CAN33_41155-T1, CAN33_41155-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_41155-T1
Unique Name	CAN33_41155-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3143601..3145770+
coding sequence from alignment at NKJJ01000017.1:3143601..3145770+

mRNA from alignment at NKJJ01000017.1:3143601..3145770+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_41155-T1 ID=CAN33_41155-T1|Name=CAN33_41155-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2170bp|location=Sequence derived from alignment at NKJJ01000017.1:3143601..3145770+ (Aspergillus niger FDAARGOS_311)
ATGAAGCGCAAAGCTGCATTCCAGCTGCCTCATACCCCCCGACGCGCTCC
GCGGCAGGACCCCGTGTCTTGCGACTCTTGTCGGCTCAAGAAGATTAAAT
GCGATCGCCAGCAGCCATGCAGCAGTTGCTCTGCGCGCCGGTTGACATGC
CGTTATGGAAAGCCAGAAGCTGCAGGTACCGCAAGGGTTCAAAAACCACT
ATTAGCAGCTGGTGTGGAGCGGACATCCCCTCCCAGTAACCCAACTGTGC
CTCCAAGAGCCGATAACGTGCCTATTGAGCCCACTGCAGCTCCATTGCGG
GCGTGCAATCGGGAGTCGCTGCTCACAGCGGACTGGCTGGAGAACATTCA
CATGGCTGACCGGGTACCAACAGCAACCCCGAAATGGCTGCGAGATGGAT
TGGATGATCCAGTAAGAGGGCGCAACTTAAACTTAAGCCTAAACGATGAG
ACGGGTTCTGCAAGACCCCTACTGTCAATGCCATACATGAATCGATCCGC
TATCGATGAGAATCCGGCGTCGATCAATTTGATCACCTTTGTACCCGCGA
AATCGGAGGCTCTGGATCTCTTTCGATACTATCATCGTTACGTCGACTAT
CTCTACCATATCATCGTCCCAAAGCGTGTCGAGGGCCAGATAAATGGGAT
TTATCGTTGTATTGAAAGCAATGCGCCCGTGGATCTCAACCACTTGGCGC
TGCTTTTCGGCATTCTAGCCAGCTCTCTATGTCTACAACGATCAGTGGTG
GCATCTACTGATGCAGAAGCGCGCAGCCAAGAGTTTGCCTTTCTCACTGG
CGCTGCATTAATTCAAAGCCACTACTCTCTGTCTCCAACTCTTGTGGGCT
TGCAGGCAACCATGGTGGTCATGCATAATGTCTCTAACTGGAACATTCCA
CCATCCGTGAGCGGTCTCTTCGTACATGGTGCGATAGTCAGCCAAGCGAA
GAGTCTCATGCTGCACTGCATCGACTCCCCGCGCTTTCGGAATGAGAGAG
AGGGAAGTGATTACGATGCAATAGATCTTGAAGTCAAGAGACGACTATGG
TGGGATCTGACGTCTTTCGACTGGTAAGAGGTATTCGAGTGATGGATGGT
CATGGCTGATTAACAATTGCAGGCTACTGGGCTTTCTTACTGGCCCTCAA
GAGTGGACGTACCTCATCCAGCCGCACCACATGAACGTGAACCAGCCATT
GAATATCGATGATAATGCAATGTGCCACAACATGGTTTCAATGCCAAACT
CCACACCAACAGACATGTCCTTTTTCCTTCAACGCCTGACCCTAGCTGCT
GTGAGCCGGGAGGTAGTTGATGCAACATCCTACGAGCATCTCCATGGCTT
AGAGCCAATTTACGAAAAAATACTCGAGCTAGACAAAAAGTTCCATCGAG
CCGTGGCGGAGATTCCTGACTTCTTCCGCCTGGATCCATCATCCAGACGA
CGGTTTGCTTCGCTCTACGAAGAGCGTCCGACCATTGCCTGGCAAGGCTG
TCTCCTACAACAAGGCTTCTTCTCCCGCTTATGCCGTCTGCATCGAGATT
TCTTCATCAGAGGAGCTCGTGAACCAGCATATTCCTATTCCCACGTGATC
TGCCTGCAGTCTGCCCGGAAAGTGCTCGAGATTAAAAGAATCATGGATGG
AAACGAACCGAACTACACCCCACCGAACTCTGTCGTCTGGTCCGTAATGC
ATCATGTATTCGCTGCTGCTGTGATATTATTACTGGACGTGTGCTTCAAT
TGGGATGATATTCTAGCCGAGAAGCGAAAAGAAGAAGTGCTGGATGCCTG
CCGCATGCTGAGCAAGGCACAAGAGTCGTCTGCCCTGGTCAGGGAAGGAA
TCAACGCAATGATGGGTGTGTTGCAAAAGCATTGGAGAACCGGAAAGCAG
GCTGAAAATCACACTATTATTTCACAAGGGGCGGATGGAGCGCGATCTCA
TCCTGGCTCTGCACCGGCTCATGTCCCAGCTCTCAATGCTGAATCAAACG
TCATGCCGCCACACCTCCCAGCTGCCACCAATGACAATGCACCTCATGAG
AGGCAGCTGGAAGATATCTGGACCGAGATGCTTGAGACGGGTAACGACCT
GGCTCTGGATTCTGCAGACTGGACGGAACTGTTGAATGAGCTGACAGACC
CGGAGCTATCTCGAGGATGA

