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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:174907..175453- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_42485-T1 ID=CAN33_42485-T1|Name=CAN33_42485-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=547bp|location=Sequence derived from alignment at NKJJ01000022.1:174907..175453- (Aspergillus niger FDAARGOS_311)
ATGGGTGACGGAAACACGTTTGACAACAGAGACAACACAGTTCACAACCA
GGCTGGTAGTCAGGTTGTTTATGGCAGTATTTATAATAATACTTTCTATG
CCTATGAGCAAGGTATATTATTCGATCAAGCTTCTAATTACTACACTAGT
ACTGACTTCCATGGTCACAGATGGCGTGCAGCATATTGCTGAGGATAAGG
TAGACAAATGAATCGTTCAACACCCATAAATATTACATAGACTAATATAT
CATCTCTTATCTCAGTCCCATCTCGATCAGAAGCTCCTAGAAGCAGCCGG
GAAAGGGGAAACTGCGAAAGTGAAGCATCTACTAGACAACGGGGCAAACG
CTTCGGCTGTGGATTCGCAAGGCCAGACAGTGCTTCACGTCGCTGCATCC
GGGGGACACGATGATATTATCAGCATTCTCTTGAGGCGAGGGGCCGACAA
GCATGCAAGAAACCGCTCTAATCACCGTCCCTCGGAGCTCGCCAGGTTGC
TTGGTCATATTCCCCTGGCGAACAAATTGGAGCTGAACTTGCTTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:174907..175453- >CAN33_42485-T1 ID=CAN33_42485-T1|Name=CAN33_42485-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1269bp|location=Sequence derived from alignment at NKJJ01000022.1:174907..175453- (Aspergillus niger FDAARGOS_311)
TCCCATCTCGATCAGAAGCTCCTAGAAGCAGCCGGGAAAGGGGAAACTGC
GAAAGTGAAGCATCTACTAGACAACGGGGCAAACGCTTCGGCTGTGGATT
CGCAAGGCCAGACAGTGCTTCACGTCGCTGCATCCGGGGGACACGATGAT
ATTATCAGCATTCTCTTGAGGCGAGGGGCCGACAAGCATGCAAGAAACCG
CTCTAATCACCGTCCCTCGGAGCTCGCCAGGTTGCTTGGTCATATTCCCC
TGGCGAACAAATTGGAGCTGAACTTGCTTTGAATGGCGTGCAGCATATTG
CTGAGGATAAGATGGGTGACGGAAACACGTTTGACAACAGAGACAACACA
GTTCACAACCAGGCTGGTAGTCAGGTTGTTTATGGCAGTATTTATAATAA
TACTTTCTATGCCTATGAGCAAGTCCCATCTCGATCAGAAGCTCCTAGAA
GCAGCCGGGAAAGGGGAAACTGCGAAAGTGAAGCATCTACTAGACAACGG
GGCAAACGCTTCGGCTGTGGATTCGCAAGGCCAGACAGTGCTTCACGTCG
CTGCATCCGGGGGACACGATGATATTATCAGCATTCTCTTGAGGCGAGGG
GCCGACAAGCATGCAAGAAACCGCTCTAATCACCGTCCCTCGGAGCTCGC
CAGGTTGCTTGGTCATATTCCCCTGGCGAACAAATTGGAGCTGAACTTGC
TTTGAATGGCGTGCAGCATATTGCTGAGGATAAGATGGGTGACGGAAACA
CGTTTGACAACAGAGACAACACAGTTCACAACCAGGCTGGTAGTCAGGTT
GTTTATGGCAGTATTTATAATAATACTTTCTATGCCTATGAGCAAGTCCC
ATCTCGATCAGAAGCTCCTAGAAGCAGCCGGGAAAGGGGAAACTGCGAAA
GTGAAGCATCTACTAGACAACGGGGCAAACGCTTCGGCTGTGGATTCGCA
AGGCCAGACAGTGCTTCACGTCGCTGCATCCGGGGGACACGATGATATTA
TCAGCATTCTCTTGAGGCGAGGGGCCGACAAGCATGCAAGAAACCGCTCT
AATCACCGTCCCTCGGAGCTCGCCAGGTTGCTTGGTCATATTCCCCTGGC
GAACAAATTGGAGCTGAACTTGCTTTGAATGGCGTGCAGCATATTGCTGA
GGATAAGATGGGTGACGGAAACACGTTTGACAACAGAGACAACACAGTTC
ACAACCAGGCTGGTAGTCAGGTTGTTTATGGCAGTATTTATAATAATACT
TTCTATGCCTATGAGCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | Ankyrin repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:174907..175453 - |
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