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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:3770836..3772776- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_42180-T1 ID=CAN33_42180-T1|Name=CAN33_42180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1941bp|location=Sequence derived from alignment at NKJJ01000017.1:3770836..3772776- (Aspergillus niger FDAARGOS_311)
ATGGGAATACCATTCCTCACACGTCATTTGTATCCGTTTGCGGAGACCAT
CGTATTCGGAGAGCCTCAGAAAGTCCAGCGCAAACAAACAGAATATGTCG
AGGCTGTTGTAATAGATGGACCGAGTCTTGTTTACCATGTCTCCATGCGC
CTGCTATCGCTGTCCAATGGTTCATCACAGCCAACATGCGATGAAGTGAG
TTGTGCGGTAATGGTCTATCTCCTGCAACTGAGCATGCTCGGCGTAAAAA
TGTACAGTATATAATACCGCTGTGCTTCCTATAATAGGCCTTGTTGAAAC
TAAATTTATGTTAGACACAAGATATGCTTTGATGGGGCCTTACCCGATGA
GAAGCGGGAAACGCGTCTTGCTCGACTGGAGAGGTCAAGGAAAAGACTCG
TGACGCTCCGGACCAATTCACCGCACTGCTTTCAAAAGTCTAGTAGCCCA
CTCAGGCCTCGCTCAATAAGCCCAAAGAACATTTTGCAGAGACGGAGTCT
ACCGGCAAAATATGCTAATATTCCCGAGAATCCCTTCATCGTTCCTGCGG
TTTTCGAAGATCTCAAACATCGATGGTGCAAGAAGAACATAAATAGCGTG
GTCAAAAACGTTCCAGACCTGAGTACTGCTTCCTTAAGCGACTTCCCCTG
GGGAGATGCTGTCGTGATGGTCCCAGGAGAAGCAGATACATATTGCGCCC
ATGTTGCTAGGCTCACAGGTTGTGCTATACTCACCAATGACTCGGATCTT
CTGCTTCATGACCTTGGGAAACGTGGTTCTGTCGTCCTATTGGATTCAAT
CGAGCCATGGACGTACGACGCCTCTCAACATGGGCATCCCCTGATACGAG
CTTTGAGACTGTGTCCAGATCAAGTTGCCCGCCGGCTAGGTCTGACAAGC
TTGCTTCCTTTAGCTTACGAGTTGAAAATCCATCCTGACACTGGTTTAAA
GCAGCTAATACAGCAAGCAAAGGATACAGACGACTCCACCGAACATAAAC
CGGGATATTGTCAATTTGCAGAAGAATACCAGAGCAGTCCGAGTCTTGAC
CAGGAAACGCTATATGAAAGCTATCCCCAACACCTTGATCCAAGGATATC
AGAGCTATTTTCATTGCGTGGAAGAATCCGGGACTCCTCGGGACAATTAT
GCATGTATCTCGTCGTTTTGAACGAGGATCCTGCGAGACAATGTGCATGG
GCCCAGGGCAAGCTGTATAGAAGCATGGGGTATTCCGCTCTCAATCTATC
TTTCTCTGACGACGAAAATTGTGATTTCGTCGACGAGTATGTACGACGAG
GAAGTAGAATTACAACAGACCGCATCTCACTGGGAAATAGGGAGTGGCTT
CTGCTGGAAATGAATTCACTATGTCTACTTTTGGACACAGTACATCTTCA
ATCAGAGCTTGAAATTGCTTCGCCAGCATATTGGAGAATCCTCGCCTTAT
ATATAATCCACTATGAGCAAACCGGTTCTGCTATCAATCATACAGAACGT
CTAAGGCGACTGTTAATGCTGGGATACGGTGACAATCTTGATTGGGTTGA
TGTCCATCTAATAGCGCAGATGCAATCCGTGCTGTATTCCTTGAGAATTC
TCGGGCAATTACTTGGATTGACCGGGTTTATTGACAATCTAACACTTCGA
ACCAGGACTCTATTGGATAACTTGCCTCCCCTCTCTATCTTGATGAGGCC
TGGACACGAAATGGCCCAGGAATTTCGCACCGGTTGCTCCGTCAATGATC
ATGTAGATCGACTTGTTAAGCTCATGGGAAAATGCTCCGACGAAGACTCT
