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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:3557776..3559420+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_41850-T1 ID=CAN33_41850-T1|Name=CAN33_41850-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1645bp|location=Sequence derived from alignment at NKJJ01000017.1:3557776..3559420+ (Aspergillus niger FDAARGOS_311)
ATGCAGGTTTCTGGAACCACCGTCGGCACGGTGCCGTATGAGTCCATGGC
TGGAAAGCTGGACTCTAAGCTTCTCCAAGCTCTGAATGTCTTGGGGTTCA
CCCATATGACGCCCGTTCAGCAACGGGTGCTAACTGAACTGCCAGATTGG
CGCAGTGACTGCCTCGTCCAGGCTAAGACTGGTACCGGCAAAACGTTGGC
TTTCCTCCTGCCCACATTGCACTGCCTTCTTGATGGCTCTATGGCACCGC
CCAGAGGCCAGGTCGCTGTCTTGATCGTTACCCCTACGCGTGAACTGGCC
CAGCAGATTGCCAAGTCATGTGATCAACTGACATCGCAAATGGCAGTACC
TCTGAAGTGCGACATTGCTGTTGGTGGAACCGCTCGGGCTTCTGCTTTCT
CGCGCTTCATGAGAGAGGCCCCTCTGTTCTTGTAGCAACTCCAGGACGGT
TGAAAGATTACCTGTCCGAGCCTGAGGCGGCCATCAAGCTGTCTAACATC
AAGACCCTGATTCTGGACGAGGCTGATACGATGCTCGAGAGTGGCTTCCT
AGCTGATGTGAAGCACATTATCAGACACATTCCCCCCAAAAGCGCCGGAT
GGCAGGGAATGTGCTTCTCTGCCACTCTTCCCCCAAAGTTAGGGATGTGG
TCAGCGTTGTGCTCAAGCCAGGCTACAGTAGCATTTCTACTATTGATGAA
AACGAAACCCCAACGCATGAGAGAGTCCCCCAGTATCATGTACTGATGCC
GTCTGTGGCAGATTCTTTTACCACTCTTGCCTCCGTTCTCCAGTTGGAAA
CGAAGAACAGTTCGAAGATTATCGTTTTTGGCGTCACGGCAAACATGGTC
AGTCTCTTCGCGGCTGCCTTTTCTCGGGGCTTGACGAAGTTGAGTGTATT
TGAGATCCATTCCCGACTCAGTCAGAGCGCTCGCACCAAGACTACCGCTC
AGTTCAAGGAAGCTGCCGCTGGAATCCTCTTTGCGTCCGACGTCATTGGC
CGTGGCATGGATTTCCCCAACGTCGACTTGGTCATCCAGGTTGGCTTGCC
GACAAACGGTGAACAATACGTTCACCGTGTCGGCCGTACAGCCCGTGCTG
GCAATGATGGCCGCGCCATTATCCTTCTTACCGAAGCGGAGACTTTCTTC
CTGAGAAACAATCGCCACTTGCCCATCCAGCCTCACCCCCAGACCGACGC
CATCATCGAGGCAGCTGCCTCGTATGCAGATACTGTCGCAGAAGCTATGT
ACACGATTGACGAAGAGAAGAAGCAACGCGCCTACTCGTCTTTCATCGGT
TTCTTTGCTGGATCGGGGCTCCTGAAGCAGCTTCGTCTCGACAAAACGGG
TCTTGTTCAGATGGCCAACGACATGGCTATCCAAGGCATGGCATGTCCTG
AGCCTCCTGTCATCGACAAGAAGATCGTCGGCAAGATGGGCTTGAAGGGT
ATTCCGGGATTCAATTATGGAAACGGGGGTAGCTCGGTTCGAGGTGCTTC
TTCTGCGCCGCGTGGTCGTCCTGGTGGCAAGCGCGATGCCAGTGCCGGTG
GACCAGGCGAGGGCAGAGGTGGTTTTGAGAAGAGACAAAAGAGTACGCGC
GGCAGGGGCCGTGGAAGACGTGGAGGGGATCAAAGAGCAGCGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:3557776..3559420+ >CAN33_41850-T1 ID=CAN33_41850-T1|Name=CAN33_41850-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4176bp|location=Sequence derived from alignment at NKJJ01000017.1:3557776..3559420+ (Aspergillus niger FDAARGOS_311)
