You are here

Home

CAN33_41265-T1, CAN33_41265-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41265-T1
Unique NameCAN33_41265-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3214299..3216092+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41265-T1 ID=CAN33_41265-T1|Name=CAN33_41265-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1794bp|location=Sequence derived from alignment at NKJJ01000017.1:3214299..3216092+ (Aspergillus niger FDAARGOS_311)
ATGGCATCCGCAACACAGACTCAAGAGATCGAAATCGCGCCTGTATCCAC
CACCCAGAACAACACCATTGGCCCCGATATCTCAACCAACTCCAGCACCC
GCAAGCCACCACCGTCCACAGTTAACAATGAACAATGTAATAATTCTGTC
CCCAACCCCAATCAAACAGCCAACACCATTAACAACAAAACAACCATAAC
ATGCACAATGCTCTCCCTGTGCCTCTCCGTGCTTCTCTCCGCCCTCGACC
TTACAATCATCACCACCGCCATCCCTTCCATAGTAGGTACCTTAAACTCC
GCCACCGGCTACACCTGGATAGGCGGCGCCTACACCCTCGCCTACGCCGC
TGTAACACCCATCTGGGGAACCGTCGCCGACATATGGGGCCGGAAGCCCG
TCATTTTGATTGCCATGGCTGTCTTCCTTGGGGGTAGTCTGCTATGCGCG
CTAGCACCGTCTATGGACATCTTGCTCGCTGGTCGGGTGTTTCAGGGTCT
AGGTGGCTCCGGCATGGGGATTATGGTTAATATCATCATAAGTGATTTGT
TTTCACTACGAGACAGGGGGCTCTACCTTGCCATCACTTCGTTAGTATGG
GCTGTCGGAAGTGCTGTCGGTCCTGTGCTGGGAGGCGTCTTTGCGACCAA
GCTCAGTTGGCGATGGTGTTTCTGGATCAACTGTAAGACCACACCCACCA
TTCCACCCATAGCGTAAATACTGATTAACCACAGTACCTATCGGCGCCAT
CTCCTTCACCGTCCTCCTTCTCTACCTCCACGTCCCCAACCCCCGAACCC
CCTAACAACAGGCCTAAAAGCCATCGACTGGACCGGTATCCTCCTAATCG
TCGGCTCCGCACTCATGATCCTCCTCGCCCTCGACCTAGGCGATGTAGTC
TATCCCTGGTCCTCAGCGACCATAATCTGCCTGATAATATTCGGCATCCT
ATGCATGGGTCTCTTCGGAGTAAACGAATACAAACTTGCCCGCAACCCCG
TCATCCCATTCTGGCTCTTCTCTTCACCTACAAAAGCAGCCCCTTATATC
GTCTTCGCGTGTAACAACTACGTCTTTATTGGGCTGGCATATTACTTACC
ATTATATGCACAGTCCGTGCTAGGCGCAAGCGCACTAGCCTCAGGCCTCT
ACCTCCTCCCACTGATAGTCTCCTGCGCACTAGCTGCAGCTGCCGCAGGG
GTATACATGCAACAGACAGGACGGTACATACCGGTCATGTACATCGCGCA
GATACTCCTCATGATAGGCACTGGTCTCCTAATCGACCTCCGCTTCGAGA
CCTCACTTACCCGTCTTATCATCTTTCAAACACTCGCTGGAATCGGAGTA
GGCATGAACATCGAAGCACCAATCCTCGCCGCCCAGGCAGCTACCACCGT
CCGGGACACCGCCGCAGTCACAGCGACAATGGGATTCGTCCGCTCGCTTG
CAACAGCTATAGCAGTAGTAGTTGGGGGCGTGGTATTTCAGAATGAGATG
ACATCTGCTAATGGTGCACTGACTGATAGACTTGATGGTGATGGTGCATT
AGCGAAGGAGTTTAATGGGGACCTTGCGGCGTCAAATGTGGAGCGAATTG
GTGCGCTCGAGGAGAGTGAACAGATCATTGTGAGGGAGACGTACTTTCAG
GCTCTGCGAATGGTCTGGGTTATGTATGTTGCGTTTGCGGGGTTGGCGTC
