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CAN33_41715-T1, CAN33_41715-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41715-T1
Unique NameCAN33_41715-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3492944..3493925-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41715-T1 ID=CAN33_41715-T1|Name=CAN33_41715-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=982bp|location=Sequence derived from alignment at NKJJ01000017.1:3492944..3493925- (Aspergillus niger FDAARGOS_311)
ATGTCCAAGACCATCATCGTTACCGGAGCCTCAAGAGGTAATCCTATCCA
GCCCGTCCACGTTTCCATTGCAAACTCAACTCTACGAGCAAGCCACTGAT
CAGGCACACACAATCAGGAATCGGCCTCGCCATCACGAAATACCTCCTCA
CGGCGCCCCAATCCCACAATGTTGTCGTGATCGCCCGCAGCCGTGAACCC
CTCGAGAAGCTTAAGGAGCAATACAGCAAGCAAGTCGAGGTGCTCAATGG
CGACCTGGCTGACTTCTCCATCGGTCAGAAGGCCGTGGACCTGGCTCTCA
GGTCCTTCGGTCGTCTGGACGGCATGGTCCTCAACCACGGCATGCTTGGA
CAAGTAGGCAAGGTCAAGGACGCGGATTTCGAGCAGTGGAAGCACGGATT
CGACGTGAACTTTATCAGTCTTGTTGCTTTTGTGAGTACGAGTCTTTCAA
CCCTATGGCAGATAGCGGTACATGACTGGACCTGGATAGCTGACGCATTG
GGTGTTTATCATCTGCTTAGATCAAAGCCGGTCTTCCCGCCCTCCGTGAG
TCCAAGGGAAAAATCATCTTCACTTCGTCGGGTGCTGCCGTCTCTGCCTA
CAGGGGCTGGGCTCTCTACGGTGCGACGAAGGCGGCCATGAACCATCTCG
CCTTGAGCTTGGGAGAGGAAGAACCCGAGGTTACTACAATTTCGATCAGG
CCTGGCATGGTTGACACCGAGATGCAGCGGGAGCTACGCGAGGACCATGC
TACGACCTTGGAGCCGCAGATGCATGCCAAGTTTACGACGGTCCACAAGG
AGGGCAAGCTCCTCAAGCCAGAGCAGCCGGGTCATGTTATGGCCAAGCTG
GTTTTGGACGCTCCTAACGAGCTTACTGGGAAGTTCTTCACGTGAGTGAT
TTGAAATTTCTTCATTTCTGGAAAAAAGCTAACAGGTATAACTAGGTGGA
ACGACAAGGCTCTGGAGGCATTCCAGGCGTAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:3492944..3493925-

>CAN33_41715-T1 ID=CAN33_41715-T1|Name=CAN33_41715-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3036bp|location=Sequence derived from alignment at NKJJ01000017.1:3492944..3493925- (Aspergillus niger FDAARGOS_311)
GTGGAACGACAAGGCTCTGGAGGCATTCCAGGCGTAGATCAAAGCCGGTC
TTCCCGCCCTCCGTGAGTCCAAGGGAAAAATCATCTTCACTTCGTCGGGT
GCTGCCGTCTCTGCCTACAGGGGCTGGGCTCTCTACGGTGCGACGAAGGC
GGCCATGAACCATCTCGCCTTGAGCTTGGGAGAGGAAGAACCCGAGGTTA
CTACAATTTCGATCAGGCCTGGCATGGTTGACACCGAGATGCAGCGGGAG
CTACGCGAGGACCATGCTACGACCTTGGAGCCGCAGATGCATGCCAAGTT
TACGACGGTCCACAAGGAGGGCAAGCTCCTCAAGCCAGAGCAGCCGGGTC
ATGTTATGGCCAAGCTGGTTTTGGACGCTCCTAACGAGCTTACTGGGAAG
TTCTTCACGAATCGGCCTCGCCATCACGAAATACCTCCTCACGGCGCCCC
AATCCCACAATGTTGTCGTGATCGCCCGCAGCCGTGAACCCCTCGAGAAG
CTTAAGGAGCAATACAGCAAGCAAGTCGAGGTGCTCAATGGCGACCTGGC
TGACTTCTCCATCGGTCAGAAGGCCGTGGACCTGGCTCTCAGGTCCTTCG
GTCGTCTGGACGGCATGGTCCTCAACCACGGCATGCTTGGACAAGTAGGC
AAGGTCAAGGACGCGGATTTCGAGCAGTGGAAGCACGGATTCGACGTGAA
CTTTATCAGTCTTGTTGCTTTTATGTCCAAGACCATCATCGTTACCGGAG
CCTCAAGAGGTGGAACGACAAGGCTCTGGAGGCATTCCAGGCGTAGATCA
AAGCCGGTCTTCCCGCCCTCCGTGAGTCCAAGGGAAAAATCATCTTCACT
TCGTCGGGTGCTGCCGTCTCTGCCTACAGGGGCTGGGCTCTCTACGGTGC
GACGAAGGCGGCCATGAACCATCTCGCCTTGAGCTTGGGAGAGGAAGAAC
