|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:3327222..3329739- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_41475-T1 ID=CAN33_41475-T1|Name=CAN33_41475-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2518bp|location=Sequence derived from alignment at NKJJ01000017.1:3327222..3329739- (Aspergillus niger FDAARGOS_311)
ATGCCCCCCAAATCCCATCCCGCAACAGCCAACGCCAACGTAGGAGACTT
GCCAGAGACAACCACCAAAGGAGAGGAGGAGATTCCAGCCTGTCAGTTCT
GTCGCAAGAAAAAAGCCAAGTGCAATCGAGCGCAGCCGTGTTCGCAATGT
ATGCGATCGGATGTTCTTTGCGTCTACGATGATCGACGGACGAAGCCCGG
TCTCCGAGCTGGGGCGGTCGACCAGCTCTATCGGCGCGTCGAGACGCTGG
AGAATATGTTTTTGGGTCAGGAGATGCTCTGGCAGCAGATGTGGAAGGCT
TTATTCCCGAACACTGAGCCCCCGCGATCCCTGGACAAGGGAACCACGGC
AGCCACGACCCTGACGGAGCGTCGGGAGCAGTTGAAGGCTTCATTACAGG
AGCCTCCACCCTTAGCAGCGAAGAGGTCACTTACAGTGGCAGACGCCGAC
AATTCTGCACCACTGGACTGTGTTCCTCTCCCAGCCAAACGCGCCCGTGT
GGAGGACGAAGTGGCTCCCCATGCGGCTGTCCTAGAGCCCGAGCTCTTCT
TGGCCAACTCTTTACCTGACATCGTCTTGAACGAACTGGTGGATTTCTAC
TTTGTCAACATCCATCCGTGGATACCGATACTACACGTTAAGAGATTCCG
TGAGCGCATGCGATCGCCGGAGGAACGAGGGCATATCAATTGCATCTTAC
ATGCCATCATTTCTGTCTGTGCCCGCTTTTCACAAAATGGCCCAAATGGC
GATACGTTGAACTTAAAAGAGATCGCCAAGAAAAGTCGGCAAGAGGTAAT
ATTGCAAAGCACTGAAACCTTCTCCGTTGAGAATCTCCAAGCGCTAGTGA
TCGTCGCATTTGAGACAGTGAGCAAGAGGCCCACGCCATGGATATCCGGG
AACAAGTAGACTGATTTCATTCGAACAGATTAATCGCGGCCGTGGGCCCT
CCTCATGGTCTATCATTGGCAGCATGGCGGGAACCGTGGAGCAGCTTCAG
CTTGGCGTGGAAGAAGATGACCTGTATCGTGTCAAGCGCATGGGAGAAAG
ACTGATCAGGCGCATGGTCTTTCTCACACCATCTCGGTCATGGAGTGAAG
CAGAAGAGCGTCGCCGTGTATTCTGGGCAGTCTTTCTCATGGACCGCTTC
TGCAGTGTCTCGACAGGCTGGAAGATCAGTCTGAGGAATGCTGATGTGAA
GCGCCGTCTCCCGTGTGAAGGTGCTCTGTGGGAAAAGGAACAGGAGGTCT
GCACCCCGTATTTCGGCATCTCTGATTTCAAGAACACTTCCATGCCTAAT
AGTCACTCAACTTCGATGGATGGCTGTGAAGAACAGGCCATCGGCGCATT
TGCCTACATCATCGAGGCTACTGAGTCACTGGCCTTAGTGACCAACTTCT
ATCTCCACCACGTCTTTCTGATTAACGATGCCAGCAAGGCACGATTATGG
CTCGTCAAATTCAAGGAACTAGATCTGCGACTGATTCAGTACGTATCATC
TCTTCCCAAGGAATGTCTAAACACCAGTGATGCTGACGCGCGCAGATGGA
AAATCCACTTGCCTCCCAAATGGCGCGAAGCCTGCGTCCTAAATGAACAC
AGAGTCATGGACCCCAATCTGACTCTGGCACACATCACCCACAATACGGC
GGTAATTCTGCTGCATCAGGGCATCGCCTATCCACCATCGCATTGGCAGA
ACTGTCCCATTAAGCTCCCATCAGCATCCTCTGCTGATACGTGCCTTGAA
GCGGCTTCAGAGATAGCAACTATTGCTAATCAATTCCTGTCCTTTTCTCC
