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CAN33_41080-T1, CAN33_41080-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41080-T1
Unique NameCAN33_41080-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3107740..3108268+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41080-T1 ID=CAN33_41080-T1|Name=CAN33_41080-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=529bp|location=Sequence derived from alignment at NKJJ01000017.1:3107740..3108268+ (Aspergillus niger FDAARGOS_311)
ATGTCCGACCCGGTACTTTTCGAAGACACCTTCACAATCACCACCATCAA
CTCCCAGAAATATGACCGTGTTTCGCGTCTGAGCTGCAACTCCACTGATA
CCCTCTCGCACTTCACCCTCGATGTCAACTCCGAGCTTTACCCTTGCGTC
GTTGGCGAGTCTGTGAACATGGCTCTGGCCTCGACGCTTTCTCTGGATGG
CAAGGATGACTCCGGATCGAAGGGCTGGAGAGAGGTTGGAATGGGCGAGC
AGACCTTGGCCAACGACTACGATTATGTCTGCCACGGCAAGGTTTACCGC
TTCGAGGAGGGTTCGAGTCAGGGTAACATGTAAGATTTCCTGTGTCACGT
ATCGCGGTCTGTTGCGGACTTCGCGATGTGACCGAGATTATTATCGATCA
ACAACTGACTAAATCGTGTCTAGGGCCGTTTTCATCTCTTTCGGTGGACT
TTTGCTTTACCTCGAAGGTCCTTACAAGAAGTTGGCCCCCTTGAGGATCG
ACTACGTGTATCTGCTCCTGAAGAAATAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:3107740..3108268+

>CAN33_41080-T1 ID=CAN33_41080-T1|Name=CAN33_41080-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=870bp|location=Sequence derived from alignment at NKJJ01000017.1:3107740..3108268+ (Aspergillus niger FDAARGOS_311)
ATGTCCGACCCGGTACTTTTCGAAGACACCTTCACAATCACCACCATCAA
CTCCCAGAAATATGACCGTGTTTCGCGTCTGAGCTGCAACTCCACTGATA
CCCTCTCGCACTTCACCCTCGATGTCAACTCCGAGCTTTACCCTTGCGTC
GTTGGCGAGTCTGTGAACATGGCTCTGGCCTCGACGCTTTCTCTGGATGG
CAAGGATGACTCCGGATCGAAGGGCTGGAGAGAGGTTGGAATGGGCGAGC
AGACCTTGGCCAACGACTACGATTATGTCTGCCACGGCAAGGTTTACCGC
TTCGAGGAGGGTTCGAGTCAGGGTAACATGGCCGTTTTCATCTCTTTCGG
TGGACTTTTGCTTTACCTCGAAGGTCCTTACAAGAAGTTGGCCCCCTTGA
GGATCGACTACGTGTATCTGCTCCTGAAGAAATAGATGTCCGACCCGGTA
CTTTTCGAAGACACCTTCACAATCACCACCATCAACTCCCAGAAATATGA
CCGTGTTTCGCGTCTGAGCTGCAACTCCACTGATACCCTCTCGCACTTCA
CCCTCGATGTCAACTCCGAGCTTTACCCTTGCGTCGTTGGCGAGTCTGTG
AACATGGCTCTGGCCTCGACGCTTTCTCTGGATGGCAAGGATGACTCCGG
ATCGAAGGGCTGGAGAGAGGTTGGAATGGGCGAGCAGACCTTGGCCAACG
ACTACGATTATGTCTGCCACGGCAAGGTTTACCGCTTCGAGGAGGGTTCG
AGTCAGGGTAACATGGCCGTTTTCATCTCTTTCGGTGGACTTTTGCTTTA
CCTCGAAGGTCCTTACAAGAAGTTGGCCCCCTTGAGGATCGACTACGTGT
ATCTGCTCCTGAAGAAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_41080CAN33_41080Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41080-T1.exon1CAN33_41080-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_41080-T1.exon2CAN33_41080-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41080-T1.cdsCAN33_41080-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41080-T1CAN33_41080-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092652ZZ
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005570
DBxrefPFAM:PF03870
ProductRNA polymerase Rpb8 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3107740..3108268 +
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