Coding sequence (CDS) from alignment at NKJJ01000017.1:3143601..3145770+

>CAN33_41155-T1 ID=CAN33_41155-T1|Name=CAN33_41155-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4242bp|location=Sequence derived from alignment at NKJJ01000017.1:3143601..3145770+ (Aspergillus niger FDAARGOS_311)
ATGAAGCGCAAAGCTGCATTCCAGCTGCCTCATACCCCCCGACGCGCTCC
GCGGCAGGACCCCGTGTCTTGCGACTCTTGTCGGCTCAAGAAGATTAAAT
GCGATCGCCAGCAGCCATGCAGCAGTTGCTCTGCGCGCCGGTTGACATGC
CGTTATGGAAAGCCAGAAGCTGCAGGTACCGCAAGGGTTCAAAAACCACT
ATTAGCAGCTGGTGTGGAGCGGACATCCCCTCCCAGTAACCCAACTGTGC
CTCCAAGAGCCGATAACGTGCCTATTGAGCCCACTGCAGCTCCATTGCGG
GCGTGCAATCGGGAGTCGCTGCTCACAGCGGACTGGCTGGAGAACATTCA
CATGGCTGACCGGGTACCAACAGCAACCCCGAAATGGCTGCGAGATGGAT
TGGATGATCCAGTAAGAGGGCGCAACTTAAACTTAAGCCTAAACGATGAG
ACGGGTTCTGCAAGACCCCTACTGTCAATGCCATACATGAATCGATCCGC
TATCGATGAGAATCCGGCGTCGATCAATTTGATCACCTTTGTACCCGCGA
AATCGGAGGCTCTGGATCTCTTTCGATACTATCATCGTTACGTCGACTAT
CTCTACCATATCATCGTCCCAAAGCGTGTCGAGGGCCAGATAAATGGGAT
TTATCGTTGTATTGAAAGCAATGCGCCCGTGGATCTCAACCACTTGGCGC
TGCTTTTCGGCATTCTAGCCAGCTCTCTATGTCTACAACGATCAGTGGTG
GCATCTACTGATGCAGAAGCGCGCAGCCAAGAGTTTGCCTTTCTCACTGG
CGCTGCATTAATTCAAAGCCACTACTCTCTGTCTCCAACTCTTGTGGGCT
TGCAGGCAACCATGGTGGTCATGCATAATGTCTCTAACTGGAACATTCCA
CCATCCGTGAGCGGTCTCTTCGTACATGGTGCGATAGTCAGCCAAGCGAA
GAGTCTCATGCTGCACTGCATCGACTCCCCGCGCTTTCGGAATGAGAGAG
AGGGAAGTGATTACGATGCAATAGATCTTGAAGTCAAGAGACGACTATGG
TGGGATCTGACGTCTTTCGACTGGCTACTGGGCTTTCTTACTGGCCCTCA
AGAGTGGACGTACCTCATCCAGCCGCACCACATGAACGTGAACCAGCCAT
TGAATATCGATGATAATGCAATGTGCCACAACATGGTTTCAATGCCAAAC
TCCACACCAACAGACATGTCCTTTTTCCTTCAACGCCTGACCCTAGCTGC
TGTGAGCCGGGAGGTAGTTGATGCAACATCCTACGAGCATCTCCATGGCT
TAGAGCCAATTTACGAAAAAATACTCGAGCTAGACAAAAAGTTCCATCGA
GCCGTGGCGGAGATTCCTGACTTCTTCCGCCTGGATCCATCATCCAGACG
ACGGTTTGCTTCGCTCTACGAAGAGCGTCCGACCATTGCCTGGCAAGGCT
GTCTCCTACAACAAGGCTTCTTCTCCCGCTTATGCCGTCTGCATCGAGAT
TTCTTCATCAGAGGAGCTCGTGAACCAGCATATTCCTATTCCCACGTGAT
