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CAN33_41075-T1, CAN33_41075-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41075-T1
Unique NameCAN33_41075-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3106205..3107455-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41075-T1 ID=CAN33_41075-T1|Name=CAN33_41075-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1251bp|location=Sequence derived from alignment at NKJJ01000017.1:3106205..3107455- (Aspergillus niger FDAARGOS_311)
ATGTCTTTTCGCAAGAGAAATATTGGACTTTCGGCAGGCGCTGATCGCAC
CGGTGCCGTTAATGCTAACGCACAGCCGCAACAGCCTTCTGCGACGCCAG
AATTGACTCCCGGAGTTCGCCCCTCCCCCGACGACGGGCGCCCGACTACT
TCGACTGGTACTCCGTCGCTGGATAACCTTCTGGCTGGGCATGGAGGTCT
TCCCATCGGGAAGACACTGCTGATTGAGGAGAATGGAACTACGGATTTTG
CTGGTGCACTGCTAAGATACTATGCGGCAGAGGGTGTTGTGCAAGATCAA
AAGATTCATATCGTGGGAATGCCTGAACAATGGGGAAGAAGTCTTCCGGG
CTTGTTAGGCCCTGCTGATGCTATTGATGACAAGCAAGACAAACGGAAAG
GCGAGCGCATGAAGATCGCTTGGCGATACGAGCGTCTGGGCGAGTTCGGA
GCAGGAATTGCTGGTTCAAGAGGTATACTATCTTGTCATATTGTCACTGT
GAGAGTTTAGAGGTAGTGTGCTAACAGACACGATTCTGCAGCGCCCTCAG
GAGACCAGAGCCAATCTGCCGCAGACCCAAACGTGGACAAGCGACCAGCA
TTCTGCCATGCGTTTGACCTCACGAAACGTCTCACTCACCCATCCATAGC
CAACCTGAACTATATACCCCTCGCGCCATCGAACGAGCCTTTGTTTGTGT
CGATTCACAAACGTCTTCAAGCTGCAATTGCCTCTTGCCCGCCAAATACT
GTCCATCGCATCCTCATCCCTTCGTTATTAAATCCCACGATATACCCACC
CGATTCCTGCCAGCCCGACAACCTTCTACCGTTCCTACACTCCCTCAGGG
CTTTGATGAGCGCGCAGGGCGCACGGGTGACGGCGATGATCACTCTGCCC
TTGTCCCTTTTCCCCCGCGCCACGGGACTTGTGCGATGGATGGAATTGTT
GAGTGACGGTGTCATTGAATTGTGTCCCTTCCCGCACTCTTCTGATGCTC
TCGCAACCTCGGGTGCCGCTACTTCACAGGAGGAACCACCACAGGGCATG
CTGAAGGTCCATCGACTACCAGTACTGCACGAACGTGGCGGTGGTAGCGA
TCAGAACATCGGACAGGATTGGGCTTTCACGCTGAGCCGGAAGAAGTTCG
AAATCAAGCCGTTCAGCTTACCGCCAGCTGAAGGAGACAAGGAGGGGCAG
GATGCAGCGGTAACGGGTGGAATGCCAAAGAAGGCGGATCTTGAGTTCTA
A
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Coding sequence (CDS) from alignment at NKJJ01000017.1:3106205..3107455-

>CAN33_41075-T1 ID=CAN33_41075-T1|Name=CAN33_41075-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2364bp|location=Sequence derived from alignment at NKJJ01000017.1:3106205..3107455- (Aspergillus niger FDAARGOS_311)
CGCCCTCAGGAGACCAGAGCCAATCTGCCGCAGACCCAAACGTGGACAAG
CGACCAGCATTCTGCCATGCGTTTGACCTCACGAAACGTCTCACTCACCC
ATCCATAGCCAACCTGAACTATATACCCCTCGCGCCATCGAACGAGCCTT
TGTTTGTGTCGATTCACAAACGTCTTCAAGCTGCAATTGCCTCTTGCCCG
CCAAATACTGTCCATCGCATCCTCATCCCTTCGTTATTAAATCCCACGAT
ATACCCACCCGATTCCTGCCAGCCCGACAACCTTCTACCGTTCCTACACT
CCCTCAGGGCTTTGATGAGCGCGCAGGGCGCACGGGTGACGGCGATGATC
ACTCTGCCCTTGTCCCTTTTCCCCCGCGCCACGGGACTTGTGCGATGGAT
GGAATTGTTGAGTGACGGTGTCATTGAATTGTGTCCCTTCCCGCACTCTT
CTGATGCTCTCGCAACCTCGGGTGCCGCTACTTCACAGGAGGAACCACCA
