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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:322605..323855+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4250-T1 ID=CAN33_4250-T1|Name=CAN33_4250-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1251bp|location=Sequence derived from alignment at NKJJ01000019.1:322605..323855+ (Aspergillus niger FDAARGOS_311)
ATGATTGAGCTCGGTCTTAGTCGCATTGTCCGCCTTCTCCAGCAGACTCC
GCTGACTTGGAAGGCAATCCATATCGCTGGCACCAATGGCAAAGGGTCCA
TCAGCGCTTATCTGTCCCACCTGTTGTCGACAGGTGGTGTTCGCTGTGGC
CGTTTCACCTCCCCGCATCTGATTGATCGTTGGGACTGCATCACCATCGG
CGAGAAAGTCGTCCAAGAGTCGCTCTTCCGGCAGATCGAAGCTAGAGTAA
AGCTTCGAGATCAAACGCTGGGAATCGGTGCGAGCGAGTTTGAGCTACTG
ACCGCAACTGCATTCGAAATATTCAATCATGAGCGCGTTGATATCGGGGT
GGTTGAGGTTGGCATGGGCGGTCGGCTGGACGCAACGAACATCTTGACCG
ACGTCCTGGTCTCGGTCATCGCGAAGATAGGCCTGGACCATCAGTTCCTC
CTCGGCGATACCATTGAAGAAATTGCAAGGGAAAAGGCTGGGATTATGAA
GTCAGGTGTTCCATGTGTTGTCGATGGCACCAATTCGGTTGAAGTGCTCC
GAACCCTCGAAGGTCACATCAAGGAACTCGGCATCGACGCGATCTTCACA
CGCCCTGATACACCTGAATACCACTCCCCATCGCTTGGTCAGCTTTTTGC
TACACTGGATCTCCTACCTCACCAGCGAGCGAACATGTCCTGTGCAGTCT
CGGCTCTGAAACTTGCTTTACCCCGATTCCGTCCCGACATCGACGTCGAT
GCGCTGGTTCCACAACTGTCGAAAGTCGAGTGGCCGGCACGCCTACAGAA
GATTCTTTTGAAACCCTTGGTAGATCGCGAGGAGCCTGTTCTGCTGGATG
GTGCACACAATACTCAGTCGGCGGAGGTTCTCGGAGAGTATGTGGATTAC
AAACTTCGTCCGCAAGGTACGAACGTTACCTGGGTCATCGCGGCATCGCG
CGGTAAGGATATAGAATCCTTGTTTCATTCTATCATCAAGGCGGGCGACC
GAGTTGCCATCACCGCGTTCGGTCCCGTTGATGGCATGCCCTGGGTCAAG
GCCAATGATCCAGAAGAGGTGGCTTCATGTGTCCGATCAATCGCGGGTAT
TGGACAAGTGCAAACCTTTGGGGAAGACATTTCCGGCGCTATCCATTGGG
CTTGTGAACAAGCTAGCGGCGCGCCATTGGTCATCGCTGGCAGCCTCTAC
CTGGCGTCGGATGTTCTACGTCTTCTCCGGGAAGCACAAAAGCAATTATA
A back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:322605..323855+ >CAN33_4250-T1 ID=CAN33_4250-T1|Name=CAN33_4250-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1251bp|location=Sequence derived from alignment at NKJJ01000019.1:322605..323855+ (Aspergillus niger FDAARGOS_311)
ATGATTGAGCTCGGTCTTAGTCGCATTGTCCGCCTTCTCCAGCAGACTCC
GCTGACTTGGAAGGCAATCCATATCGCTGGCACCAATGGCAAAGGGTCCA
TCAGCGCTTATCTGTCCCACCTGTTGTCGACAGGTGGTGTTCGCTGTGGC
CGTTTCACCTCCCCGCATCTGATTGATCGTTGGGACTGCATCACCATCGG
CGAGAAAGTCGTCCAAGAGTCGCTCTTCCGGCAGATCGAAGCTAGAGTAA
AGCTTCGAGATCAAACGCTGGGAATCGGTGCGAGCGAGTTTGAGCTACTG
ACCGCAACTGCATTCGAAATATTCAATCATGAGCGCGTTGATATCGGGGT
GGTTGAGGTTGGCATGGGCGGTCGGCTGGACGCAACGAACATCTTGACCG
ACGTCCTGGTCTCGGTCATCGCGAAGATAGGCCTGGACCATCAGTTCCTC
CTCGGCGATACCATTGAAGAAATTGCAAGGGAAAAGGCTGGGATTATGAA
GTCAGGTGTTCCATGTGTTGTCGATGGCACCAATTCGGTTGAAGTGCTCC
GAACCCTCGAAGGTCACATCAAGGAACTCGGCATCGACGCGATCTTCACA
CGCCCTGATACACCTGAATACCACTCCCCATCGCTTGGTCAGCTTTTTGC
TACACTGGATCTCCTACCTCACCAGCGAGCGAACATGTCCTGTGCAGTCT
CGGCTCTGAAACTTGCTTTACCCCGATTCCGTCCCGACATCGACGTCGAT
GCGCTGGTTCCACAACTGTCGAAAGTCGAGTGGCCGGCACGCCTACAGAA
GATTCTTTTGAAACCCTTGGTAGATCGCGAGGAGCCTGTTCTGCTGGATG
GTGCACACAATACTCAGTCGGCGGAGGTTCTCGGAGAGTATGTGGATTAC
AAACTTCGTCCGCAAGGTACGAACGTTACCTGGGTCATCGCGGCATCGCG
CGGTAAGGATATAGAATCCTTGTTTCATTCTATCATCAAGGCGGGCGACC
GAGTTGCCATCACCGCGTTCGGTCCCGTTGATGGCATGCCCTGGGTCAAG
GCCAATGATCCAGAAGAGGTGGCTTCATGTGTCCGATCAATCGCGGGTAT
TGGACAAGTGCAAACCTTTGGGGAAGACATTTCCGGCGCTATCCATTGGG
CTTGTGAACAAGCTAGCGGCGCGCCATTGGTCATCGCTGGCAGCCTCTAC
CTGGCGTCGGATGTTCTACGTCTTCTCCGGGAAGCACAAAAGCAATTATA
A back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009058 | biosynthetic process |
| GO:0009396 | folic acid-containing compound biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016874 | ligase activity |
| GO:0004326 | tetrahydrofolylpolyglutamate synthase activity |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000191.1 |
| Note | BUSCO:EOG09260KM4 |
| DBxref | InterPro:IPR018109 |
| DBxref | InterPro:IPR013221 |
| DBxref | InterPro:IPR036615 |
| DBxref | InterPro:IPR036565 |
| DBxref | InterPro:IPR001645 |
| DBxref | PFAM:PF08245 |
| Product | bifunctional protein FolC family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:322605..323855 + |
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