CTGCCTGCAGTCTGCCCGGAAAGTGCTCGAGATTAAAAGAATCATGGATG
GAAACGAACCGAACTACACCCCACCGAACTCTGTCGTCTGGTCCGTAATG
CATCATGTATTCGCTGCTGCTGTGATATTATTACTGGACGTGTGCTTCAA
TTGGGATGATATTCTAGCCGAGAAGCGAAAAGAAGAAGTGCTGGATGCCT
GCCGCATGCTGAGCAAGGCACAAGAGTCGTCTGCCCTGGTCAGGGAAGGA
ATCAACGCAATGATGGGTGTGTTGCAAAAGCATTGGAGAACCGGAAAGCA
GGCTGAAAATCACACTATTATTTCACAAGGGGCGGATGGAGCGCGATCTC
ATCCTGGCTCTGCACCGGCTCATGTCCCAGCTCTCAATGCTGAATCAAAC
GTCATGCCGCCACACCTCCCAGCTGCCACCAATGACAATGCACCTCATGA
GAGGCAGCTGGAAGATATCTGGACCGAGATGCTTGAGACGGGTAACGACC
TGGCTCTGGATTCTGCAGACTGGACGGAACTGTTGAATGAGCTGACAGAC
CCGGAGCTATCTCGAGGATGAATGAAGCGCAAAGCTGCATTCCAGCTGCC
TCATACCCCCCGACGCGCTCCGCGGCAGGACCCCGTGTCTTGCGACTCTT
GTCGGCTCAAGAAGATTAAATGCGATCGCCAGCAGCCATGCAGCAGTTGC
TCTGCGCGCCGGTTGACATGCCGTTATGGAAAGCCAGAAGCTGCAGGTAC
CGCAAGGGTTCAAAAACCACTATTAGCAGCTGGTGTGGAGCGGACATCCC
CTCCCAGTAACCCAACTGTGCCTCCAAGAGCCGATAACGTGCCTATTGAG
CCCACTGCAGCTCCATTGCGGGCGTGCAATCGGGAGTCGCTGCTCACAGC
GGACTGGCTGGAGAACATTCACATGGCTGACCGGGTACCAACAGCAACCC
CGAAATGGCTGCGAGATGGATTGGATGATCCAGTAAGAGGGCGCAACTTA
AACTTAAGCCTAAACGATGAGACGGGTTCTGCAAGACCCCTACTGTCAAT
GCCATACATGAATCGATCCGCTATCGATGAGAATCCGGCGTCGATCAATT
TGATCACCTTTGTACCCGCGAAATCGGAGGCTCTGGATCTCTTTCGATAC
TATCATCGTTACGTCGACTATCTCTACCATATCATCGTCCCAAAGCGTGT
CGAGGGCCAGATAAATGGGATTTATCGTTGTATTGAAAGCAATGCGCCCG
TGGATCTCAACCACTTGGCGCTGCTTTTCGGCATTCTAGCCAGCTCTCTA
TGTCTACAACGATCAGTGGTGGCATCTACTGATGCAGAAGCGCGCAGCCA
AGAGTTTGCCTTTCTCACTGGCGCTGCATTAATTCAAAGCCACTACTCTC
TGTCTCCAACTCTTGTGGGCTTGCAGGCAACCATGGTGGTCATGCATAAT
GTCTCTAACTGGAACATTCCACCATCCGTGAGCGGTCTCTTCGTACATGG
TGCGATAGTCAGCCAAGCGAAGAGTCTCATGCTGCACTGCATCGACTCCC
CGCGCTTTCGGAATGAGAGAGAGGGAAGTGATTACGATGCAATAGATCTT
GAAGTCAAGAGACGACTATGGTGGGATCTGACGTCTTTCGACTGGCTACT
GGGCTTTCTTACTGGCCCTCAAGAGTGGACGTACCTCATCCAGCCGCACC
ACATGAACGTGAACCAGCCATTGAATATCGATGATAATGCAATGTGCCAC
AACATGGTTTCAATGCCAAACTCCACACCAACAGACATGTCCTTTTTCCT
TCAACGCCTGACCCTAGCTGCTGTGAGCCGGGAGGTAGTTGATGCAACAT