ATGCAGGTTTCTGGAACCACCGTCGGCACGGTGCCGTATGAGTCCATGGC
TGGAAAGCTGGACTCTAAGCTTCTCCAAGCTCTGAATGTCTTGGGGTTCA
CCCATATGACGCCCGTTCAGCAACGGGTGCTAACTGAACTGCCAGATTGG
CGCAGTGACTGCCTCGTCCAGGCTAAGACTGGTACCGGCAAAACGTTGGC
TTTCCTCCTGCCCACATTGCACTGCCTTCTTGATGGCTCTATGGCACCGC
CCAGAGGCCAGGTCGCTGTCTTGATCGTTACCCCTACGCGTGAACTGGCC
CAGCAGATTGCCAATACCTCTGAAGTGCGACATTGCTGTTGGTGGAACCG
CTCGGGCTTCTGCTTTCTCGCGCTTCATGAGAGAGGCCCCTCTGTTCTTG
TAGCAACTCCAGGACGGTTGAAAGATTACCTGTCCGAGCCTGAGGCGGCC
ATCAAGCTGTCTAACATCAAGACCCTGATTCTGGACGAGGCTGATACGAT
GCTCGAGAATTCTTTTACCACTCTTGCCTCCGTTCTCCAGTTGGAAACGA
AGAACAGTTCGAAGATTATCGTTTTTGGCGTCACGGCAAACATGGTCAGT
CTCTTCGCGGCTGCCTTTTCTCGGGGCTTGACGAAGTTGAGTGTATTTGA
GATCCATTCCCGACTCAGTCAGAGCGCTCGCACCAAGACTACCGCTCAGT
TCAAGGAAGCTGCCGCTGGAATCCTCTTTGCGTCCGACGTCATTGGCCGT
GGCATGGATTTCCCCAACGTCGACTTGGTCATCCAGGTTGGCTTGCCGAC
AAACGGTGAACAATACGTTCACCGTGTCGGCCGTACAGCCCGTGCTGGCA
ATGATGGCCGCGCCATTATCCTTCTTACCGAAGCGGAGACTTTCTTCCTG
AGAAACAATCGCCACTTGCCCATCCAGCCTCACCCCCAGACCGACGCCAT
CATCGAGGCAGCTGCCTCGTATGCAGATACTGTCGCAGAAGCTATGTACA
CGATTGACGAAGAGAAGAAGCAACGCGCCTACTCGTCTTTCATCGGTTTC
TTTGCTGGATCGGGGCTCCTGAAGCAGCTTCGTCTCGACAAAACGGGTCT
TGTTCAGATGGCCAACGACATGGCTATCCAAGGCATGGCATGTCCTGAGC
CTCCTGTCATCGACAAGAAGATCGTCGGCAAGATGGGCTTGAAGGGTATT
CCGGGATTCAATTATGGAAACGGGGGTAGCTCGGTTCGAGGTGCTTCTTC
TGCGCCGCGTGGTCGTCCTGGTGGCAAGCGCGATGCCAGTGCCGGTGGAC
CAGGCGAGGGCAGAGGTGGTTTTGAGAAGAGACAAAAGAGTACGCGCGGC
AGGGGCCGTGGAAGACGTGGAGGGGATCAAAGAGCAGCGTAAATGCAGGT
TTCTGGAACCACCGTCGGCACGGTGCCGTATGAGTCCATGGCTGGAAAGC
TGGACTCTAAGCTTCTCCAAGCTCTGAATGTCTTGGGGTTCACCCATATG
ACGCCCGTTCAGCAACGGGTGCTAACTGAACTGCCAGATTGGCGCAGTGA
CTGCCTCGTCCAGGCTAAGACTGGTACCGGCAAAACGTTGGCTTTCCTCC
TGCCCACATTGCACTGCCTTCTTGATGGCTCTATGGCACCGCCCAGAGGC
CAGGTCGCTGTCTTGATCGTTACCCCTACGCGTGAACTGGCCCAGCAGAT
TGCCAATACCTCTGAAGTGCGACATTGCTGTTGGTGGAACCGCTCGGGCT
TCTGCTTTCTCGCGCTTCATGAGAGAGGCCCCTCTGTTCTTGTAGCAACT
CCAGGACGGTTGAAAGATTACCTGTCCGAGCCTGAGGCGGCCATCAAGCT
GTCTAACATCAAGACCCTGATTCTGGACGAGGCTGATACGATGCTCGAGA
ATTCTTTTACCACTCTTGCCTCCGTTCTCCAGTTGGAAACGAAGAACAGT
TCGAAGATTATCGTTTTTGGCGTCACGGCAAACATGGTCAGTCTCTTCGC
GGCTGCCTTTTCTCGGGGCTTGACGAAGTTGAGTGTATTTGAGATCCATT
CCCGACTCAGTCAGAGCGCTCGCACCAAGACTACCGCTCAGTTCAAGGAA
GCTGCCGCTGGAATCCTCTTTGCGTCCGACGTCATTGGCCGTGGCATGGA