GGTGATTACGCTGTTTGTGAGGGCTCATGACTTGAGGAGGGAGAATGAGG
GTGCCGTGTTGGGGGTGGAGAGGGGCGGGGGGATAGTCGGTTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:3214299..3216092+

>CAN33_41265-T1 ID=CAN33_41265-T1|Name=CAN33_41265-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3450bp|location=Sequence derived from alignment at NKJJ01000017.1:3214299..3216092+ (Aspergillus niger FDAARGOS_311)
ATGGCATCCGCAACACAGACTCAAGAGATCGAAATCGCGCCTGTATCCAC
CACCCAGAACAACACCATTGGCCCCGATATCTCAACCAACTCCAGCACCC
GCAAGCCACCACCGTCCACAGTTAACAATGAACAATGTAATAATTCTGTC
CCCAACCCCAATCAAACAGCCAACACCATTAACAACAAAACAACCATAAC
ATGCACAATGCTCTCCCTGTGCCTCTCCGTGCTTCTCTCCGCCCTCGACC
TTACAATCATCACCACCGCCATCCCTTCCATAGTAGGTACCTTAAACTCC
GCCACCGGCTACACCTGGATAGGCGGCGCCTACACCCTCGCCTACGCCGC
TGTAACACCCATCTGGGGAACCGTCGCCGACATATGGGGCCGGAAGCCCG
TCATTTTGATTGCCATGGCTGTCTTCCTTGGGGGTAGTCTGCTATGCGCG
CTAGCACCGTCTATGGACATCTTGCTCGCTGGTCGGGTGTTTCAGGGTCT
AGGTGGCTCCGGCATGGGGATTATGGTTAATATCATCATAAGTGATTTGT
TTTCACTACGAGACAGGGGGCTCTACCTTGCCATCACTTCGTTAGTATGG
GCTGTCGGAAGTGCTGTCGGTCCTGTGCTGGGAGGCGTCTTTGCGACCAA
GCTCAGTTGGCGATGTACCTATCGGCGCCATCTCCTTCACCGTCCTCCTT
CTCTACCTCCACGTCCCCAACCCCCGAACCCCCTAACAACAGGCCTAAAA
GCCATCGACTGGACCGGTATCCTCCTAATCGTCGGCTCCGCACTCATGAT
CCTCCTCGCCCTCGACCTAGGCGATGTAGTCTATCCCTGGTCCTCAGCGA
CCATAATCTGCCTGATAATATTCGGCATCCTATGCATGGGTCTCTTCGGA
GTAAACGAATACAAACTTGCCCGCAACCCCGTCATCCCATTCTGGCTCTT
CTCTTCACCTACAAAAGCAGCCCCTTATATCGTCTTCGCGTGTAACAACT
ACGTCTTTATTGGGCTGGCATATTACTTACCATTATATGCACAGTCCGTG
CTAGGCGCAAGCGCACTAGCCTCAGGCCTCTACCTCCTCCCACTGATAGT
CTCCTGCGCACTAGCTGCAGCTGCCGCAGGGGTATACATGCAACAGACAG
GACGGTACATACCGGTCATGTACATCGCGCAGATACTCCTCATGATAGGC
ACTGGTCTCCTAATCGACCTCCGCTTCGAGACCTCACTTACCCGTCTTAT
CATCTTTCAAACACTCGCTGGAATCGGAGTAGGCATGAACATCGAAGCAC
CAATCCTCGCCGCCCAGGCAGCTACCACCGTCCGGGACACCGCCGCAGTC
ACAGCGACAATGGGATTCGTCCGCTCGCTTGCAACAGCTATAGCAGTAGT
AGTTGGGGGCGTGGTATTTCAGAATGAGATGACATCTGCTAATGGTGCAC
TGACTGATAGACTTGATGGTGATGGTGCATTAGCGAAGGAGTTTAATGGG
GACCTTGCGGCGTCAAATGTGGAGCGAATTGGTGCGCTCGAGGAGAGTGA
ACAGATCATTGTGAGGGAGACGTACTTTCAGGCTCTGCGAATGGTCTGGG
TTATGTATGTTGCGTTTGCGGGGTTGGCGTCGGTGATTACGCTGTTTGTG
AGGGCTCATGACTTGAGGAGGGAGAATGAGGGTGCCGTGTTGGGGGTGGA
GAGGGGCGGGGGGATAGTCGGTTAGATGGCATCCGCAACACAGACTCAAG
AGATCGAAATCGCGCCTGTATCCACCACCCAGAACAACACCATTGGCCCC