CAGGGCATGCTGAAGGTCCATCGACTACCAGTACTGCACGAACGTGGCGG
TGGTAGCGATCAGAACATCGGACAGGATTGGGCTTTCACGCTGAGCCGGA
AGAAGTTCGAAATCAAGCCGTTCAGCTTACCGCCAGCTGAAGGAGACAAG
GAGGGGCAGGATGCAGCGGTAACGGGTGGAATGCCAAAGAAGGCGGATCT
TGAGTTCTAAATGTCTTTTCGCAAGAGAAATATTGGACTTTCGGCAGGCG
CTGATCGCACCGGTGCCGTTAATGCTAACGCACAGCCGCAACAGCCTTCT
GCGACGCCAGAATTGACTCCCGGAGTTCGCCCCTCCCCCGACGACGGGCG
CCCGACTACTTCGACTGGTACTCCGTCGCTGGATAACCTTCTGGCTGGGC
ATGGAGGTCTTCCCATCGGGAAGACACTGCTGATTGAGGAGAATGGAACT
ACGGATTTTGCTGGTGCACTGCTAAGATACTATGCGGCAGAGGGTGTTGT
GCAAGATCAAAAGATTCATATCGTGGGAATGCCTGAACAATGGGGAAGAA
GTCTTCCGGGCTTGTTAGGCCCTGCTGATGCTATTGATGACAAGCAAGAC
AAACGGAAAGGCGAGCGCATGAAGATCGCTTGGCGATACGAGCGTCTGGG
CGAGTTCGGAGCAGGAATTGCTGGTTCAAGAGCGCCCTCAGGAGACCAGA
GCCAATCTGCCGCAGACCCAAACGTGGACAAGCGACCAGCATTCTGCCAT
GCGTTTGACCTCACGAAACGTCTCACTCACCCATCCATAGCCAACCTGAA
CTATATACCCCTCGCGCCATCGAACGAGCCTTTGTTTGTGTCGATTCACA
AACGTCTTCAAGCTGCAATTGCCTCTTGCCCGCCAAATACTGTCCATCGC
ATCCTCATCCCTTCGTTATTAAATCCCACGATATACCCACCCGATTCCTG
CCAGCCCGACAACCTTCTACCGTTCCTACACTCCCTCAGGGCTTTGATGA
GCGCGCAGGGCGCACGGGTGACGGCGATGATCACTCTGCCCTTGTCCCTT
TTCCCCCGCGCCACGGGACTTGTGCGATGGATGGAATTGTTGAGTGACGG
TGTCATTGAATTGTGTCCCTTCCCGCACTCTTCTGATGCTCTCGCAACCT
CGGGTGCCGCTACTTCACAGGAGGAACCACCACAGGGCATGCTGAAGGTC
CATCGACTACCAGTACTGCACGAACGTGGCGGTGGTAGCGATCAGAACAT
CGGACAGGATTGGGCTTTCACGCTGAGCCGGAAGAAGTTCGAAATCAAGC
CGTTCAGCTTACCGCCAGCTGAAGGAGACAAGGAGGGGCAGGATGCAGCG
GTAACGGGTGGAATGCCAAAGAAGGCGGATCTTGAGTTCTAAATGTCTTT
TCGCAAGAGAAATATTGGACTTTCGGCAGGCGCTGATCGCACCGGTGCCG
TTAATGCTAACGCACAGCCGCAACAGCCTTCTGCGACGCCAGAATTGACT
CCCGGAGTTCGCCCCTCCCCCGACGACGGGCGCCCGACTACTTCGACTGG
TACTCCGTCGCTGGATAACCTTCTGGCTGGGCATGGAGGTCTTCCCATCG
GGAAGACACTGCTGATTGAGGAGAATGGAACTACGGATTTTGCTGGTGCA
CTGCTAAGATACTATGCGGCAGAGGGTGTTGTGCAAGATCAAAAGATTCA
TATCGTGGGAATGCCTGAACAATGGGGAAGAAGTCTTCCGGGCTTGTTAG
GCCCTGCTGATGCTATTGATGACAAGCAAGACAAACGGAAAGGCGAGCGC
ATGAAGATCGCTTGGCGATACGAGCGTCTGGGCGAGTTCGGAGCAGGAAT
TGCTGGTTCAAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033588Elongator holoenzyme complex
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_41075CAN33_41075Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41075-T1CAN33_41075-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41075-T1.cdsCAN33_41075-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41075-T1.exon2CAN33_41075-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_41075-T1.exon1CAN33_41075-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR008728
DBxrefPFAM:PF05625
ProductPAXNEB protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3106205..3107455 -
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