You are here

CAN33_41220-T1, CAN33_41220-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41220-T1
Unique NameCAN33_41220-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3184229..3185481+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41220-T1 ID=CAN33_41220-T1|Name=CAN33_41220-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1253bp|location=Sequence derived from alignment at NKJJ01000017.1:3184229..3185481+ (Aspergillus niger FDAARGOS_311)
ATGTCCAATAATCTCACCTGCAAACCCTCTATCTCAGCCTCCTCACTCGG CGAAGTCCGCAAAATCTACATGTCGAAAATGACCCAGCGGGGGTGCTCCC AGACCTTGAAGGATAAATGCCGCGATATATGGCACGACGTGATCAATGAT GCTATTGATGCGGAAGCCGAATGTTCTATGAGGGGGATTGCAATTGTGCA CGAAAAGAAACAGGAACCTGCGTACATTCAGAGCAAGGAAAACTGAAAGA AGGACAGCAGCGAGGGAGACACCGAGTCTGAGACGGAAAGTGAGGAGAGC AATTCCGAGACGGAAGTGGAAATCGATCCGAGTCTTGATGGCAGTGAATG CGAATGTGCGTCTGGGTGTGCGTGCGCGTGTGCTTGTTGCCGGGTGGAGT ATCCGGAGAGTTTGGTGGAGAGTGGTGGGAGCGAGGCGGAGAGTTTACTT TCTTGTGGGTTGGATGGAGGGGAGGGGGACGATGAGTAGTATTGGTTTTT GTTTGGAGGTGGATTTGGATATTGGGGGTTTGGTAGGGAAGGGAATTTCC GGATTTGGGGGTTTGGGGATGGTGTTTTGATATTAAGAGGAGAGTTCCGG GGGACAGAGATGTTGATGAATTTAGGACTGCAATCTCGAGTGTCAGCTTG ATAACTTAAATATGGCTGTTATATCCTTCTAATCTTATGTCCCATTCATA TTCTATGTAACTTGGACCGATCGACTCGAGCTCTCCCACTCACCATTCGA TACATCGTGTTCACCACTTACCCCTTAGCATCAACCTCAACAACATGCCC TCCCCATCAAGAGAATTCAGCCCCGAGGACCTCGACGACCTCGCAAATGA CTTGAAAGACATACAGGAAGGACTGGCTCCGAGCATCCACTACTTCATAT CCTTCCAAACTGGCGCATTGTTGGATCACCTTGACGAGGTTCGCGATGCT CTGGACCTGCAGCTAATTAACCTCACAGAAATGCTGGATCGACTGAAGAG AGGCTTGGATCAGGTAAAGGCTATCAGGAAGACTGTCAAAGCTGAGGAGA ATGAAACCTCGGAAGATGAGGAGGTGAAGGAAAGTGAGCAGCATCCGCAT CAGCATCATGCGACAAAGAGTCCGGTGGCGAAGAGTCCGAAACATCGTTT CTCTCCTGCTGCGAAGGTTAAGGTGCAGGAAAGCGACGGGGATGCGGACT CGGAGCGTGAAATTGAGGCTGAAAAGGAGGATTTTGAGACTTTGTTCCAG TAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:3184229..3185481+

>CAN33_41220-T1 ID=CAN33_41220-T1|Name=CAN33_41220-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1392bp|location=Sequence derived from alignment at NKJJ01000017.1:3184229..3185481+ (Aspergillus niger FDAARGOS_311)
ATGTCCAATAATCTCACCTGCAAACCCTCTATCTCAGCCTCCTCACTCGG
CGAAGTCCGCAAAATCTACATGTCGAAAATGACCCAGCGGGGGTGCTCCC
AGACCTTGAAGGATAAATGCCGCGATATATGGCACGACGTGATCAATGAT
GCTATTGATGCGGAAGCCGAATGTTCTATGAGGGGGATTGCAATTGTGCA
CGAAAAGAAACAGGAACCTGCCATCAACCTCAACAACATGCCCTCCCCAT
CAAGAGAATTCAGCCCCGAGGACCTCGACGACCTCGCAAATGACTTGAAA
GACATACAGGAAGGACTGGCTCCGAGCATCCACTACTTCATATCCTTCCA
AACTGGCGCATTGTTGGATCACCTTGACGAGGTTCGCGATGCTCTGGACC
TGCAGCTAATTAACCTCACAGAAATGCTGGATCGACTGAAGAGAGGCTTG
GATCAGGTAAAGGCTATCAGGAAGACTGTCAAAGCTGAGGAGAATGAAAC
CTCGGAAGATGAGGAGGTGAAGGAAAGTGAGCAGCATCCGCATCAGCATC
ATGCGACAAAGAGTCCGGTGGCGAAGAGTCCGAAACATCGTTTCTCTCCT
GCTGCGAAGGTTAAGGTGCAGGAAAGCGACGGGGATGCGGACTCGGAGCG
TGAAATTGAGGCTGAAAAGGAGGATTTTGAGACTTTGTTCCAGTAGATGT
CCAATAATCTCACCTGCAAACCCTCTATCTCAGCCTCCTCACTCGGCGAA
GTCCGCAAAATCTACATGTCGAAAATGACCCAGCGGGGGTGCTCCCAGAC
CTTGAAGGATAAATGCCGCGATATATGGCACGACGTGATCAATGATGCTA
TTGATGCGGAAGCCGAATGTTCTATGAGGGGGATTGCAATTGTGCACGAA
AAGAAACAGGAACCTGCCATCAACCTCAACAACATGCCCTCCCCATCAAG
AGAATTCAGCCCCGAGGACCTCGACGACCTCGCAAATGACTTGAAAGACA
TACAGGAAGGACTGGCTCCGAGCATCCACTACTTCATATCCTTCCAAACT
GGCGCATTGTTGGATCACCTTGACGAGGTTCGCGATGCTCTGGACCTGCA
GCTAATTAACCTCACAGAAATGCTGGATCGACTGAAGAGAGGCTTGGATC
AGGTAAAGGCTATCAGGAAGACTGTCAAAGCTGAGGAGAATGAAACCTCG
GAAGATGAGGAGGTGAAGGAAAGTGAGCAGCATCCGCATCAGCATCATGC
GACAAAGAGTCCGGTGGCGAAGAGTCCGAAACATCGTTTCTCTCCTGCTG
CGAAGGTTAAGGTGCAGGAAAGCGACGGGGATGCGGACTCGGAGCGTGAA
ATTGAGGCTGAAAAGGAGGATTTTGAGACTTTGTTCCAGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_41220CAN33_41220Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41220-T1.exon1CAN33_41220-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_41220-T1.exon2CAN33_41220-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41220-T1.cdsCAN33_41220-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41220-T1CAN33_41220-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3184229..3185481 +