You are here

Home

CAN33_41700-T1, CAN33_41700-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41700-T1
Unique NameCAN33_41700-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3483189..3484029-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41700-T1 ID=CAN33_41700-T1|Name=CAN33_41700-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=841bp|location=Sequence derived from alignment at NKJJ01000017.1:3483189..3484029- (Aspergillus niger FDAARGOS_311)
ATGGGCGCTGTAACCTACCGTGATGGCATTGCTATCTTACAACTTGTTAT
CTTTCCCTTTATCTTCGCCGCGGTGATTTTCATATGGAACCGGGCTGGCT
GGAGGGTTGGGAGCAAGATCTGGTAGTACCCTGCTACGCTCTTTCTTATT
CGGATTGCCGGCAGTATCGCATCGCTATTGTCCATCGATCATGATTCCAA
GAACGTCGAGATCGCCATTGCTGTATACGAGTTGATTGGTCTTGCCCCTT
TTTTGTTGACCTACGTCGGAGTTCTAAGACAAATGTGAGTCCCCTCGAAT
AAGTAGCAGATATCCACATGACGCTAACTCCTCTACCAGTGATGTTAATC
AAGTAGTACCAGTCAGATGGCTTAATCTTGTGTCTCTAGTCGGTATCATC
GGTCTCATTATTGGTATTGCTGGAGTCAGCACCGCCGATGACAACGGAGG
CAGCTACCAGCCAACAACCACCGTCAAAGCTTCCATGGGAATCTTCATTG
TTCTTTTCGTGATCTATTATCTGATCGCCGCGTTCATGTTCCTCCAGCTG
TGTGATTTGAAGGCGTCCCAGAAGAAGTTGTTTCTTGCTATTATCCTCTC
CACGCCTTTCATCTTGGTCCGCGTGGTCTACGCAGCGATCGGCGATTTCA
CCACCATCGAGCGGTTCTCGATCATCAGCGTTAACGGAAGCCCCACTATC
TACTTGGTCATGGATGTGCTGGAAGAGATTGTTGCCATGGCTATCACGAT
GTTTCTTGGCATGTCGGCTGTGCTGGACCCTGACTTTGTGCGCCTTACCC
CGGATCAGATGAAGTCTGAGCCGAAGCCAGAGGTTGTTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:3483189..3484029-