TTTCCCCAACGTCGACTTGGTCATCCAGGTTGGCTTGCCGACAAACGGTG
AACAATACGTTCACCGTGTCGGCCGTACAGCCCGTGCTGGCAATGATGGC
CGCGCCATTATCCTTCTTACCGAAGCGGAGACTTTCTTCCTGAGAAACAA
TCGCCACTTGCCCATCCAGCCTCACCCCCAGACCGACGCCATCATCGAGG
CAGCTGCCTCGTATGCAGATACTGTCGCAGAAGCTATGTACACGATTGAC
GAAGAGAAGAAGCAACGCGCCTACTCGTCTTTCATCGGTTTCTTTGCTGG
ATCGGGGCTCCTGAAGCAGCTTCGTCTCGACAAAACGGGTCTTGTTCAGA
TGGCCAACGACATGGCTATCCAAGGCATGGCATGTCCTGAGCCTCCTGTC
ATCGACAAGAAGATCGTCGGCAAGATGGGCTTGAAGGGTATTCCGGGATT
CAATTATGGAAACGGGGGTAGCTCGGTTCGAGGTGCTTCTTCTGCGCCGC
GTGGTCGTCCTGGTGGCAAGCGCGATGCCAGTGCCGGTGGACCAGGCGAG
GGCAGAGGTGGTTTTGAGAAGAGACAAAAGAGTACGCGCGGCAGGGGCCG
TGGAAGACGTGGAGGGGATCAAAGAGCAGCGTAAATGCAGGTTTCTGGAA
CCACCGTCGGCACGGTGCCGTATGAGTCCATGGCTGGAAAGCTGGACTCT
AAGCTTCTCCAAGCTCTGAATGTCTTGGGGTTCACCCATATGACGCCCGT
TCAGCAACGGGTGCTAACTGAACTGCCAGATTGGCGCAGTGACTGCCTCG
TCCAGGCTAAGACTGGTACCGGCAAAACGTTGGCTTTCCTCCTGCCCACA
TTGCACTGCCTTCTTGATGGCTCTATGGCACCGCCCAGAGGCCAGGTCGC
TGTCTTGATCGTTACCCCTACGCGTGAACTGGCCCAGCAGATTGCCAATA
CCTCTGAAGTGCGACATTGCTGTTGGTGGAACCGCTCGGGCTTCTGCTTT
CTCGCGCTTCATGAGAGAGGCCCCTCTGTTCTTGTAGCAACTCCAGGACG
GTTGAAAGATTACCTGTCCGAGCCTGAGGCGGCCATCAAGCTGTCTAACA
TCAAGACCCTGATTCTGGACGAGGCTGATACGATGCTCGAGAATTCTTTT
ACCACTCTTGCCTCCGTTCTCCAGTTGGAAACGAAGAACAGTTCGAAGAT
TATCGTTTTTGGCGTCACGGCAAACATGGTCAGTCTCTTCGCGGCTGCCT
TTTCTCGGGGCTTGACGAAGTTGAGTGTATTTGAGATCCATTCCCGACTC
AGTCAGAGCGCTCGCACCAAGACTACCGCTCAGTTCAAGGAAGCTGCCGC
TGGAATCCTCTTTGCGTCCGACGTCATTGGCCGTGGCATGGATTTCCCCA
ACGTCGACTTGGTCATCCAGGTTGGCTTGCCGACAAACGGTGAACAATAC
GTTCACCGTGTCGGCCGTACAGCCCGTGCTGGCAATGATGGCCGCGCCAT
TATCCTTCTTACCGAAGCGGAGACTTTCTTCCTGAGAAACAATCGCCACT
TGCCCATCCAGCCTCACCCCCAGACCGACGCCATCATCGAGGCAGCTGCC
TCGTATGCAGATACTGTCGCAGAAGCTATGTACACGATTGACGAAGAGAA
GAAGCAACGCGCCTACTCGTCTTTCATCGGTTTCTTTGCTGGATCGGGGC
TCCTGAAGCAGCTTCGTCTCGACAAAACGGGTCTTGTTCAGATGGCCAAC
GACATGGCTATCCAAGGCATGGCATGTCCTGAGCCTCCTGTCATCGACAA
GAAGATCGTCGGCAAGATGGGCTTGAAGGGTATTCCGGGATTCAATTATG
GAAACGGGGGTAGCTCGGTTCGAGGTGCTTCTTCTGCGCCGCGTGGTCGT
CCTGGTGGCAAGCGCGATGCCAGTGCCGGTGGACCAGGCGAGGGCAGAGG
TGGTTTTGAGAAGAGACAAAAGAGTACGCGCGGCAGGGGCCGTGGAAGAC
GTGGAGGGGATCAAAGAGCAGCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | DEAD/DEAH box helicase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:3557776..3559420 + |
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