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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:3325616..3327095+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_41470-T1 ID=CAN33_41470-T1|Name=CAN33_41470-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1480bp|location=Sequence derived from alignment at NKJJ01000017.1:3325616..3327095+ (Aspergillus niger FDAARGOS_311)
ATGTCTATCGAAGCGGGACCCCCAACAACCATCAACGGCACCGAAGTACT
CCCTACCAAGCAATGGGCGCGAGTACTCGAAGCCCTCTTCTCAGAATCCC
TCCTAGCCAAGGTCTGGTTCGTCGCATCCAAGGCGATGGGTAGTGTGAGT
TATTTCGCCGAACCGCTAAATGTTTCACACTATCCTAAACAAAATACATT
CTACATAGACAACCCCTCCAACCTTCTACCCCGAATATACCGGCGAAGAC
AAGACCACATATATCTACCGAACCCTTGACTTCTGGACCTCCGGCTTCTT
CCCAGGCTCTTTATACCTCCTCTTAGAACGCAGCACTCTCTTCCGCGACC
GGCATCTTATTCTCCAACGACAAACCAGCGAATCCATCCTCCACCCCCAT
CCCCTCCAACACGAGCACCTCTGCCGCTGGTGGACAGCAAACCTTCACCA
AAACGCCCTTCGCAAGGATACTCACGACCTAGGGTTCATGATCACCCCTT
GGGCGATGAAAGCATGGACCCTGCATCGAGACCCAGCAGCCTACAACACT
CTCATACTAGCAGCCCACTCCCTCGCCAGTCGCTTTAATGAATCAACCCA
GTGTATTCGTAGCTGGGACCAGTGCATCACCAAGCGCTATGCATACAGAA
ATTCGTCGCAGGACTTCCTATTTATCATCGACAACATGCTGAACCTGGAT
TTGCTTTTCTGGGCAGCGAGAGAAACAGGCTGTCGGAGGCTTTATGATAT
AGCCAGGGCTCATGCGATCACTACACAGAAGCATCATATCCGAGATGACT
ATACGACATTTCACGTTGTTGATCTGGACCTGGAGACGGGGGAGGTGAAG
AAAAAATTCACAAATCAGGGATATAGTGATGATAGCTGCTGGGCACGAGG
CCAGGCGTGGGGAATCATGGGGTTCGCGCAGACATTCGAATGGACAAGAG
AGATGAGATTCCTTCGCACTGCTAGAGCACTGGCGGATGTATTTCTTGCG
AGATTGCCGGATGATGGCGTCCCATATTGGGATTTTGACGCGCCTGTTAC
TGACACCTCCCCACGCGATACCTCTGCTGCGATGATCGCTGCCTGTGGGA
TGTTGTTGCTCTATAAGGCTTACAAGAAGCTGCATGATGTTGAGGCGGCC
AACCACTACCTTCGGGCTGCTATGAAGCTGGTTGATTGTACGGTTGTGGG
GTATTTGAATCCCTTCATGCGGTTCGAGGCTGGTCCTGCGTCAGAAATCT
CCGTGTACGCAGGCCAGTGCTCGACGCATCACACTGAGACTCGGAACGGG
GCGGAAGTGCTAAAGGTGGTTGGGGATGTTGCTGAAACTATACTGACGGG
CGCAACAATCAATAACTATGAGTTTGCTCCGCGAAGGTGGTCGGACCATG
GTCTCGTCTATGCTGATTATTATTTCTTGCTGTTTGGAAATATGCTCCTT
GAGATGGACTTGGTCGATCCTCATATATAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:3325616..3327095+ >CAN33_41470-T1 ID=CAN33_41470-T1|Name=CAN33_41470-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2832bp|location=Sequence derived from alignment at NKJJ01000017.1:3325616..3327095+ (Aspergillus niger FDAARGOS_311)
ATGTCTATCGAAGCGGGACCCCCAACAACCATCAACGGCACCGAAGTACT
CCCTACCAAGCAATGGGCGCGAGTACTCGAAGCCCTCTTCTCAGAATCCC
TCCTAGCCAAGGTCTGGTTCGTCGCATCCAAGGCGATGGGTAGTACAACC
CCTCCAACCTTCTACCCCGAATATACCGGCGAAGACAAGACCACATATAT
CTACCGAACCCTTGACTTCTGGACCTCCGGCTTCTTCCCAGGCTCTTTAT
ACCTCCTCTTAGAACGCAGCACTCTCTTCCGCGACCGGCATCTTATTCTC
CAACGACAAACCAGCGAATCCATCCTCCACCCCCATCCCCTCCAACACGA
GCACCTCTGCCGCTGGTGGACAGCAAACCTTCACCAAAACGCCCTTCGCA
AGGATACTCACGACCTAGGGTTCATGATCACCCCTTGGGCGATGAAAGCA
TGGACCCTGCATCGAGACCCAGCAGCCTACAACACTCTCATACTAGCAGC
