You are here

CAN33_41425-T1, CAN33_41425-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41425-T1
Unique NameCAN33_41425-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3307157..3308326+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41425-T1 ID=CAN33_41425-T1|Name=CAN33_41425-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1170bp|location=Sequence derived from alignment at NKJJ01000017.1:3307157..3308326+ (Aspergillus niger FDAARGOS_311)
ATGATCGCCTTGTCGTCGGCGGTGGTCATTGCTCGGTTTAGTTTGATTTT CTGGAAATTACGGTCGCTGCAGGTCGAAGATGGTTGTATTCTGCTGTCGT GGGCCTGCTTCCTGGCCATGAGCATTGCGTACATTATCGTCACCCCGGTT GTGTACAAAATCGATGCGTATACCGATGGCAAGATCGGTCCTTGGGCGAC CATGCTGTCCGATGCTCTTTTCATGATTAAGGTTTTCTTTGCGAACACAA TGCTATTATGGGCGTCGCTGTGGTCCGTCAAGCTATCCTTTCTGTTCCTC TATCGCCGACTCCTCCAGGACTTGCCGGGTGAGATGAAGTGGTGGTATGC GGTACTGTTTTTCTGCATCGTGGTGCGCCCATAGATCGAGCTATCGTGTG TGAGAACGTTAGCTGATAGCTGTTTGGACCTTTATTGGGGCAGTTATCTC CAACTTTACCTCATGCCAAAGTATGCATGCATGGTTCACCGTTGGTCAGT GCTCCTTCTCCCCTGCATGTGTGGGTACTGACCAGCTGCGAAGGGGAGTG CAGTACACACCGAGATGCTGTGGCAGAGATTGCCAGCTTATATTATAGCT TTGCGGTCGATGCAATTAGCGACATTATGAGTGAGTCGCTCTTCCAGGGT TTCATCAAAATACAATGCTGAGTGAGCAAGTCATGGTGCTGCCGTTGCGG CTGGTGGTGTCGCTGCGTCTTCCGCTGGGCCAGAAGATTAGTGTCGCCGC CGTGTTTGCCTTGGGCACCATCTGCGTGATCATGGCCGTCGTGCGAGTCA TCCAGATTGGCACTCGCGCCAACAACGACAGCACCCCGAGCAGTTCCTGG CTGGCATTCTGGGGTATGATTGAGGCGGGGATAGGTGTGGATTAGGACCC TTGATTTGCTCTCTGGTATGCTAATTCTTCTTGCTAGCTGTCATTGTCGG CTGCCTTCCAGCTTTCGCGATCATCTACCGCCGCACCAAGAACACCCATC GCTACCGAAGCAGCTATGTCGGCATGTCTTCGTCAGTTTACGTCCCACAG GACGATGTCGCTTTGTCGGAACTTGCTACACGCGGGGAGAATACTGGCAC AGGAGACGCAGGTCTAAAAGCATTCAACACTACGCCGGAACTACCGATGG AATTGTCTGGTGAGGAGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:3307157..3308326+

>CAN33_41425-T1 ID=CAN33_41425-T1|Name=CAN33_41425-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3408bp|location=Sequence derived from alignment at NKJJ01000017.1:3307157..3308326+ (Aspergillus niger FDAARGOS_311)
ATGATCGCCTTGTCGTCGGCGGTGGTCATTGCTCGGTTTAGTTTGATTTT
CTGGAAATTACGGTCGCTGCAGGTCGAAGATGGTTGTATTCTGCTGTCGT
GGGCCTGCTTCCTGGCCATGAGCATTGCGTACATTATCGTCACCCCGGTT
GTGTACAAAATCGATGCGTATACCGATGGCAAGATCGGTCCTTGGGCGAC
CATGCTGTCCGATGCTCTTTTCATGATTAAGGTTTTCTTTGCGAACACAA
TGCTATTATGGGCGTCGCTGTGGTCCGTCAAGCTATCCTTTCTGTTCCTC
TATCGCCGACTCCTCCAGGACTTGCCGGGGGAGTGCAGTACACACCGAGA
TGCTGTGGCAGAGATTGCCAGCTTATATTATAGCTTTGCGGTCGATGCAA
TTAGCGACATTATGATCATGGTGCTGCCGTTGCGGCTGGTGGTGTCGCTG
CGTCTTCCGCTGGGCCAGAAGATTAGTGTCGCCGCCGTGTTTGCCTTGGG
CACCATCTGCGTGATCATGGCCGTCGTGCGAGTCATCCAGATTGGCACTC
GCGCCAACAACGACAGCACCCCGAGCAGTTCCTGGCTGGCATTCTGGGGT
ATGATTGAGGCGGGGATAGCTGTCATTGTCGGCTGCCTTCCAGCTTTCGC
GATCATCTACCGCCGCACCAAGAACACCCATCGCTACCGAAGCAGCTATG
TCGGCATGTCTTCGTCAGTTTACGTCCCACAGGACGATGTCGCTTTGTCG
GAACTTGCTACACGCGGGGAGAATACTGGCACAGGAGACGCAGGTCTAAA
AGCATTCAACACTACGCCGGAACTACCGATGGAATTGTCTGGTGAGGAGT
GAATGATCGCCTTGTCGTCGGCGGTGGTCATTGCTCGGTTTAGTTTGATT
TTCTGGAAATTACGGTCGCTGCAGGTCGAAGATGGTTGTATTCTGCTGTC
GTGGGCCTGCTTCCTGGCCATGAGCATTGCGTACATTATCGTCACCCCGG
TTGTGTACAAAATCGATGCGTATACCGATGGCAAGATCGGTCCTTGGGCG