CATCTTCACGAATCCCCAATTTTCTTTTTGTCTATTCATCGCCGGCCGCA
CACTCCTCGCACACGCTAGGTACAATAGGGTACCGCCTTCACCCGCACTC
AACACCCTAATTGCAAACCTGATGGAGATCTCGCAGCGGTGGACAAGACA
CCATGACGCCAGCGAATCCCAGCAAGAGGAGAGCCTGGCATTCAAGTTTG
CCACCCGACTCATCGAAGCCCAGCAGAATCGAACCAGTGCATCTCGTCCG
AGTCTGGATATTCGCACGACTGCGTATTCAGATGAATCAAAGGAGGAGAT
GTACAAAGATCCCATGGGAACAAACCAGGATGATCTCCCAGACTATGAAT
CGCTTAGCCGACCACTGCAGCTGGCTTCATTCCCTTCGCAGGAGTCCACT
TCCTGCACGTTCGACCCATTCAGTCTGGCCTTCCCACCGCTGCCACCAGC
CTTTCAGCAGGACTTTTCGCCCACTGGTCTCGACCCGCTCTCTTTCTATA
ATATGCAATTGCCGTCGGAGTCTATGTCTTCGCCTCTTGGTACGAGAAGC
CACGGATCGGGTTCTCAGCACGATTCGGAGAGTTCCATGACCAGTCTCTT
GCCGACGGATATTTCTCATCTCTTCGATATGACGTCTAGTCCGGGGCAGA
GAATCAGTTATTACGGCAATACACGGGGAGTGACCAACAATTCGATAGTC
GAGGGAGCCGACAATTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:3327222..3329739- >CAN33_41475-T1 ID=CAN33_41475-T1|Name=CAN33_41475-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7200bp|location=Sequence derived from alignment at NKJJ01000017.1:3327222..3329739- (Aspergillus niger FDAARGOS_311)
ATGGAAAATCCACTTGCCTCCCAAATGGCGCGAAGCCTGCGTCCTAAATG
AACACAGAGTCATGGACCCCAATCTGACTCTGGCACACATCACCCACAAT
ACGGCGGTAATTCTGCTGCATCAGGGCATCGCCTATCCACCATCGCATTG
GCAGAACTGTCCCATTAAGCTCCCATCAGCATCCTCTGCTGATACGTGCC
TTGAAGCGGCTTCAGAGATAGCAACTATTGCTAATCAATTCCTGTCCTTT
TCTCCCATCTTCACGAATCCCCAATTTTCTTTTTGTCTATTCATCGCCGG
CCGCACACTCCTCGCACACGCTAGGTACAATAGGGTACCGCCTTCACCCG
CACTCAACACCCTAATTGCAAACCTGATGGAGATCTCGCAGCGGTGGACA
AGACACCATGACGCCAGCGAATCCCAGCAAGAGGAGAGCCTGGCATTCAA
GTTTGCCACCCGACTCATCGAAGCCCAGCAGAATCGAACCAGTGCATCTC
GTCCGAGTCTGGATATTCGCACGACTGCGTATTCAGATGAATCAAAGGAG
GAGATGTACAAAGATCCCATGGGAACAAACCAGGATGATCTCCCAGACTA
TGAATCGCTTAGCCGACCACTGCAGCTGGCTTCATTCCCTTCGCAGGAGT
CCACTTCCTGCACGTTCGACCCATTCAGTCTGGCCTTCCCACCGCTGCCA
CCAGCCTTTCAGCAGGACTTTTCGCCCACTGGTCTCGACCCGCTCTCTTT
CTATAATATGCAATTGCCGTCGGAGTCTATGTCTTCGCCTCTTGGTACGA
GAAGCCACGGATCGGGTTCTCAGCACGATTCGGAGAGTTCCATGACCAGT
CTCTTGCCGACGGATATTTCTCATCTCTTCGATATGACGTCTAGTCCGGG
GCAGAGAATCAGTTATTACGGCAATACACGGGGAGTGACCAACAATTCGA
TAGTCGAGGGAGCCGACAATTAGATTAATCGCGGCCGTGGGCCCTCCTCA
TGGTCTATCATTGGCAGCATGGCGGGAACCGTGGAGCAGCTTCAGCTTGG
CGTGGAAGAAGATGACCTGTATCGTGTCAAGCGCATGGGAGAAAGACTGA