GCACAATACGTGGCAAGATCGCACACAGATCGAGATGATTCTGTAACCCC
ACCAACAGGGATGAATGGATTTGGGGATGTTCGAGCCCGTCGACCCACCA
GGACGCTAGCTAATATGTACGAACTCCTTCCAGAGCAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:3770836..3772776- >CAN33_42180-T1 ID=CAN33_42180-T1|Name=CAN33_42180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3717bp|location=Sequence derived from alignment at NKJJ01000017.1:3770836..3772776- (Aspergillus niger FDAARGOS_311)
GACTCTATTGGATAACTTGCCTCCCCTCTCTATCTTGATGAGGCCTGGAC
ACGAAATGGCCCAGGAATTTCGCACCGGTTGCTCCGTCAATGATCATGTA
GATCGACTTGTTAAGCTCATGGGAAAATGCTCCGACGAAGACTCTGCACA
ATACGTGGCAAGATCGCACACAGATCGAGATGATTCTGTAACCCCACCAA
CAGGGATGAATGGATTTGGGGATGTTCGAGCCCGTCGACCCACCAGGACG
CTAGCTAATATGTACGAACTCCTTCCAGAGCAATGAAATCCCTTCATCGT
TCCTGCGGTTTTCGAAGATCTCAAACATCGATGGTGCAAGAAGAACATAA
ATAGCGTGGTCAAAAACGTTCCAGACCTGAGTACTGCTTCCTTAAGCGAC
TTCCCCTGGGGAGATGCTGTCGTGATGGTCCCAGGAGAAGCAGATACATA
TTGCGCCCATGTTGCTAGGCTCACAGGTTGTGCTATACTCACCAATGACT
CGGATCTTCTGCTTCATGACCTTGGGAAACGTGGTTCTGTCGTCCTATTG
GATTCAATCGAGCCATGGACGTACGACGCCTCTCAACATGGGCATCCCCT
GATACGAGCTTTGAGACTGTGTCCAGATCAAGTTGCCCGCCGGCTAGGTC
TGACAAGCTTGCTTCCTTTAGCTTACGAGTTGAAAATCCATCCTGACACT
GGTTTAAAGCAGCTAATACAGCAAGCAAAGGATACAGACGACTCCACCGA
ACATAAACCGGGATATTGTCAATTTGCAGAAGAATACCAGAGCAGTCCGA
GTCTTGACCAGGAAACGCTATATGAAAGCTATCCCCAACACCTTGATCCA
AGGATATCAGAGCTATTTTCATTGCGTGGAAGAATCCGGGACTCCTCGGG
ACAATTATGCATGTATCTCGTCGTTTTGAACGAGGATCCTGCGAGACAAT
GTGCATGGGCCCAGGGCAAGCTGTATAGAAGCATGGGGTATTCCGCTCTC
AATCTATCTTTCTCTGACGACGAAAATTGTGATTTCGTCGACGAATGGGA
ATACCATTCCTCACACGTCATTTGTATCCGTTTGCGGAGACCATCGTATT
CGGAGAGCCTCAGAAAGTCCAGCGCAAACAAACAGAATATGTCGAGGCTG
TTGTAATAGATGGACCGAGTCTTGTTTACCATGTCTCCATGCGCCTGCTA
TCGCTGTCCAATGGTTCATCACAGCCAACATGCGATGAAGACTCTATTGG
ATAACTTGCCTCCCCTCTCTATCTTGATGAGGCCTGGACACGAAATGGCC
CAGGAATTTCGCACCGGTTGCTCCGTCAATGATCATGTAGATCGACTTGT
TAAGCTCATGGGAAAATGCTCCGACGAAGACTCTGCACAATACGTGGCAA
GATCGCACACAGATCGAGATGATTCTGTAACCCCACCAACAGGGATGAAT
GGATTTGGGGATGTTCGAGCCCGTCGACCCACCAGGACGCTAGCTAATAT
GTACGAACTCCTTCCAGAGCAATGAAATCCCTTCATCGTTCCTGCGGTTT
TCGAAGATCTCAAACATCGATGGTGCAAGAAGAACATAAATAGCGTGGTC
AAAAACGTTCCAGACCTGAGTACTGCTTCCTTAAGCGACTTCCCCTGGGG
AGATGCTGTCGTGATGGTCCCAGGAGAAGCAGATACATATTGCGCCCATG
TTGCTAGGCTCACAGGTTGTGCTATACTCACCAATGACTCGGATCTTCTG
CTTCATGACCTTGGGAAACGTGGTTCTGTCGTCCTATTGGATTCAATCGA
