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CAN33_41710-T1, CAN33_41710-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41710-T1
Unique NameCAN33_41710-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3491423..3492136-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41710-T1 ID=CAN33_41710-T1|Name=CAN33_41710-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=714bp|location=Sequence derived from alignment at NKJJ01000017.1:3491423..3492136- (Aspergillus niger FDAARGOS_311)
ATGTCAGATCGCGAATTTAGTGGTACGTTCTTTGCCAGATTACTTCCTGG
CGCGATATTATGATGTCAAGCTAACTTGCGATTTTCCTAGCGAACGACGA
CTTGTCGCTACCTAAAGGTATGTCGCCTTCCGCCGTGTTGTCGCGTCGCA
TCGACTCCCCCACTTTTGAGGGCAGTGGGACTCGTCGCCCTTTGATTTGC
CTACCTCGGACTCAGTATAAAATATAATCAAATATCCATTATATACTAAA
TCGCAAACCATACTCACAGCGACGGTCCAAAAGATCATCACCGAGATCCT
ACCTCCTTCATCCGGCCAGACATTCTCCAAAGATGCTCGCGATCTCCTCA
TGGAATGCTGCGTTGAATTCATCACTTTGATCTCCTCCGAAGCCAATGAT
ATCAGTGAAAAGGAAGCCAAGAAGACCATCGCCTGCGAACATGTCGAGCG
CGCCCTCCGTGATCTCGGTTTCAGCGACTACATTCCCGATGTCCTTGCTG
TCGCAGAGGAACACAAAGAGCAGTTGAAGGTATGTGGCTGATACCATTAC
CTTGTTTGTGGCATTGTCCGGCTAACACAGATCGATTACACTAGTCGCGA
GAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAGCT
TCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGTATCACG
CTGCTCCGGAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:3491423..3492136-

>CAN33_41710-T1 ID=CAN33_41710-T1|Name=CAN33_41710-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1716bp|location=Sequence derived from alignment at NKJJ01000017.1:3491423..3492136- (Aspergillus niger FDAARGOS_311)
TCGCGAGAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGA
GGAGCTTCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGT
ATCACGCTGCTCCGGAGTGACGACGGTCCAAAAGATCATCACCGAGATCC
TACCTCCTTCATCCGGCCAGACATTCTCCAAAGATGCTCGCGATCTCCTC
ATGGAATGCTGCGTTGAATTCATCACTTTGATCTCCTCCGAAGCCAATGA
TATCAGTGAAAAGGAAGCCAAGAAGACCATCGCCTGCGAACATGTCGAGC
GCGCCCTCCGTGATCTCGGTTTCAGCGACTACATTCCCGATGTCCTTGCT
GTCGCAGAGGAACACAAAGAGCAGTTGAAGCGAACGACGACTTGTCGCTA
CCTAAAGATGTCAGATCGCGAATTTAGTGTCGCGAGAGAAGAAGCAGAGC
AAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAGCTTCTACGGCAGCAACA
GGAGTTGTTCCGCTCAGCTACTGAGAAGTATCACGCTGCTCCGGAGTGAC
GACGGTCCAAAAGATCATCACCGAGATCCTACCTCCTTCATCCGGCCAGA
CATTCTCCAAAGATGCTCGCGATCTCCTCATGGAATGCTGCGTTGAATTC
ATCACTTTGATCTCCTCCGAAGCCAATGATATCAGTGAAAAGGAAGCCAA
GAAGACCATCGCCTGCGAACATGTCGAGCGCGCCCTCCGTGATCTCGGTT
TCAGCGACTACATTCCCGATGTCCTTGCTGTCGCAGAGGAACACAAAGAG
CAGTTGAAGCGAACGACGACTTGTCGCTACCTAAAGATGTCAGATCGCGA
ATTTAGTGTCGCGAGAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTTG
TCCGAGGAGGAGCTTCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTAC
TGAGAAGTATCACGCTGCTCCGGAGTGACGACGGTCCAAAAGATCATCAC
CGAGATCCTACCTCCTTCATCCGGCCAGACATTCTCCAAAGATGCTCGCG
ATCTCCTCATGGAATGCTGCGTTGAATTCATCACTTTGATCTCCTCCGAA
GCCAATGATATCAGTGAAAAGGAAGCCAAGAAGACCATCGCCTGCGAACA
TGTCGAGCGCGCCCTCCGTGATCTCGGTTTCAGCGACTACATTCCCGATG
TCCTTGCTGTCGCAGAGGAACACAAAGAGCAGTTGAAGCGAACGACGACT
TGTCGCTACCTAAAGATGTCAGATCGCGAATTTAGTGTCGCGAGAGAAGA
AGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAGCTTCTACGG
CAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGTATCACGCTGCTCC
GGAGTGACGACGGTCCAAAAGATCATCACCGAGATCCTACCTCCTTCATC
CGGCCAGACATTCTCCAAAGATGCTCGCGATCTCCTCATGGAATGCTGCG
TTGAATTCATCACTTTGATCTCCTCCGAAGCCAATGATATCAGTGAAAAG
GAAGCCAAGAAGACCATCGCCTGCGAACATGTCGAGCGCGCCCTCCGTGA
TCTCGGTTTCAGCGACTACATTCCCGATGTCCTTGCTGTCGCAGAGGAAC
ACAAAGAGCAGTTGAAGCGAACGACGACTTGTCGCTACCTAAAGATGTCA
GATCGCGAATTTAGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NCB2CAN33_41710Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41710-T1CAN33_41710-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41710-T1.cdsCAN33_41710-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41710-T1.exon4CAN33_41710-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_41710-T1.exon3CAN33_41710-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_41710-T1.exon2CAN33_41710-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_41710-T1.exon1CAN33_41710-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR003958
DBxrefPFAM:PF00125
DBxrefPFAM:PF00808
Productnegative cofactor 2 transcription regulator complex subunit ncb2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3491423..3492136 -
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