TCAGGCGCATGGTCTTTCTCACACCATCTCGGTCATGGAGTGAAGCAGAA
GAGCGTCGCCGTGTATTCTGGGCAGTCTTTCTCATGGACCGCTTCTGCAG
TGTCTCGACAGGCTGGAAGATCAGTCTGAGGAATGCTGATGTGAAGCGCC
GTCTCCCGTGTGAAGGTGCTCTGTGGGAAAAGGAACAGGAGGTCTGCACC
CCGTATTTCGGCATCTCTGATTTCAAGAACACTTCCATGCCTAATAGTCA
CTCAACTTCGATGGATGGCTGTGAAGAACAGGCCATCGGCGCATTTGCCT
ACATCATCGAGGCTACTGAGTCACTGGCCTTAGTGACCAACTTCTATCTC
CACCACGTCTTTCTGATTAACGATGCCAGCAAGGCACGATTATGGCTCGT
CAAATTCAAGGAACTAGATCTGCGACTGATTCAATGCCCCCCAAATCCCA
TCCCGCAACAGCCAACGCCAACGTAGGAGACTTGCCAGAGACAACCACCA
AAGGAGAGGAGGAGATTCCAGCCTGTCAGTTCTGTCGCAAGAAAAAAGCC
AAGTGCAATCGAGCGCAGCCGTGTTCGCAATGTATGCGATCGGATGTTCT
TTGCGTCTACGATGATCGACGGACGAAGCCCGGTCTCCGAGCTGGGGCGG
TCGACCAGCTCTATCGGCGCGTCGAGACGCTGGAGAATATGTTTTTGGGT
CAGGAGATGCTCTGGCAGCAGATGTGGAAGGCTTTATTCCCGAACACTGA
GCCCCCGCGATCCCTGGACAAGGGAACCACGGCAGCCACGACCCTGACGG
AGCGTCGGGAGCAGTTGAAGGCTTCATTACAGGAGCCTCCACCCTTAGCA
GCGAAGAGGTCACTTACAGTGGCAGACGCCGACAATTCTGCACCACTGGA
CTGTGTTCCTCTCCCAGCCAAACGCGCCCGTGTGGAGGACGAAGTGGCTC
CCCATGCGGCTGTCCTAGAGCCCGAGCTCTTCTTGGCCAACTCTTTACCT
GACATCGTCTTGAACGAACTGGTGGATTTCTACTTTGTCAACATCCATCC
GTGGATACCGATACTACACGTTAAGAGATTCCGTGAGCGCATGCGATCGC
CGGAGGAACGAGGGCATATCAATTGCATCTTACATGCCATCATTTCTGTC
TGTGCCCGCTTTTCACAAAATGGCCCAAATGGCGATACGTTGAACTTAAA
AGAGATCGCCAAGAAAAGTCGGCAAGAGGTAATATTGCAAAGCACTGAAA
CCTTCTCCGTTGAGAATCTCCAAGCGCTAGTGATCGTCGCATTTGAGACA
ATGGAAAATCCACTTGCCTCCCAAATGGCGCGAAGCCTGCGTCCTAAATG
AACACAGAGTCATGGACCCCAATCTGACTCTGGCACACATCACCCACAAT
ACGGCGGTAATTCTGCTGCATCAGGGCATCGCCTATCCACCATCGCATTG
GCAGAACTGTCCCATTAAGCTCCCATCAGCATCCTCTGCTGATACGTGCC
TTGAAGCGGCTTCAGAGATAGCAACTATTGCTAATCAATTCCTGTCCTTT
TCTCCCATCTTCACGAATCCCCAATTTTCTTTTTGTCTATTCATCGCCGG
CCGCACACTCCTCGCACACGCTAGGTACAATAGGGTACCGCCTTCACCCG
CACTCAACACCCTAATTGCAAACCTGATGGAGATCTCGCAGCGGTGGACA
AGACACCATGACGCCAGCGAATCCCAGCAAGAGGAGAGCCTGGCATTCAA
GTTTGCCACCCGACTCATCGAAGCCCAGCAGAATCGAACCAGTGCATCTC
GTCCGAGTCTGGATATTCGCACGACTGCGTATTCAGATGAATCAAAGGAG
GAGATGTACAAAGATCCCATGGGAACAAACCAGGATGATCTCCCAGACTA
TGAATCGCTTAGCCGACCACTGCAGCTGGCTTCATTCCCTTCGCAGGAGT
CCACTTCCTGCACGTTCGACCCATTCAGTCTGGCCTTCCCACCGCTGCCA
CCAGCCTTTCAGCAGGACTTTTCGCCCACTGGTCTCGACCCGCTCTCTTT
CTATAATATGCAATTGCCGTCGGAGTCTATGTCTTCGCCTCTTGGTACGA