GCCATGGACGTACGACGCCTCTCAACATGGGCATCCCCTGATACGAGCTT
TGAGACTGTGTCCAGATCAAGTTGCCCGCCGGCTAGGTCTGACAAGCTTG
CTTCCTTTAGCTTACGAGTTGAAAATCCATCCTGACACTGGTTTAAAGCA
GCTAATACAGCAAGCAAAGGATACAGACGACTCCACCGAACATAAACCGG
GATATTGTCAATTTGCAGAAGAATACCAGAGCAGTCCGAGTCTTGACCAG
GAAACGCTATATGAAAGCTATCCCCAACACCTTGATCCAAGGATATCAGA
GCTATTTTCATTGCGTGGAAGAATCCGGGACTCCTCGGGACAATTATGCA
TGTATCTCGTCGTTTTGAACGAGGATCCTGCGAGACAATGTGCATGGGCC
CAGGGCAAGCTGTATAGAAGCATGGGGTATTCCGCTCTCAATCTATCTTT
CTCTGACGACGAAAATTGTGATTTCGTCGACGAATGGGAATACCATTCCT
CACACGTCATTTGTATCCGTTTGCGGAGACCATCGTATTCGGAGAGCCTC
AGAAAGTCCAGCGCAAACAAACAGAATATGTCGAGGCTGTTGTAATAGAT
GGACCGAGTCTTGTTTACCATGTCTCCATGCGCCTGCTATCGCTGTCCAA
TGGTTCATCACAGCCAACATGCGATGAAGACTCTATTGGATAACTTGCCT
CCCCTCTCTATCTTGATGAGGCCTGGACACGAAATGGCCCAGGAATTTCG
CACCGGTTGCTCCGTCAATGATCATGTAGATCGACTTGTTAAGCTCATGG
GAAAATGCTCCGACGAAGACTCTGCACAATACGTGGCAAGATCGCACACA
GATCGAGATGATTCTGTAACCCCACCAACAGGGATGAATGGATTTGGGGA
TGTTCGAGCCCGTCGACCCACCAGGACGCTAGCTAATATGTACGAACTCC
TTCCAGAGCAATGAAATCCCTTCATCGTTCCTGCGGTTTTCGAAGATCTC
AAACATCGATGGTGCAAGAAGAACATAAATAGCGTGGTCAAAAACGTTCC
AGACCTGAGTACTGCTTCCTTAAGCGACTTCCCCTGGGGAGATGCTGTCG
TGATGGTCCCAGGAGAAGCAGATACATATTGCGCCCATGTTGCTAGGCTC
ACAGGTTGTGCTATACTCACCAATGACTCGGATCTTCTGCTTCATGACCT
TGGGAAACGTGGTTCTGTCGTCCTATTGGATTCAATCGAGCCATGGACGT
ACGACGCCTCTCAACATGGGCATCCCCTGATACGAGCTTTGAGACTGTGT
CCAGATCAAGTTGCCCGCCGGCTAGGTCTGACAAGCTTGCTTCCTTTAGC
TTACGAGTTGAAAATCCATCCTGACACTGGTTTAAAGCAGCTAATACAGC
AAGCAAAGGATACAGACGACTCCACCGAACATAAACCGGGATATTGTCAA
TTTGCAGAAGAATACCAGAGCAGTCCGAGTCTTGACCAGGAAACGCTATA
TGAAAGCTATCCCCAACACCTTGATCCAAGGATATCAGAGCTATTTTCAT
TGCGTGGAAGAATCCGGGACTCCTCGGGACAATTATGCATGTATCTCGTC
GTTTTGAACGAGGATCCTGCGAGACAATGTGCATGGGCCCAGGGCAAGCT
GTATAGAAGCATGGGGTATTCCGCTCTCAATCTATCTTTCTCTGACGACG
AAAATTGTGATTTCGTCGACGAATGGGAATACCATTCCTCACACGTCATT
TGTATCCGTTTGCGGAGACCATCGTATTCGGAGAGCCTCAGAAAGTCCAG
CGCAAACAAACAGAATATGTCGAGGCTGTTGTAATAGATGGACCGAGTCT
TGTTTACCATGTCTCCATGCGCCTGCTATCGCTGTCCAATGGTTCATCAC
AGCCAACATGCGATGAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR029060 |
| DBxref | InterPro:IPR039436 |
| DBxref | PFAM:PF12813 |
| Product | XPG domain containing family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:3770836..3772776 - |
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