GATATCTCAACCAACTCCAGCACCCGCAAGCCACCACCGTCCACAGTTAA
CAATGAACAATGTAATAATTCTGTCCCCAACCCCAATCAAACAGCCAACA
CCATTAACAACAAAACAACCATAACATGCACAATGCTCTCCCTGTGCCTC
TCCGTGCTTCTCTCCGCCCTCGACCTTACAATCATCACCACCGCCATCCC
TTCCATAGTAGGTACCTTAAACTCCGCCACCGGCTACACCTGGATAGGCG
GCGCCTACACCCTCGCCTACGCCGCTGTAACACCCATCTGGGGAACCGTC
GCCGACATATGGGGCCGGAAGCCCGTCATTTTGATTGCCATGGCTGTCTT
CCTTGGGGGTAGTCTGCTATGCGCGCTAGCACCGTCTATGGACATCTTGC
TCGCTGGTCGGGTGTTTCAGGGTCTAGGTGGCTCCGGCATGGGGATTATG
GTTAATATCATCATAAGTGATTTGTTTTCACTACGAGACAGGGGGCTCTA
CCTTGCCATCACTTCGTTAGTATGGGCTGTCGGAAGTGCTGTCGGTCCTG
TGCTGGGAGGCGTCTTTGCGACCAAGCTCAGTTGGCGATGTACCTATCGG
CGCCATCTCCTTCACCGTCCTCCTTCTCTACCTCCACGTCCCCAACCCCC
GAACCCCCTAACAACAGGCCTAAAAGCCATCGACTGGACCGGTATCCTCC
TAATCGTCGGCTCCGCACTCATGATCCTCCTCGCCCTCGACCTAGGCGAT
GTAGTCTATCCCTGGTCCTCAGCGACCATAATCTGCCTGATAATATTCGG
CATCCTATGCATGGGTCTCTTCGGAGTAAACGAATACAAACTTGCCCGCA
ACCCCGTCATCCCATTCTGGCTCTTCTCTTCACCTACAAAAGCAGCCCCT
TATATCGTCTTCGCGTGTAACAACTACGTCTTTATTGGGCTGGCATATTA
CTTACCATTATATGCACAGTCCGTGCTAGGCGCAAGCGCACTAGCCTCAG
GCCTCTACCTCCTCCCACTGATAGTCTCCTGCGCACTAGCTGCAGCTGCC
GCAGGGGTATACATGCAACAGACAGGACGGTACATACCGGTCATGTACAT
CGCGCAGATACTCCTCATGATAGGCACTGGTCTCCTAATCGACCTCCGCT
TCGAGACCTCACTTACCCGTCTTATCATCTTTCAAACACTCGCTGGAATC
GGAGTAGGCATGAACATCGAAGCACCAATCCTCGCCGCCCAGGCAGCTAC
CACCGTCCGGGACACCGCCGCAGTCACAGCGACAATGGGATTCGTCCGCT
CGCTTGCAACAGCTATAGCAGTAGTAGTTGGGGGCGTGGTATTTCAGAAT
GAGATGACATCTGCTAATGGTGCACTGACTGATAGACTTGATGGTGATGG
TGCATTAGCGAAGGAGTTTAATGGGGACCTTGCGGCGTCAAATGTGGAGC
GAATTGGTGCGCTCGAGGAGAGTGAACAGATCATTGTGAGGGAGACGTAC
TTTCAGGCTCTGCGAATGGTCTGGGTTATGTATGTTGCGTTTGCGGGGTT
GGCGTCGGTGATTACGCTGTTTGTGAGGGCTCATGACTTGAGGAGGGAGA
ATGAGGGTGCCGTGTTGGGGGTGGAGAGGGGCGGGGGGATAGTCGGTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_41265CAN33_41265Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41265-T1.exon1CAN33_41265-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_41265-T1.exon2CAN33_41265-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41265-T1.cdsCAN33_41265-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41265-T1CAN33_41265-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF06609
Productmajor facilitator superfamily protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3214299..3216092 +
Powered by Drupal