GAAGCCACGGATCGGGTTCTCAGCACGATTCGGAGAGTTCCATGACCAGT
CTCTTGCCGACGGATATTTCTCATCTCTTCGATATGACGTCTAGTCCGGG
GCAGAGAATCAGTTATTACGGCAATACACGGGGAGTGACCAACAATTCGA
TAGTCGAGGGAGCCGACAATTAGATTAATCGCGGCCGTGGGCCCTCCTCA
TGGTCTATCATTGGCAGCATGGCGGGAACCGTGGAGCAGCTTCAGCTTGG
CGTGGAAGAAGATGACCTGTATCGTGTCAAGCGCATGGGAGAAAGACTGA
TCAGGCGCATGGTCTTTCTCACACCATCTCGGTCATGGAGTGAAGCAGAA
GAGCGTCGCCGTGTATTCTGGGCAGTCTTTCTCATGGACCGCTTCTGCAG
TGTCTCGACAGGCTGGAAGATCAGTCTGAGGAATGCTGATGTGAAGCGCC
GTCTCCCGTGTGAAGGTGCTCTGTGGGAAAAGGAACAGGAGGTCTGCACC
CCGTATTTCGGCATCTCTGATTTCAAGAACACTTCCATGCCTAATAGTCA
CTCAACTTCGATGGATGGCTGTGAAGAACAGGCCATCGGCGCATTTGCCT
ACATCATCGAGGCTACTGAGTCACTGGCCTTAGTGACCAACTTCTATCTC
CACCACGTCTTTCTGATTAACGATGCCAGCAAGGCACGATTATGGCTCGT
CAAATTCAAGGAACTAGATCTGCGACTGATTCAATGCCCCCCAAATCCCA
TCCCGCAACAGCCAACGCCAACGTAGGAGACTTGCCAGAGACAACCACCA
AAGGAGAGGAGGAGATTCCAGCCTGTCAGTTCTGTCGCAAGAAAAAAGCC
AAGTGCAATCGAGCGCAGCCGTGTTCGCAATGTATGCGATCGGATGTTCT
TTGCGTCTACGATGATCGACGGACGAAGCCCGGTCTCCGAGCTGGGGCGG
TCGACCAGCTCTATCGGCGCGTCGAGACGCTGGAGAATATGTTTTTGGGT
CAGGAGATGCTCTGGCAGCAGATGTGGAAGGCTTTATTCCCGAACACTGA
GCCCCCGCGATCCCTGGACAAGGGAACCACGGCAGCCACGACCCTGACGG
AGCGTCGGGAGCAGTTGAAGGCTTCATTACAGGAGCCTCCACCCTTAGCA
GCGAAGAGGTCACTTACAGTGGCAGACGCCGACAATTCTGCACCACTGGA
CTGTGTTCCTCTCCCAGCCAAACGCGCCCGTGTGGAGGACGAAGTGGCTC
CCCATGCGGCTGTCCTAGAGCCCGAGCTCTTCTTGGCCAACTCTTTACCT
GACATCGTCTTGAACGAACTGGTGGATTTCTACTTTGTCAACATCCATCC
GTGGATACCGATACTACACGTTAAGAGATTCCGTGAGCGCATGCGATCGC
CGGAGGAACGAGGGCATATCAATTGCATCTTACATGCCATCATTTCTGTC
TGTGCCCGCTTTTCACAAAATGGCCCAAATGGCGATACGTTGAACTTAAA
AGAGATCGCCAAGAAAAGTCGGCAAGAGGTAATATTGCAAAGCACTGAAA
CCTTCTCCGTTGAGAATCTCCAAGCGCTAGTGATCGTCGCATTTGAGACA
ATGGAAAATCCACTTGCCTCCCAAATGGCGCGAAGCCTGCGTCCTAAATG
AACACAGAGTCATGGACCCCAATCTGACTCTGGCACACATCACCCACAAT
ACGGCGGTAATTCTGCTGCATCAGGGCATCGCCTATCCACCATCGCATTG
GCAGAACTGTCCCATTAAGCTCCCATCAGCATCCTCTGCTGATACGTGCC
TTGAAGCGGCTTCAGAGATAGCAACTATTGCTAATCAATTCCTGTCCTTT
TCTCCCATCTTCACGAATCCCCAATTTTCTTTTTGTCTATTCATCGCCGG
CCGCACACTCCTCGCACACGCTAGGTACAATAGGGTACCGCCTTCACCCG
CACTCAACACCCTAATTGCAAACCTGATGGAGATCTCGCAGCGGTGGACA
AGACACCATGACGCCAGCGAATCCCAGCAAGAGGAGAGCCTGGCATTCAA
GTTTGCCACCCGACTCATCGAAGCCCAGCAGAATCGAACCAGTGCATCTC
