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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:3126500..3127682+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_41120-T1 ID=CAN33_41120-T1|Name=CAN33_41120-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1183bp|location=Sequence derived from alignment at NKJJ01000017.1:3126500..3127682+ (Aspergillus niger FDAARGOS_311)
ATGCCTAAGCGCAGCAAGCTCCTTCAAGCTCTGGACGAGCACCGCGGCCG
CGACTACGAGGCCGAGAAGCAGAAGAAGCTCATCAAGGCGGCGAAGAAGA
AGACCACCGCTACCAAGGGTGAAGATGTGAAGGAGGCTGTTGTTGAAGAT
AAGAAGGAGGAGAAGAAGAAGGAGGAAGAAGTTGAGGAGGAATCCGAAGA
CGAAGAAACCCCCGAAGAAACCCCTCCGACGCCGAAGAAGAGGAAGAAGA
AGAAGAAGACGACGAAGAAGAAGCCGAAGAATCCGACATCCCCCTCAGCG
ACCTCAGCGACGACGAACGCGAAGACGTCGTCACCCACCAACGCCTCACA
ATCAACAACAGTGCCGCCATCACCAGCAGTCTAAAGCGCATCTCGTTCCT
CACCCCCGCGACTCCCTTCTCCGAGCACAACAGTCTCGTATCGCAGGAAC
CGATTGAAGTGCCCGACGCCAACGATGACCTGAACCGCGAACTGGCCTTC
TACAAGGTCTGCCAGGCGGCGGCGATGACGGCCCGGAGTACCCTGAAGAA
GGAAGGTGTGCCGTTTACGCGACCCGGCGATTACTTCGCCGAGATGGTGA
AGACGGATGAGCACATGGGCAAGATCAAGAAGAAGTTGTATGATGAGGCG
GCGGCGAAGAAGGCCGCGGCGGAGGCCAGGAAGCAGCGTGATTTGAAGAA
GTTTGGAAAGCAGGTGCAGGTTGCGAAGTTGCAGCAGAGGGCAAAGGAGA
AGAGGGAGACGTTGGAGAAGATTAATGCGTTGAAGAAGAGTATGTTTATC
CCGTGGTTTCATTTTCGGGTGGTTGGCCTTTGTGGGTTTGAAAGTGGTTG
CTAACTGTTTGGGTGTGTGCAGAGCGCAAGGCTGATACCGGCGGCCCTAC
TGATGATTCGTCCAACATGTTCGATGTCGCTATTGATGATGCTGCTCAGG
CGGGTGGTCGCAAGCGCGGTCGTGATGCCGAGGGTGGTCCGTCGATGAAG
CGCCAGAAGAAGAATGAGAAGTTCGGGTTCGGTGGTAAGAAGCGCTTTGC
TAAGAGCGGTGATGCTGTCTCGAGTGGTGATATGCGCGACTTCTCTGTCA
AGAAGATGAAGGGCGGTCCTAAGGGCGGTGGTGCCAAGCGGCCGGGCAAG
AGCAGGAGGGCTGCTGCTAAGGGCCGTTCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:3126500..3127682+ >CAN33_41120-T1 ID=CAN33_41120-T1|Name=CAN33_41120-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2682bp|location=Sequence derived from alignment at NKJJ01000017.1:3126500..3127682+ (Aspergillus niger FDAARGOS_311)
ATGCCTAAGCGCAGCAAGCTCCTTCAAGCTCTGGACGAGCACCGCGGCCG
CGACTACGAGGCCGAGAAGCAGAAGAAGCTCATCAAGGCGGCGAAGAAGA
AGACCACCGCTACCAAGGACGTCGTCACCCACCAACGCCTCACAATCAAC
AACAGTGCCGCCATCACCAGCAGTCTAAAGCGCATCTCGTTCCTCACCCC
CGCGACTCCCTTCTCCGAGCACAACAGTCTCGTATCGCAGGAACCGATTG
AAGTGCCCGACGCCAACGATGACCTGAACCGCGAACTGGCCTTCTACAAG
GTCTGCCAGGCGGCGGCGATGACGGCCCGGAGTACCCTGAAGAAGGAAGG
TGTGCCGTTTACGCGACCCGGCGATTACTTCGCCGAGATGGTGAAGACGG
ATGAGCACATGGGCAAGATCAAGAAGAAGTTGTATGATGAGGCGGCGGCG
AAGAAGGCCGCGGCGGAGGCCAGGAAGCAGCGTGATTTGAAGAAGTTTGG
AAAGCAGGTGCAGGTTGCGAAGTTGCAGCAGAGGGCAAAGGAGAAGAGGG