CCGAGGTTACTACAATTTCGATCAGGCCTGGCATGGTTGACACCGAGATG
CAGCGGGAGCTACGCGAGGACCATGCTACGACCTTGGAGCCGCAGATGCA
TGCCAAGTTTACGACGGTCCACAAGGAGGGCAAGCTCCTCAAGCCAGAGC
AGCCGGGTCATGTTATGGCCAAGCTGGTTTTGGACGCTCCTAACGAGCTT
ACTGGGAAGTTCTTCACGAATCGGCCTCGCCATCACGAAATACCTCCTCA
CGGCGCCCCAATCCCACAATGTTGTCGTGATCGCCCGCAGCCGTGAACCC
CTCGAGAAGCTTAAGGAGCAATACAGCAAGCAAGTCGAGGTGCTCAATGG
CGACCTGGCTGACTTCTCCATCGGTCAGAAGGCCGTGGACCTGGCTCTCA
GGTCCTTCGGTCGTCTGGACGGCATGGTCCTCAACCACGGCATGCTTGGA
CAAGTAGGCAAGGTCAAGGACGCGGATTTCGAGCAGTGGAAGCACGGATT
CGACGTGAACTTTATCAGTCTTGTTGCTTTTATGTCCAAGACCATCATCG
TTACCGGAGCCTCAAGAGGTGGAACGACAAGGCTCTGGAGGCATTCCAGG
CGTAGATCAAAGCCGGTCTTCCCGCCCTCCGTGAGTCCAAGGGAAAAATC
ATCTTCACTTCGTCGGGTGCTGCCGTCTCTGCCTACAGGGGCTGGGCTCT
CTACGGTGCGACGAAGGCGGCCATGAACCATCTCGCCTTGAGCTTGGGAG
AGGAAGAACCCGAGGTTACTACAATTTCGATCAGGCCTGGCATGGTTGAC
ACCGAGATGCAGCGGGAGCTACGCGAGGACCATGCTACGACCTTGGAGCC
GCAGATGCATGCCAAGTTTACGACGGTCCACAAGGAGGGCAAGCTCCTCA
AGCCAGAGCAGCCGGGTCATGTTATGGCCAAGCTGGTTTTGGACGCTCCT
AACGAGCTTACTGGGAAGTTCTTCACGAATCGGCCTCGCCATCACGAAAT
ACCTCCTCACGGCGCCCCAATCCCACAATGTTGTCGTGATCGCCCGCAGC
CGTGAACCCCTCGAGAAGCTTAAGGAGCAATACAGCAAGCAAGTCGAGGT
GCTCAATGGCGACCTGGCTGACTTCTCCATCGGTCAGAAGGCCGTGGACC
TGGCTCTCAGGTCCTTCGGTCGTCTGGACGGCATGGTCCTCAACCACGGC
ATGCTTGGACAAGTAGGCAAGGTCAAGGACGCGGATTTCGAGCAGTGGAA
GCACGGATTCGACGTGAACTTTATCAGTCTTGTTGCTTTTATGTCCAAGA
CCATCATCGTTACCGGAGCCTCAAGAGGTGGAACGACAAGGCTCTGGAGG
CATTCCAGGCGTAGATCAAAGCCGGTCTTCCCGCCCTCCGTGAGTCCAAG
GGAAAAATCATCTTCACTTCGTCGGGTGCTGCCGTCTCTGCCTACAGGGG
CTGGGCTCTCTACGGTGCGACGAAGGCGGCCATGAACCATCTCGCCTTGA
GCTTGGGAGAGGAAGAACCCGAGGTTACTACAATTTCGATCAGGCCTGGC
ATGGTTGACACCGAGATGCAGCGGGAGCTACGCGAGGACCATGCTACGAC
CTTGGAGCCGCAGATGCATGCCAAGTTTACGACGGTCCACAAGGAGGGCA
AGCTCCTCAAGCCAGAGCAGCCGGGTCATGTTATGGCCAAGCTGGTTTTG
GACGCTCCTAACGAGCTTACTGGGAAGTTCTTCACGAATCGGCCTCGCCA
TCACGAAATACCTCCTCACGGCGCCCCAATCCCACAATGTTGTCGTGATC
GCCCGCAGCCGTGAACCCCTCGAGAAGCTTAAGGAGCAATACAGCAAGCA
AGTCGAGGTGCTCAATGGCGACCTGGCTGACTTCTCCATCGGTCAGAAGG
CCGTGGACCTGGCTCTCAGGTCCTTCGGTCGTCTGGACGGCATGGTCCTC
AACCACGGCATGCTTGGACAAGTAGGCAAGGTCAAGGACGCGGATTTCGA
GCAGTGGAAGCACGGATTCGACGTGAACTTTATCAGTCTTGTTGCTTTTA
TGTCCAAGACCATCATCGTTACCGGAGCCTCAAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_41715CAN33_41715Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41715-T1CAN33_41715-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41715-T1.cdsCAN33_41715-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41715-T1.exon4CAN33_41715-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_41715-T1.exon3CAN33_41715-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_41715-T1.exon2CAN33_41715-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_41715-T1.exon1CAN33_41715-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3492944..3493925 -
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