CCTACGAGCATCTCCATGGCTTAGAGCCAATTTACGAAAAAATACTCGAG
CTAGACAAAAAGTTCCATCGAGCCGTGGCGGAGATTCCTGACTTCTTCCG
CCTGGATCCATCATCCAGACGACGGTTTGCTTCGCTCTACGAAGAGCGTC
CGACCATTGCCTGGCAAGGCTGTCTCCTACAACAAGGCTTCTTCTCCCGC
TTATGCCGTCTGCATCGAGATTTCTTCATCAGAGGAGCTCGTGAACCAGC
ATATTCCTATTCCCACGTGATCTGCCTGCAGTCTGCCCGGAAAGTGCTCG
AGATTAAAAGAATCATGGATGGAAACGAACCGAACTACACCCCACCGAAC
TCTGTCGTCTGGTCCGTAATGCATCATGTATTCGCTGCTGCTGTGATATT
ATTACTGGACGTGTGCTTCAATTGGGATGATATTCTAGCCGAGAAGCGAA
AAGAAGAAGTGCTGGATGCCTGCCGCATGCTGAGCAAGGCACAAGAGTCG
TCTGCCCTGGTCAGGGAAGGAATCAACGCAATGATGGGTGTGTTGCAAAA
GCATTGGAGAACCGGAAAGCAGGCTGAAAATCACACTATTATTTCACAAG
GGGCGGATGGAGCGCGATCTCATCCTGGCTCTGCACCGGCTCATGTCCCA
GCTCTCAATGCTGAATCAAACGTCATGCCGCCACACCTCCCAGCTGCCAC
CAATGACAATGCACCTCATGAGAGGCAGCTGGAAGATATCTGGACCGAGA
TGCTTGAGACGGGTAACGACCTGGCTCTGGATTCTGCAGACTGGACGGAA
CTGTTGAATGAGCTGACAGACCCGGAGCTATCTCGAGGATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_41155	CAN33_41155	Aspergillus niger FDAARGOS_311	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_41155-T1.exon1	CAN33_41155-T1.exon1	Aspergillus niger FDAARGOS_311	exon
CAN33_41155-T1.exon2	CAN33_41155-T1.exon2	Aspergillus niger FDAARGOS_311	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_41155-T1.cds	CAN33_41155-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_41155-T1	CAN33_41155-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

Properties


Property Name	Value
Note	antiSMASH:Cluster_10000171.7
Note	EggNog:ENOG41
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
Product	Fungal Zn(2)-Cys(6) binuclear cluster domain family protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000017.1	supercontig	NKJJ01000017.1:3143601..3145770 +

Main menu

You are here

CAN33_41155-T1, CAN33_41155-T1 (mRNA) Aspergillus niger FDAARGOS_311

Main menu

User login

You are here

CAN33_41155-T1, CAN33_41155-T1 (mRNA) Aspergillus niger FDAARGOS_311