AGACGTTGGAGAAGATTAATGCGTTGAAGAAGAAGCGCAAGGCTGATACC
GGCGGCCCTACTGATGATTCGTCCAACATGTTCGATGTCGCTATTGATGA
TGCTGCTCAGGCGGGTGGTCGCAAGCGCGGTCGTGATGCCGAGGGTGGTC
CGTCGATGAAGCGCCAGAAGAAGAATGAGAAGTTCGGGTTCGGTGGTAAG
AAGCGCTTTGCTAAGAGCGGTGATGCTGTCTCGAGTGGTGATATGCGCGA
CTTCTCTGTCAAGAAGATGAAGGGCGGTCCTAAGGGCGGTGGTGCCAAGC
GGCCGGGCAAGAGCAGGAGGGCTGCTGCTAAGGGCCGTTCTTGAATGCCT
AAGCGCAGCAAGCTCCTTCAAGCTCTGGACGAGCACCGCGGCCGCGACTA
CGAGGCCGAGAAGCAGAAGAAGCTCATCAAGGCGGCGAAGAAGAAGACCA
CCGCTACCAAGGACGTCGTCACCCACCAACGCCTCACAATCAACAACAGT
GCCGCCATCACCAGCAGTCTAAAGCGCATCTCGTTCCTCACCCCCGCGAC
TCCCTTCTCCGAGCACAACAGTCTCGTATCGCAGGAACCGATTGAAGTGC
CCGACGCCAACGATGACCTGAACCGCGAACTGGCCTTCTACAAGGTCTGC
CAGGCGGCGGCGATGACGGCCCGGAGTACCCTGAAGAAGGAAGGTGTGCC
GTTTACGCGACCCGGCGATTACTTCGCCGAGATGGTGAAGACGGATGAGC
ACATGGGCAAGATCAAGAAGAAGTTGTATGATGAGGCGGCGGCGAAGAAG
GCCGCGGCGGAGGCCAGGAAGCAGCGTGATTTGAAGAAGTTTGGAAAGCA
GGTGCAGGTTGCGAAGTTGCAGCAGAGGGCAAAGGAGAAGAGGGAGACGT
TGGAGAAGATTAATGCGTTGAAGAAGAAGCGCAAGGCTGATACCGGCGGC
CCTACTGATGATTCGTCCAACATGTTCGATGTCGCTATTGATGATGCTGC
TCAGGCGGGTGGTCGCAAGCGCGGTCGTGATGCCGAGGGTGGTCCGTCGA
TGAAGCGCCAGAAGAAGAATGAGAAGTTCGGGTTCGGTGGTAAGAAGCGC
TTTGCTAAGAGCGGTGATGCTGTCTCGAGTGGTGATATGCGCGACTTCTC
TGTCAAGAAGATGAAGGGCGGTCCTAAGGGCGGTGGTGCCAAGCGGCCGG
GCAAGAGCAGGAGGGCTGCTGCTAAGGGCCGTTCTTGAATGCCTAAGCGC
AGCAAGCTCCTTCAAGCTCTGGACGAGCACCGCGGCCGCGACTACGAGGC
CGAGAAGCAGAAGAAGCTCATCAAGGCGGCGAAGAAGAAGACCACCGCTA
CCAAGGACGTCGTCACCCACCAACGCCTCACAATCAACAACAGTGCCGCC
ATCACCAGCAGTCTAAAGCGCATCTCGTTCCTCACCCCCGCGACTCCCTT
CTCCGAGCACAACAGTCTCGTATCGCAGGAACCGATTGAAGTGCCCGACG
CCAACGATGACCTGAACCGCGAACTGGCCTTCTACAAGGTCTGCCAGGCG
GCGGCGATGACGGCCCGGAGTACCCTGAAGAAGGAAGGTGTGCCGTTTAC
GCGACCCGGCGATTACTTCGCCGAGATGGTGAAGACGGATGAGCACATGG
GCAAGATCAAGAAGAAGTTGTATGATGAGGCGGCGGCGAAGAAGGCCGCG
GCGGAGGCCAGGAAGCAGCGTGATTTGAAGAAGTTTGGAAAGCAGGTGCA
GGTTGCGAAGTTGCAGCAGAGGGCAAAGGAGAAGAGGGAGACGTTGGAGA
AGATTAATGCGTTGAAGAAGAAGCGCAAGGCTGATACCGGCGGCCCTACT
GATGATTCGTCCAACATGTTCGATGTCGCTATTGATGATGCTGCTCAGGC
GGGTGGTCGCAAGCGCGGTCGTGATGCCGAGGGTGGTCCGTCGATGAAGC
GCCAGAAGAAGAATGAGAAGTTCGGGTTCGGTGGTAAGAAGCGCTTTGCT
AAGAGCGGTGATGCTGTCTCGAGTGGTGATATGCGCGACTTCTCTGTCAA
GAAGATGAAGGGCGGTCCTAAGGGCGGTGGTGCCAAGCGGCCGGGCAAGA
GCAGGAGGGCTGCTGCTAAGGGCCGTTCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265GXF |
| DBxref | InterPro:IPR008610 |
| DBxref | PFAM:PF05890 |
| Product | Eukaryotic rRNA processing protein EBP2 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:3126500..3127682 + |
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