCATCGCGAACACAAGGAATCTG
CCGGGAAACTGAGCACTTGAAGCACCACCTTGCTAGAGACCTCATTGGGA
GTCCAGGCAAGCATCTGGGAGTTGAGGCTATACAGCTGGTGGAGATACCC
GCTGCTGAAAGGCAGCAGTTCGAAACCTGGAGGCGCCTACAAGAAGGCTC
GCAGCCGAACGGTCAGCCAGGCTCGATCGGGGCTGCAGCCGCTGCTTTTA
AGGACGCGTCCGGCAGATTCCATGGCGAGACAACAGAAGACTTGCCTTCA
TATACCGCTCCGACGAATCAGCGAGCTGAGATAACATCCGTTATCCTCGG
TCTAAGGATGGCCTTGAAGAGATATGATCAACTACACTCTGACCCTTGGT
TGGATGTCACGATCTACTCCGACTCGGCATTTGCAGTTGACTGTATGGAA
GAGTGGGTCTACAAGTGGATCAGGAACGGATGGATGAATTGTAAAGGGAA
CGAGGTAGCAAATCGAGATCTCATTGAAGAAGCAGTGGTTCTCAGTGACC
GGCTGAAGGAGAAGGGAGATGTGCGTTATGTATGGATTCCAAGAGAGGAG
AATCAGTATGTTGATAAGCTGTGCAATGATTTGATGAACACTATGTGTTT
AGTTGATAGGCTGTGCAATGACCTGAAGAACGCTAGGTGTGACGAGCAAA
GCTCCTCTTCTGATGACAGCTACTAGATGGAATCAGAGATGCTGGAACCC
GACGAGATAGTAGTTGGCAAGCGGGAGGCAGCAATGGAGGCAAGTACAGT
AGCCGTGACGTTGGCACTGAAAGAGGTGATGGTTAAACATGCATCGCGAA
CACAAGGAATCTGCCGGGAAACTGAGCACTTGAAGCACCACCTTGCTAGA
GACCTCATTGGGAGTCCAGGCAAGCATCTGGGAGTTGAGGCTATACAGCT
GGTGGAGATACCCGCTGCTGAAAGGCAGCAGTTCGAAACCTGGAGGCGCC
TACAAGAAGGCTCGCAGCCGAACGGTCAGCCAGGCTCGATCGGGGCTGCA
GCCGCTGCTTTTAAGGACGCGTCCGGCAGATTCCATGGCGAGACAACAGA
AGACTTGCCTTCATATACCGCTCCGACGAATCAGCGAGCTGAGATAACAT
CCGTTATCCTCGGTCTAAGGATGGCCTTGAAGAGATATGATCAACTACAC
TCTGACCCTTGGTTGGATGTCACGATCTACTCCGACTCGGCATTTGCAGT
TGACTGTATGGAAGAGTGGGTCTACAAGTGGATCAGGAACGGATGGATGA
ATTGTAAAGGGAACGAGGTAGCAAATCGAGATCTCATTGAAGAAGCAGTG
GTTCTCAGTGACCGGCTGAAGGAGAAGGGAGATGTGCGTTATGTATGGAT
TCCAAGAGAGGAGAATCAGTATGTTGATAAGCTGTGCAATGATTTGATGA
ACACTATGTGTTTAGTTGATAGGCTGTGCAATGACCTGAAGAACGCTAGG
TGTGACGAGCAAAGCTCCTCTTCTGATGACAGCTACTAGATGGAATCAGA
GATGCTGGAACCCGACGAGATAGTAGTTGGCAAGCGGGAGGCAGCAATGG
AGGCAAGTACAGTAGCCGTGACGTTGGCACTGAAAGAGGTGATGGTTAAA
CATGCATCGCGAACACAAGGAATCTGCCGGGAAACTGAGCACTTGAAGCA
CCACCTTGCTAGAGACCTCATTGGGAGTCCAGGCAAGCATCTGGGAGTTG
AGGCTATACAGCTGGTGGAGATACCCGCTGCTGAAAGGCAGCAGTTCGAA
ACCTGGAGGCGCCTACAAGAAGGCTCGCAGCCGAACGGTCAGCCAGGCTC
GATCGGGGCTGCAGCCGCTGCTTTTAAGGACGCGTCCGGCAGATTCCATG
GCGAGACAACAGAAGACTTGCCTTCATATACCGCTCCGACGAATCAGCGA
GCTGAGATAACATCCGTTATCCTCGGTCTAAGGATGGCCTTGAAGAGATA
TGATCAACTACACTCTGACCCTTGGTTGGATGTCACGATCTACTCCGACT
CGGCATTTGCAGTTGACTGTATGGAAGAGTGGGTCTACAAGTGGATCAGG
AACGGATGGATGAATTGTAAAGGGAACGAGGTAGCAAATCGAGATCTCAT
TGAAGAAGCAGTGGTTCTCAGTGACCGGCTGAAGGAGAAGGGAGATGTGC
GTTATGTATGGATTCCAAGAGAGGAGAATCAGTATGTTGATAAGCTGTGC
AATGATTTGATGAACACTATGTGTTTAGTTGATAGGCTGTGCAATGACCT
GAAGAACGCTAGGTGTGACGAGCAAAGCTCCTCTTCTGATGACAGCTACT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004523RNA-DNA hybrid ribonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_41045CAN33_41045Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41045-T1.exon1CAN33_41045-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_41045-T1.exon2CAN33_41045-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_41045-T1.exon3CAN33_41045-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_41045-T1.exon4CAN33_41045-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41045-T1.cdsCAN33_41045-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41045-T1CAN33_41045-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR002156
DBxrefPFAM:PF00075
ProductRNase H family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3090830..3091901 +
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