>CAN33_41700-T1 ID=CAN33_41700-T1|Name=CAN33_41700-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2196bp|location=Sequence derived from alignment at NKJJ01000017.1:3483189..3484029- (Aspergillus niger FDAARGOS_311)
TGATGTTAATCAAGTAGTACCAGTCAGATGGCTTAATCTTGTGTCTCTAG
TCGGTATCATCGGTCTCATTATTGGTATTGCTGGAGTCAGCACCGCCGAT
GACAACGGAGGCAGCTACCAGCCAACAACCACCGTCAAAGCTTCCATGGG
AATCTTCATTGTTCTTTTCGTGATCTATTATCTGATCGCCGCGTTCATGT
TCCTCCAGCTGTGTGATTTGAAGGCGTCCCAGAAGAAGTTGTTTCTTGCT
ATTATCCTCTCCACGCCTTTCATCTTGGTCCGCGTGGTCTACGCAGCGAT
CGGCGATTTCACCACCATCGAGCGGTTCTCGATCATCAGCGTTAACGGAA
GCCCCACTATCTACTTGGTCATGGATGTGCTGGAAGAGATTGTTGCCATG
GCTATCACGATGTTTCTTGGCATGTCGGCTGTGCTGGACCCTGACTTTGT
GCGCCTTACCCCGGATCAGATGAAGTCTGAGCCGAAGCCAGAGGTTGTTT
GATACCCTGCTACGCTCTTTCTTATTCGGATTGCCGGCAGTATCGCATCG
CTATTGTCCATCGATCATGATTCCAAGAACGTCGAGATCGCCATTGCTGT
ATACGAGTTGATTGGTCTTGCCCCTTTTTTGTTGACCTACGTCGGAGTTC
TAAGACAAATATGGGCGCTGTAACCTACCGTGATGGCATTGCTATCTTAC
AACTTGTTATCTTTCCCTTTATCTTCGCCGCGTGATGTTAATCAAGTAGT
ACCAGTCAGATGGCTTAATCTTGTGTCTCTAGTCGGTATCATCGGTCTCA
TTATTGGTATTGCTGGAGTCAGCACCGCCGATGACAACGGAGGCAGCTAC
CAGCCAACAACCACCGTCAAAGCTTCCATGGGAATCTTCATTGTTCTTTT
CGTGATCTATTATCTGATCGCCGCGTTCATGTTCCTCCAGCTGTGTGATT
TGAAGGCGTCCCAGAAGAAGTTGTTTCTTGCTATTATCCTCTCCACGCCT
TTCATCTTGGTCCGCGTGGTCTACGCAGCGATCGGCGATTTCACCACCAT
CGAGCGGTTCTCGATCATCAGCGTTAACGGAAGCCCCACTATCTACTTGG
TCATGGATGTGCTGGAAGAGATTGTTGCCATGGCTATCACGATGTTTCTT
GGCATGTCGGCTGTGCTGGACCCTGACTTTGTGCGCCTTACCCCGGATCA
GATGAAGTCTGAGCCGAAGCCAGAGGTTGTTTGATACCCTGCTACGCTCT
TTCTTATTCGGATTGCCGGCAGTATCGCATCGCTATTGTCCATCGATCAT
GATTCCAAGAACGTCGAGATCGCCATTGCTGTATACGAGTTGATTGGTCT
TGCCCCTTTTTTGTTGACCTACGTCGGAGTTCTAAGACAAATATGGGCGC
TGTAACCTACCGTGATGGCATTGCTATCTTACAACTTGTTATCTTTCCCT
TTATCTTCGCCGCGTGATGTTAATCAAGTAGTACCAGTCAGATGGCTTAA
TCTTGTGTCTCTAGTCGGTATCATCGGTCTCATTATTGGTATTGCTGGAG
TCAGCACCGCCGATGACAACGGAGGCAGCTACCAGCCAACAACCACCGTC
AAAGCTTCCATGGGAATCTTCATTGTTCTTTTCGTGATCTATTATCTGAT
CGCCGCGTTCATGTTCCTCCAGCTGTGTGATTTGAAGGCGTCCCAGAAGA
AGTTGTTTCTTGCTATTATCCTCTCCACGCCTTTCATCTTGGTCCGCGTG
GTCTACGCAGCGATCGGCGATTTCACCACCATCGAGCGGTTCTCGATCAT
CAGCGTTAACGGAAGCCCCACTATCTACTTGGTCATGGATGTGCTGGAAG
AGATTGTTGCCATGGCTATCACGATGTTTCTTGGCATGTCGGCTGTGCTG
GACCCTGACTTTGTGCGCCTTACCCCGGATCAGATGAAGTCTGAGCCGAA
GCCAGAGGTTGTTTGATACCCTGCTACGCTCTTTCTTATTCGGATTGCCG
GCAGTATCGCATCGCTATTGTCCATCGATCATGATTCCAAGAACGTCGAG
ATCGCCATTGCTGTATACGAGTTGATTGGTCTTGCCCCTTTTTTGTTGAC
CTACGTCGGAGTTCTAAGACAAATATGGGCGCTGTAACCTACCGTGATGG
CATTGCTATCTTACAACTTGTTATCTTTCCCTTTATCTTCGCCGCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_41700CAN33_41700Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41700-T1CAN33_41700-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41700-T1.cdsCAN33_41700-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41700-T1.exon3CAN33_41700-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_41700-T1.exon2CAN33_41700-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_41700-T1.exon1CAN33_41700-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3483189..3484029 -
Powered by Drupal