GTCCGAGTCTGGATATTCGCACGACTGCGTATTCAGATGAATCAAAGGAG
GAGATGTACAAAGATCCCATGGGAACAAACCAGGATGATCTCCCAGACTA
TGAATCGCTTAGCCGACCACTGCAGCTGGCTTCATTCCCTTCGCAGGAGT
CCACTTCCTGCACGTTCGACCCATTCAGTCTGGCCTTCCCACCGCTGCCA
CCAGCCTTTCAGCAGGACTTTTCGCCCACTGGTCTCGACCCGCTCTCTTT
CTATAATATGCAATTGCCGTCGGAGTCTATGTCTTCGCCTCTTGGTACGA
GAAGCCACGGATCGGGTTCTCAGCACGATTCGGAGAGTTCCATGACCAGT
CTCTTGCCGACGGATATTTCTCATCTCTTCGATATGACGTCTAGTCCGGG
GCAGAGAATCAGTTATTACGGCAATACACGGGGAGTGACCAACAATTCGA
TAGTCGAGGGAGCCGACAATTAGATTAATCGCGGCCGTGGGCCCTCCTCA
TGGTCTATCATTGGCAGCATGGCGGGAACCGTGGAGCAGCTTCAGCTTGG
CGTGGAAGAAGATGACCTGTATCGTGTCAAGCGCATGGGAGAAAGACTGA
TCAGGCGCATGGTCTTTCTCACACCATCTCGGTCATGGAGTGAAGCAGAA
GAGCGTCGCCGTGTATTCTGGGCAGTCTTTCTCATGGACCGCTTCTGCAG
TGTCTCGACAGGCTGGAAGATCAGTCTGAGGAATGCTGATGTGAAGCGCC
GTCTCCCGTGTGAAGGTGCTCTGTGGGAAAAGGAACAGGAGGTCTGCACC
CCGTATTTCGGCATCTCTGATTTCAAGAACACTTCCATGCCTAATAGTCA
CTCAACTTCGATGGATGGCTGTGAAGAACAGGCCATCGGCGCATTTGCCT
ACATCATCGAGGCTACTGAGTCACTGGCCTTAGTGACCAACTTCTATCTC
CACCACGTCTTTCTGATTAACGATGCCAGCAAGGCACGATTATGGCTCGT
CAAATTCAAGGAACTAGATCTGCGACTGATTCAATGCCCCCCAAATCCCA
TCCCGCAACAGCCAACGCCAACGTAGGAGACTTGCCAGAGACAACCACCA
AAGGAGAGGAGGAGATTCCAGCCTGTCAGTTCTGTCGCAAGAAAAAAGCC
AAGTGCAATCGAGCGCAGCCGTGTTCGCAATGTATGCGATCGGATGTTCT
TTGCGTCTACGATGATCGACGGACGAAGCCCGGTCTCCGAGCTGGGGCGG
TCGACCAGCTCTATCGGCGCGTCGAGACGCTGGAGAATATGTTTTTGGGT
CAGGAGATGCTCTGGCAGCAGATGTGGAAGGCTTTATTCCCGAACACTGA
GCCCCCGCGATCCCTGGACAAGGGAACCACGGCAGCCACGACCCTGACGG
AGCGTCGGGAGCAGTTGAAGGCTTCATTACAGGAGCCTCCACCCTTAGCA
GCGAAGAGGTCACTTACAGTGGCAGACGCCGACAATTCTGCACCACTGGA
CTGTGTTCCTCTCCCAGCCAAACGCGCCCGTGTGGAGGACGAAGTGGCTC
CCCATGCGGCTGTCCTAGAGCCCGAGCTCTTCTTGGCCAACTCTTTACCT
GACATCGTCTTGAACGAACTGGTGGATTTCTACTTTGTCAACATCCATCC
GTGGATACCGATACTACACGTTAAGAGATTCCGTGAGCGCATGCGATCGC
CGGAGGAACGAGGGCATATCAATTGCATCTTACATGCCATCATTTCTGTC
TGTGCCCGCTTTTCACAAAATGGCCCAAATGGCGATACGTTGAACTTAAA
AGAGATCGCCAAGAAAAGTCGGCAAGAGGTAATATTGCAAAGCACTGAAA
CCTTCTCCGTTGAGAATCTCCAAGCGCTAGTGATCGTCGCATTTGAGACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000171.8 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | Fungal specific transcription factor domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:3327222..3329739 - |
|