CCACTCCCTCGCCAGTCGCTTTAATGAATCAACCCAGTGTATTCGTAGCT
GGGACCAGTGCATCACCAAGCGCTATGCATACAGAAATTCGTCGCAGGAC
TTCCTATTTATCATCGACAACATGCTGAACCTGGATTTGCTTTTCTGGGC
AGCGAGAGAAACAGGCTGTCGGAGGCTTTATGATATAGCCAGGGCTCATG
CGATCACTACACAGAAGCATCATATCCGAGATGACTATACGACATTTCAC
GTTGTTGATCTGGACCTGGAGACGGGGGAGGTGAAGAAAAAATTCACAAA
TCAGGGATATAGTGATGATAGCTGCTGGGCACGAGGCCAGGCGTGGGGAA
TCATGGGGTTCGCGCAGACATTCGAATGGACAAGAGAGATGAGATTCCTT
CGCACTGCTAGAGCACTGGCGGATGTATTTCTTGCGAGATTGCCGGATGA
TGGCGTCCCATATTGGGATTTTGACGCGCCTGTTACTGACACCTCCCCAC
GCGATACCTCTGCTGCGATGATCGCTGCCTGTGGGATGTTGTTGCTCTAT
AAGGCTTACAAGAAGCTGCATGATGTTGAGGCGGCCAACCACTACCTTCG
GGCTGCTATGAAGCTGGTTGATTGTACGGTTGTGGGGTATTTGAATCCCT
TCATGCGGTTCGAGGCTGGTCCTGCGTCAGAAATCTCCGTGTACGCAGGC
CAGTGCTCGACGCATCACACTGAGACTCGGAACGGGGCGGAAGTGCTAAA
GGTGGTTGGGGATGTTGCTGAAACTATACTGACGGGCGCAACAATCAATA
ACTATGAGTTTGCTCCGCGAAGGTGGTCGGACCATGGTCTCGTCTATGCT
GATTATTATTTCTTGCTGTTTGGAAATATGCTCCTTGAGATGGACTTGGT
CGATCCTCATATATAAATGTCTATCGAAGCGGGACCCCCAACAACCATCA
ACGGCACCGAAGTACTCCCTACCAAGCAATGGGCGCGAGTACTCGAAGCC
CTCTTCTCAGAATCCCTCCTAGCCAAGGTCTGGTTCGTCGCATCCAAGGC
GATGGGTAGTACAACCCCTCCAACCTTCTACCCCGAATATACCGGCGAAG
ACAAGACCACATATATCTACCGAACCCTTGACTTCTGGACCTCCGGCTTC
TTCCCAGGCTCTTTATACCTCCTCTTAGAACGCAGCACTCTCTTCCGCGA
CCGGCATCTTATTCTCCAACGACAAACCAGCGAATCCATCCTCCACCCCC
ATCCCCTCCAACACGAGCACCTCTGCCGCTGGTGGACAGCAAACCTTCAC
CAAAACGCCCTTCGCAAGGATACTCACGACCTAGGGTTCATGATCACCCC
TTGGGCGATGAAAGCATGGACCCTGCATCGAGACCCAGCAGCCTACAACA
CTCTCATACTAGCAGCCCACTCCCTCGCCAGTCGCTTTAATGAATCAACC
CAGTGTATTCGTAGCTGGGACCAGTGCATCACCAAGCGCTATGCATACAG
AAATTCGTCGCAGGACTTCCTATTTATCATCGACAACATGCTGAACCTGG
ATTTGCTTTTCTGGGCAGCGAGAGAAACAGGCTGTCGGAGGCTTTATGAT
ATAGCCAGGGCTCATGCGATCACTACACAGAAGCATCATATCCGAGATGA
CTATACGACATTTCACGTTGTTGATCTGGACCTGGAGACGGGGGAGGTGA
AGAAAAAATTCACAAATCAGGGATATAGTGATGATAGCTGCTGGGCACGA
GGCCAGGCGTGGGGAATCATGGGGTTCGCGCAGACATTCGAATGGACAAG
AGAGATGAGATTCCTTCGCACTGCTAGAGCACTGGCGGATGTATTTCTTG
CGAGATTGCCGGATGATGGCGTCCCATATTGGGATTTTGACGCGCCTGTT
ACTGACACCTCCCCACGCGATACCTCTGCTGCGATGATCGCTGCCTGTGG
GATGTTGTTGCTCTATAAGGCTTACAAGAAGCTGCATGATGTTGAGGCGG
CCAACCACTACCTTCGGGCTGCTATGAAGCTGGTTGATTGTACGGTTGTG
GGGTATTTGAATCCCTTCATGCGGTTCGAGGCTGGTCCTGCGTCAGAAAT
CTCCGTGTACGCAGGCCAGTGCTCGACGCATCACACTGAGACTCGGAACG
GGGCGGAAGTGCTAAAGGTGGTTGGGGATGTTGCTGAAACTATACTGACG
GGCGCAACAATCAATAACTATGAGTTTGCTCCGCGAAGGTGGTCGGACCA
TGGTCTCGTCTATGCTGATTATTATTTCTTGCTGTTTGGAAATATGCTCC
TTGAGATGGACTTGGTCGATCCTCATATATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000171.8 |
| Note | EggNog:ENOG41 |
| Note | CAZy:GH88 |
| DBxref | InterPro:IPR008928 |
| DBxref | InterPro:IPR010905 |
| DBxref | PFAM:PF07470 |
| Product | Glycosyl Hydrolase Family 88 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:3325616..3327095 + |
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