ACCATGCTGTCCGATGCTCTTTTCATGATTAAGGTTTTCTTTGCGAACAC
AATGCTATTATGGGCGTCGCTGTGGTCCGTCAAGCTATCCTTTCTGTTCC
TCTATCGCCGACTCCTCCAGGACTTGCCGGGGGAGTGCAGTACACACCGA
GATGCTGTGGCAGAGATTGCCAGCTTATATTATAGCTTTGCGGTCGATGC
AATTAGCGACATTATGATCATGGTGCTGCCGTTGCGGCTGGTGGTGTCGC
TGCGTCTTCCGCTGGGCCAGAAGATTAGTGTCGCCGCCGTGTTTGCCTTG
GGCACCATCTGCGTGATCATGGCCGTCGTGCGAGTCATCCAGATTGGCAC
TCGCGCCAACAACGACAGCACCCCGAGCAGTTCCTGGCTGGCATTCTGGG
GTATGATTGAGGCGGGGATAGCTGTCATTGTCGGCTGCCTTCCAGCTTTC
GCGATCATCTACCGCCGCACCAAGAACACCCATCGCTACCGAAGCAGCTA
TGTCGGCATGTCTTCGTCAGTTTACGTCCCACAGGACGATGTCGCTTTGT
CGGAACTTGCTACACGCGGGGAGAATACTGGCACAGGAGACGCAGGTCTA
AAAGCATTCAACACTACGCCGGAACTACCGATGGAATTGTCTGGTGAGGA
GTGAATGATCGCCTTGTCGTCGGCGGTGGTCATTGCTCGGTTTAGTTTGA
TTTTCTGGAAATTACGGTCGCTGCAGGTCGAAGATGGTTGTATTCTGCTG
TCGTGGGCCTGCTTCCTGGCCATGAGCATTGCGTACATTATCGTCACCCC
GGTTGTGTACAAAATCGATGCGTATACCGATGGCAAGATCGGTCCTTGGG
CGACCATGCTGTCCGATGCTCTTTTCATGATTAAGGTTTTCTTTGCGAAC
ACAATGCTATTATGGGCGTCGCTGTGGTCCGTCAAGCTATCCTTTCTGTT
CCTCTATCGCCGACTCCTCCAGGACTTGCCGGGGGAGTGCAGTACACACC
GAGATGCTGTGGCAGAGATTGCCAGCTTATATTATAGCTTTGCGGTCGAT
GCAATTAGCGACATTATGATCATGGTGCTGCCGTTGCGGCTGGTGGTGTC
GCTGCGTCTTCCGCTGGGCCAGAAGATTAGTGTCGCCGCCGTGTTTGCCT
TGGGCACCATCTGCGTGATCATGGCCGTCGTGCGAGTCATCCAGATTGGC
ACTCGCGCCAACAACGACAGCACCCCGAGCAGTTCCTGGCTGGCATTCTG
GGGTATGATTGAGGCGGGGATAGCTGTCATTGTCGGCTGCCTTCCAGCTT
TCGCGATCATCTACCGCCGCACCAAGAACACCCATCGCTACCGAAGCAGC
TATGTCGGCATGTCTTCGTCAGTTTACGTCCCACAGGACGATGTCGCTTT
GTCGGAACTTGCTACACGCGGGGAGAATACTGGCACAGGAGACGCAGGTC
TAAAAGCATTCAACACTACGCCGGAACTACCGATGGAATTGTCTGGTGAG
GAGTGAATGATCGCCTTGTCGTCGGCGGTGGTCATTGCTCGGTTTAGTTT
GATTTTCTGGAAATTACGGTCGCTGCAGGTCGAAGATGGTTGTATTCTGC
TGTCGTGGGCCTGCTTCCTGGCCATGAGCATTGCGTACATTATCGTCACC
CCGGTTGTGTACAAAATCGATGCGTATACCGATGGCAAGATCGGTCCTTG
GGCGACCATGCTGTCCGATGCTCTTTTCATGATTAAGGTTTTCTTTGCGA
ACACAATGCTATTATGGGCGTCGCTGTGGTCCGTCAAGCTATCCTTTCTG
TTCCTCTATCGCCGACTCCTCCAGGACTTGCCGGGGGAGTGCAGTACACA
CCGAGATGCTGTGGCAGAGATTGCCAGCTTATATTATAGCTTTGCGGTCG
ATGCAATTAGCGACATTATGATCATGGTGCTGCCGTTGCGGCTGGTGGTG
TCGCTGCGTCTTCCGCTGGGCCAGAAGATTAGTGTCGCCGCCGTGTTTGC
CTTGGGCACCATCTGCGTGATCATGGCCGTCGTGCGAGTCATCCAGATTG
GCACTCGCGCCAACAACGACAGCACCCCGAGCAGTTCCTGGCTGGCATTC
TGGGGTATGATTGAGGCGGGGATAGCTGTCATTGTCGGCTGCCTTCCAGC
TTTCGCGATCATCTACCGCCGCACCAAGAACACCCATCGCTACCGAAGCA
GCTATGTCGGCATGTCTTCGTCAGTTTACGTCCCACAGGACGATGTCGCT
TTGTCGGAACTTGCTACACGCGGGGAGAATACTGGCACAGGAGACGCAGG
TCTAAAAGCATTCAACACTACGCCGGAACTACCGATGGAATTGTCTGGTG
AGGAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_41425CAN33_41425Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41425-T1.exon1CAN33_41425-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_41425-T1.exon2CAN33_41425-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_41425-T1.exon3CAN33_41425-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_41425-T1.exon4CAN33_41425-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41425-T1.cdsCAN33_41425-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41425-T1CAN33_41425-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3307157..3308326 +